RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C FAP1P53971 965 aa16.07■□□□□ 0.16
SSO2YMR183C MTC1P47018 478 aaKnown RBP15.98■□□□□ 0.15
SSO2YMR183C PRY3P47033 881 aa15.17■□□□□ 0.02
SSO2YMR183C AAD16Q02895 342 aa14.4□□□□□ -0.1
SSO2YMR183C PRI1P10363 409 aa14.31□□□□□ -0.12
SSO2YMR183C YCK3P39962 524 aa14.31□□□□□ -0.12
SSO2YMR183C HAA1Q12753 694 aaKnown RBP14.12□□□□□ -0.15
SSO2YMR183C ISW2Q08773 1120 aa13.55□□□□□ -0.24
SSO2YMR183C RPG1P38249 964 aaKnown RBP13.47□□□□□ -0.25
SSO2YMR183C TSR3Q12094 313 aaKnown RBP13.46□□□□□ -0.25
SSO2YMR183C DRS1P32892 752 aaKnown RBP13.42□□□□□ -0.26
SSO2YMR183C MRPL32P25348 183 aa12.91□□□□□ -0.34
SSO2YMR183C YGL015CP33199 130 aa12.8□□□□□ -0.36
SSO2YMR183C BUD31P25337 157 aaPredicted RBP12.41□□□□□ -0.42
SSO2YMR183C RSE1Q04693 1361 aaKnown RBP12.3□□□□□ -0.44
SSO2YMR183C DIP2Q12220 943 aaPredicted RBP12.3□□□□□ -0.44
SSO2YMR183C REB1P21538 810 aa12.11□□□□□ -0.47
SSO2YMR183C RPL17AP05740 184 aaKnown RBP12.03□□□□□ -0.48
SSO2YMR183C CDC27P38042 758 aa12.03□□□□□ -0.48
SSO2YMR183C RPL17BP46990 184 aaKnown RBP12.03□□□□□ -0.48
SSO2YMR183C UBP10P53874 792 aaPredicted RBP11.86□□□□□ -0.51
SSO2YMR183C MAP2P38174 421 aaKnown RBP11.82□□□□□ -0.52
SSO2YMR183C SIS1P25294 352 aaKnown RBP11.66□□□□□ -0.54
SSO2YMR183C YKR023WP36119 530 aaKnown RBP11.63□□□□□ -0.55
SSO2YMR183C UBP9P39967 754 aa11.45□□□□□ -0.58
SSO2YMR183C AVT3P36062 692 aa11.44□□□□□ -0.58
SSO2YMR183C SPT21P35209 758 aa11.41□□□□□ -0.58
SSO2YMR183C DCD1P06773 312 aa11.4□□□□□ -0.58
SSO2YMR183C HOP09932 586 aa11.39□□□□□ -0.59
SSO2YMR183C TFC8Q12308 588 aa11.38□□□□□ -0.59
SSO2YMR183C TIF4632P39936 914 aaKnown RBP11.36□□□□□ -0.59
SSO2YMR183C TGL3P40308 642 aa11.35□□□□□ -0.59
SSO2YMR183C SCY1P53009 804 aa11.31□□□□□ -0.6
SSO2YMR183C SLX5P32828 619 aaKnown RBP11.25□□□□□ -0.61
SSO2YMR183C BCH2P36122 765 aa10.95□□□□□ -0.66
SSO2YMR183C BFR2Q06631 534 aaKnown RBP10.84□□□□□ -0.67
SSO2YMR183C YBL029C-AQ3E756 94 aa10.78□□□□□ -0.68
SSO2YMR183C MST1P07236 462 aa10.71□□□□□ -0.69
SSO2YMR183C RIM101P33400 625 aa10.67□□□□□ -0.7
SSO2YMR183C VNX1P42839 908 aa10.6□□□□□ -0.71
SSO2YMR183C YOR238WQ08634 303 aa10.58□□□□□ -0.72
SSO2YMR183C BDF1P35817 686 aa10.57□□□□□ -0.72
SSO2YMR183C EPS1P40557 701 aa10.57□□□□□ -0.72
SSO2YMR183C SPP1Q03012 353 aa10.48□□□□□ -0.73
SSO2YMR183C AIR2Q12476 344 aaKnown RBP10.45□□□□□ -0.74
SSO2YMR183C NSR1P27476 414 aaKnown RBP RIP-Chip data10.4□□□□□ -0.74not detected
SSO2YMR183C YJL171CP46992 396 aa10.4□□□□□ -0.74
SSO2YMR183C WSC3Q12215 556 aa10.38□□□□□ -0.75
SSO2YMR183C FKH1P40466 484 aa10.37□□□□□ -0.75
SSO2YMR183C YAP5P40574 245 aa10.3□□□□□ -0.76
SSO2YMR183C TIF11P38912 153 aaKnown RBP10.29□□□□□ -0.76
SSO2YMR183C OXP1P28273 1286 aa10.28□□□□□ -0.76
SSO2YMR183C PTP3P40048 928 aa10.16□□□□□ -0.78
SSO2YMR183C LDB19Q12502 818 aa10.15□□□□□ -0.78
SSO2YMR183C BMT6Q12291 365 aa10.14□□□□□ -0.79
SSO2YMR183C GTT3P39996 337 aa10.13□□□□□ -0.79
SSO2YMR183C YIL055CP40523 627 aaKnown RBP10.09□□□□□ -0.79
SSO2YMR183C BBC1P47068 1157 aa10.09□□□□□ -0.79
SSO2YMR183C IOC2Q12072 812 aa10.07□□□□□ -0.8
SSO2YMR183C ULI1P43604 169 aa10.06□□□□□ -0.8
SSO2YMR183C AI2P03876 854 aa10□□□□□ -0.81
SSO2YMR183C RSM7P47150 247 aa9.97□□□□□ -0.81
SSO2YMR183C PIB1Q06651 286 aa9.89□□□□□ -0.83
SSO2YMR183C TFA1P36100 482 aa9.86□□□□□ -0.83
SSO2YMR183C RTG1P32607 177 aa9.82□□□□□ -0.84
SSO2YMR183C MSB4Q12317 492 aa9.82□□□□□ -0.84
SSO2YMR183C EAP1P36041 632 aaKnown RBP9.8□□□□□ -0.84
SSO2YMR183C NCR1Q12200 1170 aa9.79□□□□□ -0.84
SSO2YMR183C YAH1Q12184 172 aaKnown RBP9.76□□□□□ -0.85
SSO2YMR183C TRP5P00931 707 aaKnown RBP9.73□□□□□ -0.85
SSO2YMR183C SET4P42948 560 aa9.7□□□□□ -0.86
SSO2YMR183C YOL036WQ08206 761 aa9.7□□□□□ -0.86
SSO2YMR183C SEC61P32915 480 aa9.68□□□□□ -0.86
SSO2YMR183C YNL035CP53962 389 aaKnown RBP9.67□□□□□ -0.86
SSO2YMR183C BCK2P33306 851 aa9.62□□□□□ -0.87
SSO2YMR183C MRM1P25270 412 aa9.57□□□□□ -0.88
SSO2YMR183C PSD2P53037 1138 aaKnown RBP9.56□□□□□ -0.88
SSO2YMR183C TFG1P41895 735 aaPredicted RBP9.53□□□□□ -0.88
SSO2YMR183C YLR271WQ06152 274 aa9.53□□□□□ -0.88
SSO2YMR183C SAP30P38429 201 aa9.52□□□□□ -0.89
SSO2YMR183C CHL1P22516 861 aaPredicted RBP9.48□□□□□ -0.89
SSO2YMR183C DBP1P24784 617 aaKnown RBP9.45□□□□□ -0.9
SSO2YMR183C VMA1P17255 1071 aaKnown RBP9.44□□□□□ -0.9
SSO2YMR183C YMR1P47147 688 aaKnown RBP RIP-Chip data9.44□□□□□ -0.9not detected
SSO2YMR183C DAN4P47179 1161 aa9.44□□□□□ -0.9
SSO2YMR183C SAM3Q08986 587 aa9.43□□□□□ -0.9
SSO2YMR183C PRE3P38624 215 aa9.41□□□□□ -0.9
SSO2YMR183C YFR006WP43590 535 aa9.41□□□□□ -0.9
SSO2YMR183C YDL129WQ07555 291 aa9.41□□□□□ -0.9
SSO2YMR183C VPS29P38759 282 aa9.39□□□□□ -0.91
SSO2YMR183C JIP4Q03361 876 aa9.38□□□□□ -0.91
SSO2YMR183C STS1P38637 319 aa9.33□□□□□ -0.92
SSO2YMR183C RGA2Q06407 1009 aa9.32□□□□□ -0.92
SSO2YMR183C XDJ1P39102 459 aa9.31□□□□□ -0.92
SSO2YMR183C VRP1P37370 817 aa9.27□□□□□ -0.93
SSO2YMR183C ABP1P15891 592 aaKnown RBP9.25□□□□□ -0.93
SSO2YMR183C RTG3P38165 486 aa9.24□□□□□ -0.93
SSO2YMR183C HTA1P04911 132 aaKnown RBP9.22□□□□□ -0.93
SSO2YMR183C HTA2P04912 132 aa9.22□□□□□ -0.93
SSO2YMR183C GYP5Q12344 894 aa9.22□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms