RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W TY1A-GR3P0CX67 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-LR1P0CX68 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-MR2P0CX69 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-JR2P47099 440 aa8.3□□□□□ -1.08
PTI1YGR156W VPS70P47161 811 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-DR1Q03856 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-ML1Q04706 440 aaKnown RBP8.3□□□□□ -1.08
PTI1YGR156W TY1A-BRQ12217 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-NL2Q12470 440 aa8.3□□□□□ -1.08
PTI1YGR156W TY1A-GR2Q12485 440 aa8.3□□□□□ -1.08
PTI1YGR156W FRK1Q03002 865 aaPredicted RBP8.29□□□□□ -1.08
PTI1YGR156W SEC2P17065 759 aa8.28□□□□□ -1.08
PTI1YGR156W LAM6Q08001 693 aa8.27□□□□□ -1.09
PTI1YGR156W MVP1P40959 511 aaKnown RBP8.26□□□□□ -1.09
PTI1YGR156W RRN7P40992 514 aa8.25□□□□□ -1.09
PTI1YGR156W MAK21Q12176 1025 aaKnown RBP8.25□□□□□ -1.09
PTI1YGR156W COX6P00427 148 aa8.23□□□□□ -1.09
PTI1YGR156W YPR109WQ06104 294 aa8.23□□□□□ -1.09
PTI1YGR156W BDP1P46678 594 aa8.2□□□□□ -1.1
PTI1YGR156W RGR1P19263 1082 aa8.19□□□□□ -1.1
PTI1YGR156W MET22P32179 357 aa8.19□□□□□ -1.1
PTI1YGR156W PAT1P25644 796 aaKnown RBP8.18□□□□□ -1.1
PTI1YGR156W CDC4P07834 779 aa8.17□□□□□ -1.1
PTI1YGR156W KEX2P13134 814 aa8.16□□□□□ -1.1
PTI1YGR156W ENV9Q08651 330 aa8.16□□□□□ -1.1
PTI1YGR156W ERF2Q06551 359 aa8.14□□□□□ -1.11
PTI1YGR156W CKB1P43639 278 aa8.13□□□□□ -1.11
PTI1YGR156W HED1Q03937 162 aa8.08□□□□□ -1.12
PTI1YGR156W PBS2P08018 668 aa8.07□□□□□ -1.12
PTI1YGR156W PAC1P39946 494 aaKnown RBP8.06□□□□□ -1.12
PTI1YGR156W YDR444WQ04093 687 aa8.06□□□□□ -1.12
PTI1YGR156W YDL176WQ12027 708 aa8.03□□□□□ -1.12
PTI1YGR156W PUS5Q06244 254 aa8.02□□□□□ -1.13
PTI1YGR156W ASH1P34233 588 aa8□□□□□ -1.13
PTI1YGR156W TUB4P53378 473 aa8□□□□□ -1.13
PTI1YGR156W MET32Q12041 191 aa8□□□□□ -1.13
PTI1YGR156W PSE1P32337 1089 aaKnown RBP7.99□□□□□ -1.13
PTI1YGR156W LCB5Q06147 687 aaKnown RBP7.98□□□□□ -1.13
PTI1YGR156W MAM3Q12296 706 aa7.98□□□□□ -1.13
PTI1YGR156W MOD5P07884 428 aa7.97□□□□□ -1.13
PTI1YGR156W HST3P53687 447 aa7.97□□□□□ -1.13
PTI1YGR156W AGE1Q04412 482 aa7.97□□□□□ -1.13
PTI1YGR156W DMA1P38823 416 aa7.96□□□□□ -1.14
PTI1YGR156W CLB5P30283 435 aa7.95□□□□□ -1.14
PTI1YGR156W MTC5Q03897 1148 aa7.95□□□□□ -1.14
PTI1YGR156W AFT1P22149 690 aa7.93□□□□□ -1.14
PTI1YGR156W YNL115CP53925 644 aa7.91□□□□□ -1.14
PTI1YGR156W SAS10Q12136 610 aaPredicted RBP7.91□□□□□ -1.14
PTI1YGR156W SPB4P25808 606 aaPredicted RBP7.9□□□□□ -1.14
PTI1YGR156W DSF2P38213 736 aa7.9□□□□□ -1.14
PTI1YGR156W IES2P40154 320 aa7.9□□□□□ -1.14
PTI1YGR156W RTF1P53064 558 aa7.89□□□□□ -1.15
PTI1YGR156W RRD1P40454 393 aaKnown RBP7.87□□□□□ -1.15
PTI1YGR156W YJR115WP47152 169 aa7.87□□□□□ -1.15
PTI1YGR156W TEA1P47988 759 aa7.86□□□□□ -1.15
PTI1YGR156W KXD1P53158 218 aa7.86□□□□□ -1.15
PTI1YGR156W NIS1P53939 407 aa7.84□□□□□ -1.15
PTI1YGR156W SIT4P20604 311 aa7.82□□□□□ -1.16
PTI1YGR156W HXT10P43581 546 aa7.8□□□□□ -1.16
PTI1YGR156W NUP42P49686 430 aaKnown RBP7.8□□□□□ -1.16
PTI1YGR156W SYH1Q02875 849 aaKnown RBP7.8□□□□□ -1.16
PTI1YGR156W SLY41P22215 453 aa7.79□□□□□ -1.16
PTI1YGR156W PDC1P06169 563 aaKnown RBP7.78□□□□□ -1.16
PTI1YGR156W YMR196WQ04336 1088 aa7.77□□□□□ -1.17
PTI1YGR156W DIT2P21595 489 aa7.76□□□□□ -1.17
PTI1YGR156W UGA3P26370 528 aa7.76□□□□□ -1.17
PTI1YGR156W MSB3P48566 633 aaPredicted RBP7.76□□□□□ -1.17
PTI1YGR156W TPD3P31383 635 aa7.75□□□□□ -1.17
PTI1YGR156W KIP2P28743 706 aa7.74□□□□□ -1.17
PTI1YGR156W CAF120P53836 1060 aa7.74□□□□□ -1.17
PTI1YGR156W FPK1P53739 893 aa7.73□□□□□ -1.17
PTI1YGR156W TBF1Q02457 562 aa7.73□□□□□ -1.17
PTI1YGR156W SRF1Q12516 437 aa7.73□□□□□ -1.17
PTI1YGR156W YDL206WQ12424 762 aa7.72□□□□□ -1.17
PTI1YGR156W ACO2P39533 789 aa7.7□□□□□ -1.18
PTI1YGR156W PTK2P47116 818 aaKnown RBP7.7□□□□□ -1.18
PTI1YGR156W ALR1Q08269 859 aa7.7□□□□□ -1.18
PTI1YGR156W IXR1P33417 597 aa7.68□□□□□ -1.18
PTI1YGR156W OPT2Q06593 877 aa7.68□□□□□ -1.18
PTI1YGR156W SCJ1P25303 377 aa7.67□□□□□ -1.18
PTI1YGR156W TRK2P28584 889 aa7.67□□□□□ -1.18
PTI1YGR156W RPA14P50106 137 aa7.67□□□□□ -1.18
PTI1YGR156W PUS6P53294 404 aa7.67□□□□□ -1.18
PTI1YGR156W ATF2P53296 535 aa7.66□□□□□ -1.18
PTI1YGR156W YLR346CQ06139 101 aa7.65□□□□□ -1.18
PTI1YGR156W TRM1P15565 570 aaKnown RBP7.64□□□□□ -1.19
PTI1YGR156W YPR097WQ06839 1073 aa7.64□□□□□ -1.19
PTI1YGR156W TYW1Q08960 810 aaKnown RBP7.64□□□□□ -1.19
PTI1YGR156W YGR035CP53222 116 aa7.59□□□□□ -1.19
PTI1YGR156W HST2P53686 357 aa7.59□□□□□ -1.19
PTI1YGR156W MMP1Q12372 583 aa7.59□□□□□ -1.19
PTI1YGR156W MRT4P33201 236 aaKnown RBP7.58□□□□□ -1.2
PTI1YGR156W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.58□□□□□ -1.2not detected
PTI1YGR156W NUP85P46673 744 aa7.58□□□□□ -1.2
PTI1YGR156W GLN1P32288 370 aaKnown RBP7.57□□□□□ -1.2
PTI1YGR156W YIR007WP40566 764 aa7.57□□□□□ -1.2
PTI1YGR156W SCW11P53189 542 aa7.57□□□□□ -1.2
PTI1YGR156W ESS1P22696 170 aa7.56□□□□□ -1.2
PTI1YGR156W YNR021WP53723 404 aaKnown RBP7.56□□□□□ -1.2
PTI1YGR156W MIP1P15801 1254 aa7.55□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms