Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
PCDHGB1Q9Y5G3 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.56■■■□□ 2.48
PCDHGB1Q9Y5G3 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PCDHGB1Q9Y5G3 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
PCDHGB1Q9Y5G3 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
PCDHGB1Q9Y5G3 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCDHGB1Q9Y5G3 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
PCDHGB1Q9Y5G3 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.61■■■□□ 2.33
PCDHGB1Q9Y5G3 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHGB1Q9Y5G3 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.39■■■□□ 2.3
PCDHGB1Q9Y5G3 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
PCDHGB1Q9Y5G3 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.33■■■□□ 2.29
PCDHGB1Q9Y5G3 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.25■■■□□ 2.27
PCDHGB1Q9Y5G3 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
PCDHGB1Q9Y5G3 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PCDHGB1Q9Y5G3 AL356512.1-201ENST00000607453 1739 ntBASIC29.17■■■□□ 2.26
PCDHGB1Q9Y5G3 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.98■■■□□ 2.23
PCDHGB1Q9Y5G3 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.91■■■□□ 2.22
PCDHGB1Q9Y5G3 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
PCDHGB1Q9Y5G3 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.8■■■□□ 2.2
PCDHGB1Q9Y5G3 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PCDHGB1Q9Y5G3 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PCDHGB1Q9Y5G3 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PCDHGB1Q9Y5G3 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHGB1Q9Y5G3 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.25■■■□□ 2.11
PCDHGB1Q9Y5G3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
PCDHGB1Q9Y5G3 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PCDHGB1Q9Y5G3 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHGB1Q9Y5G3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHGB1Q9Y5G3 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHGB1Q9Y5G3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PCDHGB1Q9Y5G3 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PCDHGB1Q9Y5G3 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
PCDHGB1Q9Y5G3 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PCDHGB1Q9Y5G3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
PCDHGB1Q9Y5G3 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
PCDHGB1Q9Y5G3 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
PCDHGB1Q9Y5G3 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHGB1Q9Y5G3 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
PCDHGB1Q9Y5G3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
PCDHGB1Q9Y5G3 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.57■■■□□ 2
PCDHGB1Q9Y5G3 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
PCDHGB1Q9Y5G3 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
PCDHGB1Q9Y5G3 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCDHGB1Q9Y5G3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PCDHGB1Q9Y5G3 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC27.4■■□□□ 1.98
PCDHGB1Q9Y5G3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
PCDHGB1Q9Y5G3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
PCDHGB1Q9Y5G3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC27.34■■□□□ 1.97
PCDHGB1Q9Y5G3 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PCDHGB1Q9Y5G3 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
PCDHGB1Q9Y5G3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
PCDHGB1Q9Y5G3 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC27.26■■□□□ 1.95
PCDHGB1Q9Y5G3 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.23■■□□□ 1.95
PCDHGB1Q9Y5G3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
PCDHGB1Q9Y5G3 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDHGB1Q9Y5G3 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDHGB1Q9Y5G3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.04■■□□□ 1.92
PCDHGB1Q9Y5G3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
PCDHGB1Q9Y5G3 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHGB1Q9Y5G3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.98■■□□□ 1.91
PCDHGB1Q9Y5G3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.98■■□□□ 1.91
PCDHGB1Q9Y5G3 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHGB1Q9Y5G3 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHGB1Q9Y5G3 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDHGB1Q9Y5G3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGB1Q9Y5G3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHGB1Q9Y5G3 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
PCDHGB1Q9Y5G3 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDHGB1Q9Y5G3 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHGB1Q9Y5G3 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGB1Q9Y5G3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHGB1Q9Y5G3 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHGB1Q9Y5G3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHGB1Q9Y5G3 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
PCDHGB1Q9Y5G3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.8■■□□□ 1.88
PCDHGB1Q9Y5G3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHGB1Q9Y5G3 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHGB1Q9Y5G3 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHGB1Q9Y5G3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGB1Q9Y5G3 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHGB1Q9Y5G3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.71■■□□□ 1.87
PCDHGB1Q9Y5G3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHGB1Q9Y5G3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PCDHGB1Q9Y5G3 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
PCDHGB1Q9Y5G3 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHGB1Q9Y5G3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGB1Q9Y5G3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGB1Q9Y5G3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
PCDHGB1Q9Y5G3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHGB1Q9Y5G3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGB1Q9Y5G3 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
PCDHGB1Q9Y5G3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
PCDHGB1Q9Y5G3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHGB1Q9Y5G3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGB1Q9Y5G3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.57■■□□□ 1.84
PCDHGB1Q9Y5G3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.57■■□□□ 1.84
PCDHGB1Q9Y5G3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHGB1Q9Y5G3 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
PCDHGB1Q9Y5G3 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.55■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms