RNA–Protein interactions for RNA: ENST00000442934.6

MSI2-204, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-204ENST00000442934 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.25■□□□□ 0.351e-6■■■■■ 149.6
MSI2-204ENST00000442934 SF3B1O75533 1304 aaKnown RBP eCLIP16.75■□□□□ 0.279e-7■■■■■ 144
MSI2-204ENST00000442934 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.51■□□□□ 0.075e-6■■■■■ 105.1
MSI2-204ENST00000442934 AGGF1Q8N302 714 aaeCLIP16.44■□□□□ 0.222e-8■■■■■ 94.2
MSI2-204ENST00000442934 HNRNPLP14866 589 aaKnown RBP eCLIP15.88■□□□□ 0.133e-8■■■■■ 55.5
MSI2-204ENST00000442934 AARSP49588 968 aaKnown RBP eCLIP16.95■□□□□ 0.38e-6■■■■■ 52.4
MSI2-204ENST00000442934 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.98■□□□□ 0.317e-10■■■■■ 48.7
MSI2-204ENST00000442934 DKC1O60832 514 aaKnown RBP eCLIP17.81■□□□□ 0.444e-7■■■■■ 42.5
MSI2-204ENST00000442934 PTBP1P26599 531 aaKnown RBP eCLIP14.25□□□□□ -0.131e-9■■■■■ 36.4
MSI2-204ENST00000442934 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.06■□□□□ 0.162e-6■■■■■ 35.4
MSI2-204ENST00000442934 GTF2F1P35269 517 aaKnown RBP eCLIP17.49■□□□□ 0.395e-7■■■■■ 34.3
MSI2-204ENST00000442934 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.42■□□□□ 0.541e-6■■■■■ 31
MSI2-204ENST00000442934 EIF4G2P78344 907 aaKnown RBP eCLIP22.74■■□□□ 1.231e-6■■■■■ 30.9
MSI2-204ENST00000442934 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.42■□□□□ 0.064e-32■■■■■ 29.9
MSI2-204ENST00000442934 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.611e-6■■■■■ 27.9
MSI2-204ENST00000442934 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.7□□□□□ -0.063e-8■■■■■ 27
MSI2-204ENST00000442934 NONOQ15233 471 aaKnown RBP eCLIP18.34■□□□□ 0.534e-7■■■■□ 25.7
MSI2-204ENST00000442934 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.99■□□□□ 0.313e-6■■■■□ 24.6
MSI2-204ENST00000442934 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.8■□□□□ 0.286e-7■■■■□ 23.9
MSI2-204ENST00000442934 CDC40O60508 579 aaKnown RBP eCLIP14.7□□□□□ -0.068e-7■■■■□ 23.9
MSI2-204ENST00000442934 TIA1P31483 386 aaKnown RBP eCLIP15.46■□□□□ 0.072e-13■■■■□ 23.7
MSI2-204ENST00000442934 SF3B4Q15427 424 aaKnown RBP eCLIP14.06□□□□□ -0.162e-7■■■■□ 23.1
MSI2-204ENST00000442934 TARDBPQ13148 414 aaKnown RBP eCLIP14.88□□□□□ -0.031e-6■■■■□ 21.9
MSI2-204ENST00000442934 YBX3P16989 372 aaKnown RBP eCLIP18.16■□□□□ 0.51e-6■■■■□ 21.3
MSI2-204ENST00000442934 SF3A3Q12874 501 aaKnown RBP eCLIP16.04■□□□□ 0.164e-7■■■■□ 21.1
MSI2-204ENST00000442934 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.29■□□□□ 0.683e-7■■■■□ 20.6
MSI2-204ENST00000442934 HNRNPKP61978 463 aaKnown RBP eCLIP15.3■□□□□ 0.042e-6■■■■□ 20.6
MSI2-204ENST00000442934 EIF3DO15371 548 aaKnown RBP eCLIP17.79■□□□□ 0.449e-11■■■■□ 20.5
MSI2-204ENST00000442934 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■■■□ 20.1
MSI2-204ENST00000442934 SAFB2Q14151 953 aaKnown RBP eCLIP21.71■■□□□ 1.072e-6■■■■□ 20
MSI2-204ENST00000442934 HNRNPMP52272 730 aaKnown RBP eCLIP23.41■■□□□ 1.348e-7■■■■□ 19.8
MSI2-204ENST00000442934 QKIQ96PU8 341 aaKnown RBP eCLIP16.65■□□□□ 0.263e-7■■■■□ 19.7
MSI2-204ENST00000442934 TAF15Q92804 592 aaKnown RBP eCLIP12.99□□□□□ -0.332e-6■■■■□ 19.6
MSI2-204ENST00000442934 FUBP3Q96I24 572 aaKnown RBP eCLIP16.77■□□□□ 0.279e-9■■■□□ 19
MSI2-204ENST00000442934 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.2■□□□□ 0.183e-7■■■□□ 18.1
MSI2-204ENST00000442934 FUSP35637 526 aaKnown RBP eCLIP10.01□□□□□ -0.814e-6■■■□□ 17.9
MSI2-204ENST00000442934 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.09■□□□□ 0.331e-6■■■□□ 17.6
MSI2-204ENST00000442934 KHSRPQ92945 711 aaKnown RBP eCLIP16.85■□□□□ 0.291e-9■■■□□ 16.6
MSI2-204ENST00000442934 PCBP2Q15366 365 aaKnown RBP eCLIP15.83■□□□□ 0.121e-6■■■□□ 16.6
MSI2-204ENST00000442934 HNRNPUQ00839 825 aaKnown RBP eCLIP21.76■■□□□ 1.071e-6■■■□□ 16.5
MSI2-204ENST00000442934 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.5■□□□□ 0.875e-9■■■□□ 16.4
MSI2-204ENST00000442934 RBFOX2O43251 390 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■■□□ 16.3
MSI2-204ENST00000442934 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.31■■□□□ 11e-6■■■□□ 16.2
MSI2-204ENST00000442934 MATR3P43243 847 aaKnown RBP eCLIP17.41■□□□□ 0.382e-6■■■□□ 16
MSI2-204ENST00000442934 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.39■□□□□ 0.375e-7■■■□□ 15.5
MSI2-204ENST00000442934 EFTUD2Q15029 972 aaKnown RBP eCLIP16.38■□□□□ 0.214e-8■■■□□ 15.4
MSI2-204ENST00000442934 HNRNPCP07910 306 aaKnown RBP eCLIP13.92□□□□□ -0.184e-7■■■□□ 15.3
MSI2-204ENST00000442934 SFPQP23246 707 aaKnown RBP eCLIP17.87■□□□□ 0.451e-6■■■□□ 15.2
MSI2-204ENST00000442934 SRSF7Q16629 238 aaKnown RBP eCLIP13.69□□□□□ -0.224e-7■■■□□ 14.9
MSI2-204ENST00000442934 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.26■■□□□ 1.475e-6■■■□□ 14.8
MSI2-204ENST00000442934 TIAL1Q01085 375 aaKnown RBP eCLIP16■□□□□ 0.154e-6■■■□□ 14.7
MSI2-204ENST00000442934 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.72□□□□□ -0.376e-7■■□□□ 14.5
MSI2-204ENST00000442934 SUB1P53999 127 aaKnown RBP eCLIP12.91□□□□□ -0.344e-9■■□□□ 13.6
MSI2-204ENST00000442934 PPIGQ13427 754 aaKnown RBP eCLIP16.56■□□□□ 0.244e-7■■□□□ 13.5
MSI2-204ENST00000442934 ILF3Q12906 894 aaKnown RBP eCLIP15.45■□□□□ 0.064e-6■■□□□ 12.9
MSI2-204ENST00000442934 RBM22Q9NW64 420 aaKnown RBP eCLIP16.4■□□□□ 0.221e-8■■□□□ 12.4
MSI2-204ENST00000442934 SRSF9Q13242 221 aaKnown RBP eCLIP11.05□□□□□ -0.644e-6■■□□□ 12.1
MSI2-204ENST00000442934 PRPF4O43172 522 aaKnown RBP eCLIP16.38■□□□□ 0.212e-6■■□□□ 12
MSI2-204ENST00000442934 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.01■□□□□ 0.311e-6■■□□□ 11.6
MSI2-204ENST00000442934 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.54□□□□□ -0.082e-6■■□□□ 11.5
MSI2-204ENST00000442934 HLTFQ14527 1009 aaKnown RBP eCLIP16.85■□□□□ 0.299e-8■□□□□ 11.3
MSI2-204ENST00000442934 U2AF2P26368 475 aaKnown RBP eCLIP18.62■□□□□ 0.573e-7■□□□□ 11.2
MSI2-204ENST00000442934 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.67■□□□□ 0.263e-7■□□□□ 10.9
MSI2-204ENST00000442934 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.67■□□□□ 0.261e-7■□□□□ 10.8
MSI2-204ENST00000442934 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.28□□□□□ -0.123e-8■□□□□ 10.6
MSI2-204ENST00000442934 BCCIPQ9P287 314 aaKnown RBP eCLIP16.54■□□□□ 0.243e-6■□□□□ 10.4
MSI2-204ENST00000442934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.92■■□□□ 1.266e-8■□□□□ 10.2
MSI2-204ENST00000442934 TRA2AQ13595 282 aaKnown RBP eCLIP14.93□□□□□ -0.022e-8■□□□□ 9.9
MSI2-204ENST00000442934 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.24■□□□□ 0.037e-6■□□□□ 9.5
MSI2-204ENST00000442934 SRSF1Q07955 248 aaKnown RBP eCLIP13□□□□□ -0.331e-8■□□□□ 9
MSI2-204ENST00000442934 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.82■□□□□ 0.121e-5■□□□□ 8.8
MSI2-204ENST00000442934 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.051e-5■□□□□ 8.6
MSI2-204ENST00000442934 ZRANB2O95218 330 aaKnown RBP eCLIP17.01■□□□□ 0.312e-6■□□□□ 8.1
Retrieved 73 of 73 RNA–protein pairs in 15.3 ms