Protein–RNA interactions for Protein: O60882

MMP20, Matrix metalloproteinase-20, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP20O60882 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
MMP20O60882 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MMP20O60882 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
MMP20O60882 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
MMP20O60882 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MMP20O60882 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MMP20O60882 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
MMP20O60882 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
MMP20O60882 AC022413.1-201ENST00000624602 984 ntBASIC25.23■■□□□ 1.63
MMP20O60882 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
MMP20O60882 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
MMP20O60882 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
MMP20O60882 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
MMP20O60882 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
MMP20O60882 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
MMP20O60882 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
MMP20O60882 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.2■■□□□ 1.62
MMP20O60882 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
MMP20O60882 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
MMP20O60882 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
MMP20O60882 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
MMP20O60882 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.19■■□□□ 1.62
MMP20O60882 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.19■■□□□ 1.62
MMP20O60882 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MMP20O60882 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MMP20O60882 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MMP20O60882 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
MMP20O60882 AP002414.2-202ENST00000590929 1450 ntBASIC25.18■■□□□ 1.62
MMP20O60882 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.18■■□□□ 1.62
MMP20O60882 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
MMP20O60882 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.18■■□□□ 1.62
MMP20O60882 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
MMP20O60882 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MMP20O60882 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.17■■□□□ 1.62
MMP20O60882 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MMP20O60882 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
MMP20O60882 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
MMP20O60882 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MMP20O60882 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MMP20O60882 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.16■■□□□ 1.62
MMP20O60882 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MMP20O60882 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MMP20O60882 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
MMP20O60882 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.15■■□□□ 1.62
MMP20O60882 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MMP20O60882 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
MMP20O60882 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MMP20O60882 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MMP20O60882 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
MMP20O60882 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
MMP20O60882 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
MMP20O60882 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
MMP20O60882 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
MMP20O60882 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.13■■□□□ 1.61
MMP20O60882 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
MMP20O60882 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
MMP20O60882 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.12■■□□□ 1.61
MMP20O60882 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
MMP20O60882 RNF126P1-201ENST00000567452 1320 ntBASIC25.12■■□□□ 1.61
MMP20O60882 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
MMP20O60882 RARRES2P2-201ENST00000394842 485 ntBASIC25.11■■□□□ 1.61
MMP20O60882 AC060814.1-201ENST00000554326 538 ntBASIC25.11■■□□□ 1.61
MMP20O60882 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.1■■□□□ 1.61
MMP20O60882 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.1■■□□□ 1.61
MMP20O60882 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.1■■□□□ 1.61
MMP20O60882 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
MMP20O60882 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.1■■□□□ 1.61
MMP20O60882 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
MMP20O60882 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
MMP20O60882 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
MMP20O60882 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
MMP20O60882 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
MMP20O60882 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.09■■□□□ 1.61
MMP20O60882 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
MMP20O60882 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.09■■□□□ 1.61
MMP20O60882 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
MMP20O60882 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.08■■□□□ 1.61
MMP20O60882 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
MMP20O60882 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.08■■□□□ 1.6
MMP20O60882 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
MMP20O60882 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
MMP20O60882 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
MMP20O60882 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
MMP20O60882 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
MMP20O60882 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
MMP20O60882 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.06■■□□□ 1.6
MMP20O60882 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.05■■□□□ 1.6
MMP20O60882 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
MMP20O60882 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
MMP20O60882 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
MMP20O60882 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
MMP20O60882 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
MMP20O60882 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
MMP20O60882 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
MMP20O60882 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
MMP20O60882 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
MMP20O60882 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MMP20O60882 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MMP20O60882 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
MMP20O60882 AC126177.7-201ENST00000547904 679 ntBASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms