Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
PCDHGA8Q9Y5G5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.78■■■□□ 2.84
PCDHGA8Q9Y5G5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.29■■■□□ 2.76
PCDHGA8Q9Y5G5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PCDHGA8Q9Y5G5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PCDHGA8Q9Y5G5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
PCDHGA8Q9Y5G5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
PCDHGA8Q9Y5G5 AL356512.1-201ENST00000607453 1739 ntBASIC31.41■■■□□ 2.62
PCDHGA8Q9Y5G5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
PCDHGA8Q9Y5G5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
PCDHGA8Q9Y5G5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.22■■■□□ 2.59
PCDHGA8Q9Y5G5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
PCDHGA8Q9Y5G5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.02■■■□□ 2.56
PCDHGA8Q9Y5G5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.02■■■□□ 2.56
PCDHGA8Q9Y5G5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
PCDHGA8Q9Y5G5 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.82■■■□□ 2.53
PCDHGA8Q9Y5G5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
PCDHGA8Q9Y5G5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
PCDHGA8Q9Y5G5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.68■■■□□ 2.5
PCDHGA8Q9Y5G5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHGA8Q9Y5G5 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PCDHGA8Q9Y5G5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.6■■■□□ 2.49
PCDHGA8Q9Y5G5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PCDHGA8Q9Y5G5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PCDHGA8Q9Y5G5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PCDHGA8Q9Y5G5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
PCDHGA8Q9Y5G5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.28■■■□□ 2.44
PCDHGA8Q9Y5G5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.27■■■□□ 2.44
PCDHGA8Q9Y5G5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
PCDHGA8Q9Y5G5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PCDHGA8Q9Y5G5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
PCDHGA8Q9Y5G5 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PCDHGA8Q9Y5G5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.06■■■□□ 2.4
PCDHGA8Q9Y5G5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.04■■■□□ 2.4
PCDHGA8Q9Y5G5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCDHGA8Q9Y5G5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
PCDHGA8Q9Y5G5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDHGA8Q9Y5G5 AC006077.2-201ENST00000623591 457 ntBASIC29.86■■■□□ 2.37
PCDHGA8Q9Y5G5 ZNRF2P1-201ENST00000441407 443 ntBASIC29.84■■■□□ 2.37
PCDHGA8Q9Y5G5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.76■■■□□ 2.35
PCDHGA8Q9Y5G5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.65■■■□□ 2.34
PCDHGA8Q9Y5G5 AC015813.7-201ENST00000623294 581 ntBASIC29.63■■■□□ 2.33
PCDHGA8Q9Y5G5 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.61■■■□□ 2.33
PCDHGA8Q9Y5G5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
PCDHGA8Q9Y5G5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHGA8Q9Y5G5 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHGA8Q9Y5G5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.43■■■□□ 2.3
PCDHGA8Q9Y5G5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHGA8Q9Y5G5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
PCDHGA8Q9Y5G5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHGA8Q9Y5G5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.32■■■□□ 2.28
PCDHGA8Q9Y5G5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.31■■■□□ 2.28
PCDHGA8Q9Y5G5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHGA8Q9Y5G5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
PCDHGA8Q9Y5G5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGA8Q9Y5G5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
PCDHGA8Q9Y5G5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
PCDHGA8Q9Y5G5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
PCDHGA8Q9Y5G5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
PCDHGA8Q9Y5G5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
PCDHGA8Q9Y5G5 AP002365.1-201ENST00000603448 772 ntBASIC29.07■■■□□ 2.24
PCDHGA8Q9Y5G5 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
PCDHGA8Q9Y5G5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.99■■■□□ 2.23
PCDHGA8Q9Y5G5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PCDHGA8Q9Y5G5 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.84■■■□□ 2.21
PCDHGA8Q9Y5G5 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.82■■■□□ 2.2
PCDHGA8Q9Y5G5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC28.82■■■□□ 2.2
PCDHGA8Q9Y5G5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.8■■■□□ 2.2
PCDHGA8Q9Y5G5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PCDHGA8Q9Y5G5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
PCDHGA8Q9Y5G5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
PCDHGA8Q9Y5G5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
PCDHGA8Q9Y5G5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
PCDHGA8Q9Y5G5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.69■■■□□ 2.18
PCDHGA8Q9Y5G5 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.68■■■□□ 2.18
PCDHGA8Q9Y5G5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
PCDHGA8Q9Y5G5 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHGA8Q9Y5G5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.66■■■□□ 2.18
PCDHGA8Q9Y5G5 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHGA8Q9Y5G5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.58■■■□□ 2.17
PCDHGA8Q9Y5G5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
PCDHGA8Q9Y5G5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
PCDHGA8Q9Y5G5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.5■■■□□ 2.15
PCDHGA8Q9Y5G5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PCDHGA8Q9Y5G5 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
PCDHGA8Q9Y5G5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PCDHGA8Q9Y5G5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.44■■■□□ 2.14
PCDHGA8Q9Y5G5 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHGA8Q9Y5G5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.43■■■□□ 2.14
PCDHGA8Q9Y5G5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.43■■■□□ 2.14
PCDHGA8Q9Y5G5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
PCDHGA8Q9Y5G5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.4■■■□□ 2.14
PCDHGA8Q9Y5G5 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.39■■■□□ 2.13
PCDHGA8Q9Y5G5 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHGA8Q9Y5G5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PCDHGA8Q9Y5G5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHGA8Q9Y5G5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHGA8Q9Y5G5 DYNLL1-208ENST00000550178 581 ntBASIC28.36■■■□□ 2.13
PCDHGA8Q9Y5G5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PCDHGA8Q9Y5G5 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms