RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C TY1A-LR1P0CX68 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-MR2P0CX69 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-JR2P47099 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-DR1Q03856 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-ML1Q04706 440 aaKnown RBP7.73□□□□□ -1.17
SSO2YMR183C TY1A-BRQ12217 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-NL2Q12470 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-GR2Q12485 440 aa7.73□□□□□ -1.17
SSO2YMR183C SEC2P17065 759 aa7.72□□□□□ -1.17
SSO2YMR183C BDP1P46678 594 aa7.72□□□□□ -1.17
SSO2YMR183C GAP1P19145 602 aaPredicted RBP7.71□□□□□ -1.18
SSO2YMR183C TUM1Q08686 304 aaKnown RBP7.71□□□□□ -1.18
SSO2YMR183C GCD11P32481 527 aaKnown RBP7.7□□□□□ -1.18
SSO2YMR183C VPS70P47161 811 aa7.7□□□□□ -1.18
SSO2YMR183C TFB4Q12004 338 aa7.7□□□□□ -1.18
SSO2YMR183C NPL4P33755 580 aa7.69□□□□□ -1.18
SSO2YMR183C LCB5Q06147 687 aaKnown RBP7.69□□□□□ -1.18
SSO2YMR183C HED1Q03937 162 aa7.68□□□□□ -1.18
SSO2YMR183C SAS10Q12136 610 aaPredicted RBP7.68□□□□□ -1.18
SSO2YMR183C YDR090CQ03193 310 aa7.66□□□□□ -1.18
SSO2YMR183C CSC1Q06538 782 aa7.66□□□□□ -1.18
SSO2YMR183C REF2P42073 533 aaPredicted RBP7.65□□□□□ -1.18
SSO2YMR183C RRN7P40992 514 aa7.63□□□□□ -1.19
SSO2YMR183C CKB1P43639 278 aa7.62□□□□□ -1.19
SSO2YMR183C KIC1P38692 1080 aa7.61□□□□□ -1.19
SSO2YMR183C MTC5Q03897 1148 aa7.61□□□□□ -1.19
SSO2YMR183C ASH1P34233 588 aa7.6□□□□□ -1.19
SSO2YMR183C MET32Q12041 191 aa7.59□□□□□ -1.19
SSO2YMR183C MAK21Q12176 1025 aaKnown RBP7.57□□□□□ -1.2
SSO2YMR183C AFT1P22149 690 aa7.55□□□□□ -1.2
SSO2YMR183C PAT1P25644 796 aaKnown RBP7.55□□□□□ -1.2
SSO2YMR183C RRD1P40454 393 aaKnown RBP7.55□□□□□ -1.2
SSO2YMR183C COX6P00427 148 aa7.53□□□□□ -1.2
SSO2YMR183C HST3P53687 447 aa7.52□□□□□ -1.21
SSO2YMR183C PBS2P08018 668 aa7.51□□□□□ -1.21
SSO2YMR183C ORC6P38826 435 aa7.51□□□□□ -1.21
SSO2YMR183C YJR115WP47152 169 aa7.46□□□□□ -1.22
SSO2YMR183C DSF2P38213 736 aa7.45□□□□□ -1.22
SSO2YMR183C CAF120P53836 1060 aa7.45□□□□□ -1.22
SSO2YMR183C SPB4P25808 606 aaPredicted RBP7.44□□□□□ -1.22
SSO2YMR183C MVP1P40959 511 aaKnown RBP7.44□□□□□ -1.22
SSO2YMR183C MOD5P07884 428 aa7.43□□□□□ -1.22
SSO2YMR183C MAM3Q12296 706 aa7.43□□□□□ -1.22
SSO2YMR183C PUS5Q06244 254 aa7.42□□□□□ -1.22
SSO2YMR183C ERF2Q06551 359 aa7.42□□□□□ -1.22
SSO2YMR183C PAC1P39946 494 aaKnown RBP7.41□□□□□ -1.22
SSO2YMR183C YPR109WQ06104 294 aa7.41□□□□□ -1.22
SSO2YMR183C KEX2P13134 814 aa7.4□□□□□ -1.22
SSO2YMR183C ACO2P39533 789 aa7.4□□□□□ -1.22
SSO2YMR183C TRK2P28584 889 aa7.39□□□□□ -1.23
SSO2YMR183C IES2P40154 320 aa7.36□□□□□ -1.23
SSO2YMR183C RGR1P19263 1082 aa7.35□□□□□ -1.23
SSO2YMR183C PSE1P32337 1089 aaKnown RBP7.34□□□□□ -1.23
SSO2YMR183C NUP42P49686 430 aaKnown RBP7.33□□□□□ -1.24
SSO2YMR183C YGR035CP53222 116 aa7.33□□□□□ -1.24
SSO2YMR183C MSB3P48566 633 aaPredicted RBP7.31□□□□□ -1.24
SSO2YMR183C AGE1Q04412 482 aa7.3□□□□□ -1.24
SSO2YMR183C OPT2Q06593 877 aa7.3□□□□□ -1.24
SSO2YMR183C DIT2P21595 489 aa7.28□□□□□ -1.24
SSO2YMR183C TUB4P53378 473 aa7.27□□□□□ -1.25
SSO2YMR183C HPF1Q05164 967 aa7.26□□□□□ -1.25
SSO2YMR183C CLB5P30283 435 aa7.25□□□□□ -1.25
SSO2YMR183C YIR007WP40566 764 aa7.24□□□□□ -1.25
SSO2YMR183C YLR346CQ06139 101 aa7.23□□□□□ -1.25
SSO2YMR183C PTK2P47116 818 aaKnown RBP7.22□□□□□ -1.25
SSO2YMR183C YNR021WP53723 404 aaKnown RBP7.22□□□□□ -1.25
SSO2YMR183C LEU3P08638 886 aa7.2□□□□□ -1.26
SSO2YMR183C UGA3P26370 528 aa7.2□□□□□ -1.26
SSO2YMR183C GLY1P37303 387 aaKnown RBP7.19□□□□□ -1.26
SSO2YMR183C TEA1P47988 759 aa7.19□□□□□ -1.26
SSO2YMR183C SRF1Q12516 437 aa7.19□□□□□ -1.26
SSO2YMR183C SYH1Q02875 849 aaKnown RBP7.17□□□□□ -1.26
SSO2YMR183C ICP55P40051 511 aa7.16□□□□□ -1.26
SSO2YMR183C LSB3P43603 459 aaKnown RBP7.16□□□□□ -1.26
SSO2YMR183C SCW11P53189 542 aa7.15□□□□□ -1.26
SSO2YMR183C ATF2P53296 535 aa7.15□□□□□ -1.26
SSO2YMR183C TPD3P31383 635 aa7.14□□□□□ -1.27
SSO2YMR183C GLC3P32775 704 aa7.14□□□□□ -1.27
SSO2YMR183C TY1A-BLQ12266 440 aa7.14□□□□□ -1.27
SSO2YMR183C KXD1P53158 218 aa7.13□□□□□ -1.27
SSO2YMR183C TYW1Q08960 810 aaKnown RBP7.13□□□□□ -1.27
SSO2YMR183C SIT4P20604 311 aa7.12□□□□□ -1.27
SSO2YMR183C NUP85P46673 744 aa7.12□□□□□ -1.27
SSO2YMR183C YPR204WQ08995 1032 aa7.12□□□□□ -1.27
SSO2YMR183C AIM7Q12156 149 aa7.12□□□□□ -1.27
SSO2YMR183C PUS1Q12211 544 aaKnown RBP7.12□□□□□ -1.27
SSO2YMR183C RTF1P53064 558 aa7.11□□□□□ -1.27
SSO2YMR183C NIS1P53939 407 aa7.11□□□□□ -1.27
SSO2YMR183C MIP1P15801 1254 aa7.1□□□□□ -1.27
SSO2YMR183C HXT10P43581 546 aa7.1□□□□□ -1.27
SSO2YMR183C YNL115CP53925 644 aa7.08□□□□□ -1.28
SSO2YMR183C TAF7Q05021 590 aa7.08□□□□□ -1.28
SSO2YMR183C FPK1P53739 893 aa7.07□□□□□ -1.28
SSO2YMR183C RPN1P38764 993 aaKnown RBP7.06□□□□□ -1.28
SSO2YMR183C YMR196WQ04336 1088 aa7.06□□□□□ -1.28
SSO2YMR183C PDC1P06169 563 aaKnown RBP7.05□□□□□ -1.28
SSO2YMR183C NRD1P53617 575 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
SSO2YMR183C HST2P53686 357 aa7.03□□□□□ -1.28
SSO2YMR183C MRT4P33201 236 aaKnown RBP7.01□□□□□ -1.29
SSO2YMR183C PHM7Q12252 991 aa7.01□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 49.1 ms