Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.6■■■■□ 3.61
PCDHB13Q9Y5F0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
PCDHB13Q9Y5F0 AL356512.1-201ENST00000607453 1739 ntBASIC36.68■■■■□ 3.46
PCDHB13Q9Y5F0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.62■■■■□ 3.45
PCDHB13Q9Y5F0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
PCDHB13Q9Y5F0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
PCDHB13Q9Y5F0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC36.22■■■■□ 3.39
PCDHB13Q9Y5F0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.96■■■■□ 3.35
PCDHB13Q9Y5F0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.88■■■■□ 3.33
PCDHB13Q9Y5F0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.76■■■■□ 3.32
PCDHB13Q9Y5F0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.66■■■■□ 3.3
PCDHB13Q9Y5F0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.57■■■■□ 3.29
PCDHB13Q9Y5F0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.21■■■■□ 3.23
PCDHB13Q9Y5F0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.17■■■■□ 3.22
PCDHB13Q9Y5F0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.12■■■■□ 3.21
PCDHB13Q9Y5F0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.77■■■■□ 3.16
PCDHB13Q9Y5F0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC34.71■■■■□ 3.15
PCDHB13Q9Y5F0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.61■■■■□ 3.13
PCDHB13Q9Y5F0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.58■■■■□ 3.13
PCDHB13Q9Y5F0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.55■■■■□ 3.12
PCDHB13Q9Y5F0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.52■■■■□ 3.12
PCDHB13Q9Y5F0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.45■■■■□ 3.11
PCDHB13Q9Y5F0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.31■■■■□ 3.08
PCDHB13Q9Y5F0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.29■■■■□ 3.08
PCDHB13Q9Y5F0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
PCDHB13Q9Y5F0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.18■■■■□ 3.06
PCDHB13Q9Y5F0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
PCDHB13Q9Y5F0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
PCDHB13Q9Y5F0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.03■■■■□ 3.04
PCDHB13Q9Y5F0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
PCDHB13Q9Y5F0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.79■■■■□ 3
PCDHB13Q9Y5F0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.78■■■■□ 3
PCDHB13Q9Y5F0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.67■■■□□ 2.98
PCDHB13Q9Y5F0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
PCDHB13Q9Y5F0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
PCDHB13Q9Y5F0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.58■■■□□ 2.97
PCDHB13Q9Y5F0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.58■■■□□ 2.97
PCDHB13Q9Y5F0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
PCDHB13Q9Y5F0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
PCDHB13Q9Y5F0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
PCDHB13Q9Y5F0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.47■■■□□ 2.95
PCDHB13Q9Y5F0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
PCDHB13Q9Y5F0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
PCDHB13Q9Y5F0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
PCDHB13Q9Y5F0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.38■■■□□ 2.93
PCDHB13Q9Y5F0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
PCDHB13Q9Y5F0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.3■■■□□ 2.92
PCDHB13Q9Y5F0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.21■■■□□ 2.91
PCDHB13Q9Y5F0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.19■■■□□ 2.9
PCDHB13Q9Y5F0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.18■■■□□ 2.9
PCDHB13Q9Y5F0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC33.16■■■□□ 2.9
PCDHB13Q9Y5F0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
PCDHB13Q9Y5F0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
PCDHB13Q9Y5F0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
PCDHB13Q9Y5F0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.08■■■□□ 2.89
PCDHB13Q9Y5F0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
PCDHB13Q9Y5F0 AC015813.7-201ENST00000623294 581 ntBASIC32.91■■■□□ 2.86
PCDHB13Q9Y5F0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.89■■■□□ 2.86
PCDHB13Q9Y5F0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
PCDHB13Q9Y5F0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
PCDHB13Q9Y5F0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
PCDHB13Q9Y5F0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
PCDHB13Q9Y5F0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PCDHB13Q9Y5F0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.6■■■□□ 2.81
PCDHB13Q9Y5F0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.58■■■□□ 2.81
PCDHB13Q9Y5F0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.57■■■□□ 2.8
PCDHB13Q9Y5F0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
PCDHB13Q9Y5F0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
PCDHB13Q9Y5F0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
PCDHB13Q9Y5F0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.5■■■□□ 2.79
PCDHB13Q9Y5F0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
PCDHB13Q9Y5F0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
PCDHB13Q9Y5F0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
PCDHB13Q9Y5F0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.46■■■□□ 2.79
PCDHB13Q9Y5F0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
PCDHB13Q9Y5F0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
PCDHB13Q9Y5F0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.45■■■□□ 2.79
PCDHB13Q9Y5F0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
PCDHB13Q9Y5F0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PCDHB13Q9Y5F0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
PCDHB13Q9Y5F0 AC006077.2-201ENST00000623591 457 ntBASIC32.32■■■□□ 2.76
PCDHB13Q9Y5F0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
PCDHB13Q9Y5F0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
PCDHB13Q9Y5F0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PCDHB13Q9Y5F0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
PCDHB13Q9Y5F0 ZNRF2P1-201ENST00000441407 443 ntBASIC32.11■■■□□ 2.73
PCDHB13Q9Y5F0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PCDHB13Q9Y5F0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
PCDHB13Q9Y5F0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
PCDHB13Q9Y5F0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
PCDHB13Q9Y5F0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
PCDHB13Q9Y5F0 AC145285.7-201ENST00000614819 1539 ntBASIC32.02■■■□□ 2.72
PCDHB13Q9Y5F0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PCDHB13Q9Y5F0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PCDHB13Q9Y5F0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
PCDHB13Q9Y5F0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCDHB13Q9Y5F0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.93■■■□□ 2.7
PCDHB13Q9Y5F0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PCDHB13Q9Y5F0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.83■■■□□ 2.69
PCDHB13Q9Y5F0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.81■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms