RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W TY1A-JR2P47099 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-DR1Q03856 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-ML1Q04706 440 aaKnown RBP9.54□□□□□ -0.88
HMRA1YCR097W TY1A-BRQ12217 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-NL2Q12470 440 aa9.54□□□□□ -0.88
HMRA1YCR097W TY1A-GR2Q12485 440 aa9.54□□□□□ -0.88
HMRA1YCR097W SPT16P32558 1035 aaKnown RBP9.53□□□□□ -0.88
HMRA1YCR097W AIR1P40507 360 aaKnown RBP9.5□□□□□ -0.89
HMRA1YCR097W YPR109WQ06104 294 aa9.5□□□□□ -0.89
HMRA1YCR097W RGR1P19263 1082 aa9.49□□□□□ -0.89
HMRA1YCR097W CLA4P48562 842 aa9.49□□□□□ -0.89
HMRA1YCR097W LAM6Q08001 693 aa9.49□□□□□ -0.89
HMRA1YCR097W BRE2P43132 505 aa9.47□□□□□ -0.89
HMRA1YCR097W GCR2Q01722 534 aa9.45□□□□□ -0.9
HMRA1YCR097W RRN7P40992 514 aa9.43□□□□□ -0.9
HMRA1YCR097W FRK1Q03002 865 aaPredicted RBP9.43□□□□□ -0.9
HMRA1YCR097W PAT1P25644 796 aaKnown RBP9.42□□□□□ -0.9
HMRA1YCR097W YPL062WQ02781 134 aa9.42□□□□□ -0.9
HMRA1YCR097W BDP1P46678 594 aa9.39□□□□□ -0.91
HMRA1YCR097W CDC4P07834 779 aa9.38□□□□□ -0.91
HMRA1YCR097W KEX2P13134 814 aa9.35□□□□□ -0.91
HMRA1YCR097W ERF2Q06551 359 aa9.35□□□□□ -0.91
HMRA1YCR097W GAR1P28007 205 aaKnown RBP9.34□□□□□ -0.91
HMRA1YCR097W HED1Q03937 162 aa9.33□□□□□ -0.92
HMRA1YCR097W CKB1P43639 278 aa9.31□□□□□ -0.92
HMRA1YCR097W PBS2P08018 668 aa9.3□□□□□ -0.92
HMRA1YCR097W GBP2P25555 427 aaKnown RBP RIP-Chip data9.3□□□□□ -0.92not detected
HMRA1YCR097W PSE1P32337 1089 aaKnown RBP9.3□□□□□ -0.92
HMRA1YCR097W MET22P32179 357 aa9.25□□□□□ -0.93
HMRA1YCR097W PAC1P39946 494 aaKnown RBP9.25□□□□□ -0.93
HMRA1YCR097W MOD5P07884 428 aa9.24□□□□□ -0.93
HMRA1YCR097W CLB5P30283 435 aa9.23□□□□□ -0.93
HMRA1YCR097W TUB4P53378 473 aa9.21□□□□□ -0.94
HMRA1YCR097W AGE1Q04412 482 aa9.21□□□□□ -0.94
HMRA1YCR097W ENV9Q08651 330 aa9.2□□□□□ -0.94
HMRA1YCR097W MAM3Q12296 706 aa9.19□□□□□ -0.94
HMRA1YCR097W ASH1P34233 588 aa9.18□□□□□ -0.94
HMRA1YCR097W RTF1P53064 558 aa9.18□□□□□ -0.94
HMRA1YCR097W MET32Q12041 191 aa9.18□□□□□ -0.94
HMRA1YCR097W YNL115CP53925 644 aa9.16□□□□□ -0.94
HMRA1YCR097W PUS5Q06244 254 aa9.16□□□□□ -0.94
HMRA1YCR097W AFT1P22149 690 aa9.15□□□□□ -0.94
HMRA1YCR097W YDR444WQ04093 687 aa9.14□□□□□ -0.95
HMRA1YCR097W HST3P53687 447 aa9.13□□□□□ -0.95
HMRA1YCR097W SIT4P20604 311 aa9.12□□□□□ -0.95
HMRA1YCR097W DSF2P38213 736 aa9.11□□□□□ -0.95
HMRA1YCR097W IES2P40154 320 aa9.1□□□□□ -0.95
HMRA1YCR097W TEA1P47988 759 aa9.09□□□□□ -0.95
HMRA1YCR097W LCB5Q06147 687 aaKnown RBP9.08□□□□□ -0.96
HMRA1YCR097W KXD1P53158 218 aa9.07□□□□□ -0.96
HMRA1YCR097W NUP42P49686 430 aaKnown RBP9.06□□□□□ -0.96
HMRA1YCR097W TPD3P31383 635 aa9.05□□□□□ -0.96
HMRA1YCR097W NIS1P53939 407 aa9.05□□□□□ -0.96
HMRA1YCR097W YJR115WP47152 169 aa9.03□□□□□ -0.96
HMRA1YCR097W SAS10Q12136 610 aaPredicted RBP9.03□□□□□ -0.96
HMRA1YCR097W RRD1P40454 393 aaKnown RBP9.02□□□□□ -0.97
HMRA1YCR097W HXT10P43581 546 aa9.02□□□□□ -0.97
HMRA1YCR097W YDL176WQ12027 708 aa9.01□□□□□ -0.97
HMRA1YCR097W SYH1Q02875 849 aaKnown RBP8.99□□□□□ -0.97
HMRA1YCR097W PDC1P06169 563 aaKnown RBP8.98□□□□□ -0.97
HMRA1YCR097W DIT2P21595 489 aa8.97□□□□□ -0.97
HMRA1YCR097W SLY41P22215 453 aa8.97□□□□□ -0.97
HMRA1YCR097W FPK1P53739 893 aa8.96□□□□□ -0.98
HMRA1YCR097W SPB4P25808 606 aaPredicted RBP8.95□□□□□ -0.98
HMRA1YCR097W MSB3P48566 633 aaPredicted RBP8.95□□□□□ -0.98
HMRA1YCR097W YMR196WQ04336 1088 aa8.92□□□□□ -0.98
HMRA1YCR097W RPA14P50106 137 aa8.9□□□□□ -0.98
HMRA1YCR097W PUS6P53294 404 aa8.9□□□□□ -0.98
HMRA1YCR097W UGA3P26370 528 aa8.89□□□□□ -0.99
HMRA1YCR097W DMA1P38823 416 aa8.89□□□□□ -0.99
HMRA1YCR097W ALR1Q08269 859 aa8.89□□□□□ -0.99
HMRA1YCR097W YPR097WQ06839 1073 aa8.88□□□□□ -0.99
HMRA1YCR097W KIP2P28743 706 aa8.87□□□□□ -0.99
HMRA1YCR097W YDL206WQ12424 762 aa8.87□□□□□ -0.99
HMRA1YCR097W TBF1Q02457 562 aa8.86□□□□□ -0.99
HMRA1YCR097W PTK2P47116 818 aaKnown RBP8.85□□□□□ -0.99
HMRA1YCR097W SCJ1P25303 377 aa8.84□□□□□ -0.99
HMRA1YCR097W IXR1P33417 597 aa8.84□□□□□ -0.99
HMRA1YCR097W ACO2P39533 789 aa8.84□□□□□ -0.99
HMRA1YCR097W SRF1Q12516 437 aa8.84□□□□□ -0.99
HMRA1YCR097W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.83□□□□□ -1not detected
HMRA1YCR097W HST2P53686 357 aa8.83□□□□□ -1
HMRA1YCR097W CAF120P53836 1060 aa8.83□□□□□ -1
HMRA1YCR097W YLR346CQ06139 101 aa8.83□□□□□ -1
HMRA1YCR097W OPT2Q06593 877 aa8.83□□□□□ -1
HMRA1YCR097W MRT4P33201 236 aaKnown RBP8.82□□□□□ -1
HMRA1YCR097W TRM1P15565 570 aaKnown RBP8.81□□□□□ -1
HMRA1YCR097W MMP1Q12372 583 aa8.79□□□□□ -1
HMRA1YCR097W RTT106P40161 455 aa8.77□□□□□ -1.01
HMRA1YCR097W NUP85P46673 744 aa8.77□□□□□ -1.01
HMRA1YCR097W GLY1P37303 387 aaKnown RBP8.75□□□□□ -1.01
HMRA1YCR097W GLN1P32288 370 aaKnown RBP8.74□□□□□ -1.01
HMRA1YCR097W TYW1Q08960 810 aaKnown RBP8.74□□□□□ -1.01
HMRA1YCR097W ATF2P53296 535 aa8.73□□□□□ -1.01
HMRA1YCR097W ESS1P22696 170 aa8.71□□□□□ -1.02
HMRA1YCR097W SCW11P53189 542 aa8.7□□□□□ -1.02
HMRA1YCR097W MIP1P15801 1254 aa8.69□□□□□ -1.02
HMRA1YCR097W VAC17P25591 423 aa8.69□□□□□ -1.02
HMRA1YCR097W TRK2P28584 889 aa8.68□□□□□ -1.02
HMRA1YCR097W YIR007WP40566 764 aa8.68□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms