Protein–RNA interactions for Protein: P38764

RPN1, 26S proteasome regulatory subunit RPN1, yeastyeast

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN1P38764 YML009W-BYML009W-B 477 nt25.02■■□□□ 1.6
RPN1P38764 NOP1YDL014W 984 nt24.54■■□□□ 1.52
RPN1P38764 NSR1YGR159C 1245 nt24.46■■□□□ 1.51
RPN1P38764 YKL036CYKL036C 393 nt23.12■■□□□ 1.29
RPN1P38764 Q0297Q0297 156 nt21.68■■□□□ 1.06
RPN1P38764 YJL027CYJL027C 417 nt21.66■■□□□ 1.06
RPN1P38764 SRX1YKL086W 384 nt21.46■■□□□ 1.03
RPN1P38764 SCS3YGL126W 1143 nt21.29■■□□□ 1
RPN1P38764 MDJ1YFL016C 1536 nt21.24■□□□□ 0.99
RPN1P38764 YCR051WYCR051W 669 nt20.37■□□□□ 0.85
RPN1P38764 YOL085CYOL085C 342 nt20.02■□□□□ 0.8
RPN1P38764 PKP1YIL042C 1185 nt19.63■□□□□ 0.73
RPN1P38764 SCJ1YMR214W 1134 nt19.51■□□□□ 0.71
RPN1P38764 RPP1BYDL130W 321 nt19.44■□□□□ 0.7
RPN1P38764 ATS1YAL020C 1002 nt19.2■□□□□ 0.66
RPN1P38764 TRN1tP(UGG)A 72 nt19.12■□□□□ 0.65
RPN1P38764 SUF9tP(UGG)F 72 nt19.12■□□□□ 0.65
RPN1P38764 SUF8tP(UGG)H 72 nt19.12■□□□□ 0.65
RPN1P38764 tP(UGG)LtP(UGG)L 72 nt19.12■□□□□ 0.65
RPN1P38764 SUF7tP(UGG)M 72 nt19.12■□□□□ 0.65
RPN1P38764 tP(UGG)N1tP(UGG)N1 72 nt19.12■□□□□ 0.65
RPN1P38764 tP(UGG)N2tP(UGG)N2 72 nt19.12■□□□□ 0.65
RPN1P38764 tP(UGG)O1tP(UGG)O1 72 nt19.12■□□□□ 0.65
RPN1P38764 SUF11tP(UGG)O2 72 nt19.12■□□□□ 0.65
RPN1P38764 DBP2YNL112W 1641 nt19.02■□□□□ 0.64
RPN1P38764 Q0182Q0182 405 nt18.89■□□□□ 0.61
RPN1P38764 CCC1YLR220W 969 nt18.89■□□□□ 0.61
RPN1P38764 PET122YER153C 765 nt18.51■□□□□ 0.55
RPN1P38764 MOT3YMR070W 1473 nt18.46■□□□□ 0.55
RPN1P38764 SCR1SCR1 522 nt18.43■□□□□ 0.54
RPN1P38764 tP(UGG)O3tP(UGG)O3 72 nt18.25■□□□□ 0.51
RPN1P38764 RRN5YLR141W 1092 nt18.03■□□□□ 0.48
RPN1P38764 YBR190WYBR190W 312 nt17.99■□□□□ 0.47
RPN1P38764 RVS167YDR388W 1449 nt17.97■□□□□ 0.47
RPN1P38764 RSB1YOR049C 1065 nt17.79■□□□□ 0.44
RPN1P38764 RTC3YHR087W 336 nt17.72■□□□□ 0.43
RPN1P38764 PST2YDR032C 597 nt17.7■□□□□ 0.42
RPN1P38764 YER088W-BYER088W-B 147 nt17.69■□□□□ 0.42
RPN1P38764 YDJ1YNL064C 1230 nt17.66■□□□□ 0.42
RPN1P38764 SHR5YOL110W 714 nt17.48■□□□□ 0.39
RPN1P38764 YKL097CYKL097C 411 nt17.24■□□□□ 0.35
RPN1P38764 GAR1YHR089C 618 nt17.16■□□□□ 0.34
RPN1P38764 SSA3YBL075C 1950 nt17.11■□□□□ 0.33
RPN1P38764 SHU1YHL006C 453 nt16.85■□□□□ 0.29
RPN1P38764 DEP1YAL013W 1218 nt16.79■□□□□ 0.28
RPN1P38764 URN1YPR152C 1398 nt16.66■□□□□ 0.26
RPN1P38764 YNL208WYNL208W 600 nt16.6■□□□□ 0.25
RPN1P38764 TIR1YER011W 765 nt16.56■□□□□ 0.24
RPN1P38764 RPN10YHR200W 807 nt16.53■□□□□ 0.24
RPN1P38764 YOR139CYOR139C 393 nt16.48■□□□□ 0.23
RPN1P38764 YAL037C-BYAL037C-B 975 nt16.41■□□□□ 0.22
RPN1P38764 OPI9YLR338W 858 nt16.34■□□□□ 0.21
RPN1P38764 SSA1YAL005C 1929 nt16.27■□□□□ 0.2
RPN1P38764 NPL3YDR432W 1245 nt16.2■□□□□ 0.18
RPN1P38764 SRB2YHR041C 633 nt16.11■□□□□ 0.17
RPN1P38764 SAH1YER043C 1350 nt16.09■□□□□ 0.17
RPN1P38764 PUT4YOR348C 1884 nt16.06■□□□□ 0.16
RPN1P38764 YGR021WYGR021W 873 nt15.99■□□□□ 0.15
RPN1P38764 HOM6YJR139C 1080 nt15.97■□□□□ 0.15
RPN1P38764 MNP1YGL068W 585 nt15.95■□□□□ 0.14
RPN1P38764 WWM1YFL010C 636 nt15.93■□□□□ 0.14
RPN1P38764 YJR018WYJR018W 363 nt15.93■□□□□ 0.14
RPN1P38764 YOL037CYOL037C 354 nt15.89■□□□□ 0.13
RPN1P38764 PUN1YLR414C 792 nt15.86■□□□□ 0.13
RPN1P38764 YJR120WYJR120W 351 nt15.83■□□□□ 0.12
RPN1P38764 ARE1YCR048W 1833 nt15.82■□□□□ 0.12
RPN1P38764 tM(CAU)CtM(CAU)C 72 nt15.8■□□□□ 0.12
RPN1P38764 IMT4tM(CAU)E 72 nt15.8■□□□□ 0.12
RPN1P38764 IMT3tM(CAU)J3 72 nt15.8■□□□□ 0.12
RPN1P38764 IMT1tM(CAU)O1 72 nt15.8■□□□□ 0.12
RPN1P38764 IMT2tM(CAU)P 72 nt15.8■□□□□ 0.12
RPN1P38764 RPP2BYDR382W 333 nt15.74■□□□□ 0.11
RPN1P38764 RKM5YLR137W 1104 nt15.73■□□□□ 0.11
RPN1P38764 NME1NME1 340 nt15.71■□□□□ 0.11
RPN1P38764 YFL021C-AYFL021C-A 855 nt15.67■□□□□ 0.1
RPN1P38764 YHR049C-AYHR049C-A 297 nt15.6■□□□□ 0.09
RPN1P38764 PTC2YER089C 1395 nt15.57■□□□□ 0.08
RPN1P38764 BDH2YAL061W 1254 nt15.52■□□□□ 0.08
RPN1P38764 POA1YBR022W 534 nt15.52■□□□□ 0.08
RPN1P38764 YLR281CYLR281C 468 nt15.5■□□□□ 0.07
RPN1P38764 PUS2YGL063W 1113 nt15.48■□□□□ 0.07
RPN1P38764 LSM3YLR438C-A 270 nt15.43■□□□□ 0.06
RPN1P38764 WHI5YOR083W 888 nt15.36■□□□□ 0.05
RPN1P38764 BSC6YOL137W 1494 nt15.34■□□□□ 0.05
RPN1P38764 INM2YDR287W 879 nt15.31■□□□□ 0.04
RPN1P38764 NAB2YGL122C 1578 nt15.3■□□□□ 0.04
RPN1P38764 BUD23YCR047C 828 nt15.26■□□□□ 0.03
RPN1P38764 YBL100CYBL100C 315 nt15.24■□□□□ 0.03
RPN1P38764 DAL1YIR027C 1383 nt15.21■□□□□ 0.02
RPN1P38764 SPT5YML010W 3192 nt15.2■□□□□ 0.02
RPN1P38764 FIS1YIL065C 468 nt15.15■□□□□ 0.02
RPN1P38764 FPR4YLR449W 1179 nt15.15■□□□□ 0.02
RPN1P38764 SSA4YER103W 1929 nt15.13■□□□□ 0.01
RPN1P38764 TRM9YML014W 840 nt15.13■□□□□ 0.01
RPN1P38764 YPR011CYPR011C 981 nt15.12■□□□□ 0.01
RPN1P38764 FMP45YDL222C 930 nt15.1■□□□□ 0.01
RPN1P38764 DSK2YMR276W 1122 nt15.09■□□□□ 0.01
RPN1P38764 FUN26YAL022C 1554 nt15.08■□□□□ 0
RPN1P38764 PHO4YFR034C 939 nt15.06■□□□□ 0
RPN1P38764 YLR236CYLR236C 324 nt15.04■□□□□ -0
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms