RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W MTC1P47018 478 aaKnown RBP18.7■□□□□ 0.58
HMRA1YCR097W FAP1P53971 965 aa17.48■□□□□ 0.39
HMRA1YCR097W DRS1P32892 752 aaKnown RBP16.89■□□□□ 0.29
HMRA1YCR097W PRY3P47033 881 aa16.44■□□□□ 0.22
HMRA1YCR097W PRI1P10363 409 aa16.1■□□□□ 0.17
HMRA1YCR097W AAD16Q02895 342 aa16.08■□□□□ 0.16
HMRA1YCR097W ISW2Q08773 1120 aa15.63■□□□□ 0.09
HMRA1YCR097W RPG1P38249 964 aaKnown RBP15.5■□□□□ 0.07
HMRA1YCR097W YCK3P39962 524 aa15.5■□□□□ 0.07
HMRA1YCR097W HAA1Q12753 694 aaKnown RBP15.42■□□□□ 0.06
HMRA1YCR097W TSR3Q12094 313 aaKnown RBP15.18■□□□□ 0.02
HMRA1YCR097W DIP2Q12220 943 aaPredicted RBP15.03■□□□□ -0
HMRA1YCR097W RSE1Q04693 1361 aaKnown RBP14.7□□□□□ -0.06
HMRA1YCR097W MRPL32P25348 183 aa14.61□□□□□ -0.07
HMRA1YCR097W AVT3P36062 692 aa14.32□□□□□ -0.12
HMRA1YCR097W RPL17AP05740 184 aaKnown RBP14.26□□□□□ -0.13
HMRA1YCR097W RPL17BP46990 184 aaKnown RBP14.26□□□□□ -0.13
HMRA1YCR097W REB1P21538 810 aa14.25□□□□□ -0.13
HMRA1YCR097W YGL015CP33199 130 aa14.18□□□□□ -0.14
HMRA1YCR097W BFR2Q06631 534 aaKnown RBP13.77□□□□□ -0.21
HMRA1YCR097W CDC27P38042 758 aa13.75□□□□□ -0.21
HMRA1YCR097W SPT21P35209 758 aa13.59□□□□□ -0.23
HMRA1YCR097W YKR023WP36119 530 aaKnown RBP13.59□□□□□ -0.23
HMRA1YCR097W UBP10P53874 792 aaPredicted RBP13.45□□□□□ -0.26
HMRA1YCR097W MAP2P38174 421 aaKnown RBP13.39□□□□□ -0.27
HMRA1YCR097W TFC8Q12308 588 aa13.31□□□□□ -0.28
HMRA1YCR097W HOP09932 586 aa13.3□□□□□ -0.28
HMRA1YCR097W DCD1P06773 312 aa13.24□□□□□ -0.29
HMRA1YCR097W BUD31P25337 157 aaPredicted RBP13.23□□□□□ -0.29
HMRA1YCR097W RIM101P33400 625 aa13.02□□□□□ -0.33
HMRA1YCR097W SCY1P53009 804 aa13.02□□□□□ -0.33
HMRA1YCR097W TIF4632P39936 914 aaKnown RBP12.91□□□□□ -0.34
HMRA1YCR097W SLX5P32828 619 aaKnown RBP12.9□□□□□ -0.34
HMRA1YCR097W TGL3P40308 642 aa12.87□□□□□ -0.35
HMRA1YCR097W BCH2P36122 765 aa12.85□□□□□ -0.35
HMRA1YCR097W UBP9P39967 754 aa12.66□□□□□ -0.38
HMRA1YCR097W SIS1P25294 352 aaKnown RBP12.55□□□□□ -0.4
HMRA1YCR097W OXP1P28273 1286 aa12.55□□□□□ -0.4
HMRA1YCR097W EPS1P40557 701 aa12.49□□□□□ -0.41
HMRA1YCR097W BDF1P35817 686 aa12.46□□□□□ -0.41
HMRA1YCR097W YIL055CP40523 627 aaKnown RBP12.39□□□□□ -0.43
HMRA1YCR097W PTP3P40048 928 aa12.37□□□□□ -0.43
HMRA1YCR097W MST1P07236 462 aa12.27□□□□□ -0.45
HMRA1YCR097W RSM7P47150 247 aa12.2□□□□□ -0.46
HMRA1YCR097W YOR238WQ08634 303 aa12.2□□□□□ -0.46
HMRA1YCR097W BBC1P47068 1157 aa12.18□□□□□ -0.46
HMRA1YCR097W AI2P03876 854 aa12.13□□□□□ -0.47
HMRA1YCR097W YBL029C-AQ3E756 94 aa12.13□□□□□ -0.47
HMRA1YCR097W NSR1P27476 414 aaKnown RBP RIP-Chip data12.12□□□□□ -0.47 RIP-Chip
HMRA1YCR097W YAH1Q12184 172 aaKnown RBP12.09□□□□□ -0.47
HMRA1YCR097W YAP5P40574 245 aa12.03□□□□□ -0.48
HMRA1YCR097W VNX1P42839 908 aa12□□□□□ -0.49
HMRA1YCR097W TFA1P36100 482 aa11.91□□□□□ -0.5
HMRA1YCR097W SPP1Q03012 353 aa11.89□□□□□ -0.51
HMRA1YCR097W YLR271WQ06152 274 aa11.88□□□□□ -0.51
HMRA1YCR097W WSC3Q12215 556 aa11.88□□□□□ -0.51
HMRA1YCR097W GTT3P39996 337 aa11.77□□□□□ -0.53
HMRA1YCR097W PSD2P53037 1138 aaKnown RBP11.77□□□□□ -0.53
HMRA1YCR097W TIF11P38912 153 aaKnown RBP11.74□□□□□ -0.53
HMRA1YCR097W AIR2Q12476 344 aaKnown RBP11.67□□□□□ -0.54
HMRA1YCR097W MRM1P25270 412 aa11.65□□□□□ -0.54
HMRA1YCR097W PIB1Q06651 286 aa11.65□□□□□ -0.54
HMRA1YCR097W FKH1P40466 484 aa11.64□□□□□ -0.55
HMRA1YCR097W YJL171CP46992 396 aa11.61□□□□□ -0.55
HMRA1YCR097W SSP1P38871 571 aa11.58□□□□□ -0.56
HMRA1YCR097W ULI1P43604 169 aa11.58□□□□□ -0.56
HMRA1YCR097W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.58□□□□□ -0.56not detected
HMRA1YCR097W IOC2Q12072 812 aa11.55□□□□□ -0.56
HMRA1YCR097W LDB19Q12502 818 aa11.55□□□□□ -0.56
HMRA1YCR097W MSB4Q12317 492 aa11.48□□□□□ -0.57
HMRA1YCR097W EAP1P36041 632 aaKnown RBP11.43□□□□□ -0.58
HMRA1YCR097W YMR1P47147 688 aaKnown RBP RIP-Chip data11.43□□□□□ -0.58not detected
HMRA1YCR097W VPS29P38759 282 aa11.42□□□□□ -0.58
HMRA1YCR097W CST9Q06032 482 aa11.41□□□□□ -0.58
HMRA1YCR097W BMT6Q12291 365 aa11.41□□□□□ -0.58
HMRA1YCR097W DBP1P24784 617 aaKnown RBP11.4□□□□□ -0.58
HMRA1YCR097W YOL036WQ08206 761 aa11.39□□□□□ -0.59
HMRA1YCR097W RTG3P38165 486 aa11.38□□□□□ -0.59
HMRA1YCR097W MGA2P40578 1113 aa11.37□□□□□ -0.59
HMRA1YCR097W SET4P42948 560 aa11.37□□□□□ -0.59
HMRA1YCR097W YFR006WP43590 535 aa11.34□□□□□ -0.59
HMRA1YCR097W TRP5P00931 707 aaKnown RBP11.33□□□□□ -0.6
HMRA1YCR097W RTG1P32607 177 aa11.32□□□□□ -0.6
HMRA1YCR097W VMA1P17255 1071 aaKnown RBP11.3□□□□□ -0.6
HMRA1YCR097W STS1P38637 319 aa11.29□□□□□ -0.6
HMRA1YCR097W NCR1Q12200 1170 aa11.28□□□□□ -0.6
HMRA1YCR097W SAM3Q08986 587 aa11.26□□□□□ -0.61
HMRA1YCR097W YNL035CP53962 389 aaKnown RBP11.24□□□□□ -0.61
HMRA1YCR097W SEC61P32915 480 aa11.21□□□□□ -0.61
HMRA1YCR097W RCR1P38212 213 aa11.19□□□□□ -0.62
HMRA1YCR097W TFG1P41895 735 aaPredicted RBP11.09□□□□□ -0.63
HMRA1YCR097W GYP5Q12344 894 aa11.08□□□□□ -0.64
HMRA1YCR097W ABP1P15891 592 aaKnown RBP11.07□□□□□ -0.64
HMRA1YCR097W DAN4P47179 1161 aa11.07□□□□□ -0.64
HMRA1YCR097W JIP4Q03361 876 aa11.07□□□□□ -0.64
HMRA1YCR097W HTA1P04911 132 aaKnown RBP11.01□□□□□ -0.65
HMRA1YCR097W HTA2P04912 132 aa11.01□□□□□ -0.65
HMRA1YCR097W SAP30P38429 201 aa11□□□□□ -0.65
HMRA1YCR097W DCW1P36091 449 aa10.99□□□□□ -0.65
HMRA1YCR097W YDL129WQ07555 291 aa10.96□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 46 ms