Protein–RNA interactions for Protein: Q9NQX0

PRDM6, Putative histone-lysine N-methyltransferase PRDM6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6Q9NQX0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.02■■■■□ 3.52
PRDM6Q9NQX0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.71■■■■□ 3.47
PRDM6Q9NQX0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.59■■■■□ 3.45
PRDM6Q9NQX0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
PRDM6Q9NQX0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.77■■■■□ 3.32
PRDM6Q9NQX0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
PRDM6Q9NQX0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
PRDM6Q9NQX0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
PRDM6Q9NQX0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.34■■■■□ 3.25
PRDM6Q9NQX0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
PRDM6Q9NQX0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.92■■■■□ 3.18
PRDM6Q9NQX0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC34.92■■■■□ 3.18
PRDM6Q9NQX0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
PRDM6Q9NQX0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
PRDM6Q9NQX0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.78■■■■□ 3.16
PRDM6Q9NQX0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
PRDM6Q9NQX0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
PRDM6Q9NQX0 AL356512.1-201ENST00000607453 1739 ntBASIC34.44■■■■□ 3.1
PRDM6Q9NQX0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
PRDM6Q9NQX0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
PRDM6Q9NQX0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.33■■■■□ 3.09
PRDM6Q9NQX0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.33■■■■□ 3.09
PRDM6Q9NQX0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.23■■■■□ 3.07
PRDM6Q9NQX0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
PRDM6Q9NQX0 ZNRF2P1-201ENST00000441407 443 ntBASIC34.15■■■■□ 3.06
PRDM6Q9NQX0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.13■■■■□ 3.05
PRDM6Q9NQX0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
PRDM6Q9NQX0 AC006077.2-201ENST00000623591 457 ntBASIC34■■■■□ 3.03
PRDM6Q9NQX0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.98■■■■□ 3.03
PRDM6Q9NQX0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.89■■■■□ 3.02
PRDM6Q9NQX0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
PRDM6Q9NQX0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.6■■■□□ 2.97
PRDM6Q9NQX0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.54■■■□□ 2.96
PRDM6Q9NQX0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.49■■■□□ 2.95
PRDM6Q9NQX0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC33.42■■■□□ 2.94
PRDM6Q9NQX0 AC015813.7-201ENST00000623294 581 ntBASIC33.39■■■□□ 2.94
PRDM6Q9NQX0 AP002365.1-201ENST00000603448 772 ntBASIC33.3■■■□□ 2.92
PRDM6Q9NQX0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC33.14■■■□□ 2.9
PRDM6Q9NQX0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
PRDM6Q9NQX0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC33.04■■■□□ 2.88
PRDM6Q9NQX0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC33.02■■■□□ 2.88
PRDM6Q9NQX0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
PRDM6Q9NQX0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.92■■■□□ 2.86
PRDM6Q9NQX0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
PRDM6Q9NQX0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.9■■■□□ 2.86
PRDM6Q9NQX0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.87■■■□□ 2.85
PRDM6Q9NQX0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.85■■■□□ 2.85
PRDM6Q9NQX0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.85■■■□□ 2.85
PRDM6Q9NQX0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.76■■■□□ 2.83
PRDM6Q9NQX0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
PRDM6Q9NQX0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
PRDM6Q9NQX0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
PRDM6Q9NQX0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.64■■■□□ 2.82
PRDM6Q9NQX0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.64■■■□□ 2.82
PRDM6Q9NQX0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
PRDM6Q9NQX0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
PRDM6Q9NQX0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.52■■■□□ 2.8
PRDM6Q9NQX0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.51■■■□□ 2.79
PRDM6Q9NQX0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
PRDM6Q9NQX0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
PRDM6Q9NQX0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.44■■■□□ 2.78
PRDM6Q9NQX0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
PRDM6Q9NQX0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.41■■■□□ 2.78
PRDM6Q9NQX0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.37■■■□□ 2.77
PRDM6Q9NQX0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.35■■■□□ 2.77
PRDM6Q9NQX0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.32■■■□□ 2.77
PRDM6Q9NQX0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.31■■■□□ 2.76
PRDM6Q9NQX0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PRDM6Q9NQX0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.28■■■□□ 2.76
PRDM6Q9NQX0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.25■■■□□ 2.75
PRDM6Q9NQX0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.22■■■□□ 2.75
PRDM6Q9NQX0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.22■■■□□ 2.75
PRDM6Q9NQX0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
PRDM6Q9NQX0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.2■■■□□ 2.75
PRDM6Q9NQX0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.18■■■□□ 2.74
PRDM6Q9NQX0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
PRDM6Q9NQX0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PRDM6Q9NQX0 DYNLL1-208ENST00000550178 581 ntBASIC32.16■■■□□ 2.74
PRDM6Q9NQX0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.14■■■□□ 2.74
PRDM6Q9NQX0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.13■■■□□ 2.73
PRDM6Q9NQX0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.1■■■□□ 2.73
PRDM6Q9NQX0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
PRDM6Q9NQX0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PRDM6Q9NQX0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.04■■■□□ 2.72
PRDM6Q9NQX0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PRDM6Q9NQX0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
PRDM6Q9NQX0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PRDM6Q9NQX0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PRDM6Q9NQX0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.96■■■□□ 2.71
PRDM6Q9NQX0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.9■■■□□ 2.7
PRDM6Q9NQX0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PRDM6Q9NQX0 RPS2P35-201ENST00000443417 897 ntBASIC31.89■■■□□ 2.7
PRDM6Q9NQX0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.89■■■□□ 2.7
PRDM6Q9NQX0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.89■■■□□ 2.7
PRDM6Q9NQX0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
PRDM6Q9NQX0 AL031258.1-201ENST00000623562 325 ntBASIC31.88■■■□□ 2.69
PRDM6Q9NQX0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PRDM6Q9NQX0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PRDM6Q9NQX0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
PRDM6Q9NQX0 RARRES2P7-201ENST00000567349 469 ntBASIC31.76■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms