Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
LYRM4Q9HD34 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
LYRM4Q9HD34 AL356512.1-201ENST00000607453 1739 ntBASIC31.48■■■□□ 2.63
LYRM4Q9HD34 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
LYRM4Q9HD34 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
LYRM4Q9HD34 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
LYRM4Q9HD34 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.09■■■□□ 2.57
LYRM4Q9HD34 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.96■■■□□ 2.55
LYRM4Q9HD34 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.76■■■□□ 2.52
LYRM4Q9HD34 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.62■■■□□ 2.49
LYRM4Q9HD34 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.61■■■□□ 2.49
LYRM4Q9HD34 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.51■■■□□ 2.47
LYRM4Q9HD34 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
LYRM4Q9HD34 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
LYRM4Q9HD34 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
LYRM4Q9HD34 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.9■■■□□ 2.38
LYRM4Q9HD34 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.76■■■□□ 2.35
LYRM4Q9HD34 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
LYRM4Q9HD34 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.7■■■□□ 2.35
LYRM4Q9HD34 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
LYRM4Q9HD34 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
LYRM4Q9HD34 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.51■■■□□ 2.31
LYRM4Q9HD34 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
LYRM4Q9HD34 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.37■■■□□ 2.29
LYRM4Q9HD34 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
LYRM4Q9HD34 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
LYRM4Q9HD34 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
LYRM4Q9HD34 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.25■■■□□ 2.27
LYRM4Q9HD34 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
LYRM4Q9HD34 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
LYRM4Q9HD34 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
LYRM4Q9HD34 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
LYRM4Q9HD34 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
LYRM4Q9HD34 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.85■■■□□ 2.21
LYRM4Q9HD34 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
LYRM4Q9HD34 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.83■■■□□ 2.21
LYRM4Q9HD34 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.8■■■□□ 2.2
LYRM4Q9HD34 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
LYRM4Q9HD34 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
LYRM4Q9HD34 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
LYRM4Q9HD34 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
LYRM4Q9HD34 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
LYRM4Q9HD34 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
LYRM4Q9HD34 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
LYRM4Q9HD34 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.64■■■□□ 2.18
LYRM4Q9HD34 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.54■■■□□ 2.16
LYRM4Q9HD34 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
LYRM4Q9HD34 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
LYRM4Q9HD34 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
LYRM4Q9HD34 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.15
LYRM4Q9HD34 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
LYRM4Q9HD34 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.35■■■□□ 2.13
LYRM4Q9HD34 AC015813.7-201ENST00000623294 581 ntBASIC28.29■■■□□ 2.12
LYRM4Q9HD34 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
LYRM4Q9HD34 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
LYRM4Q9HD34 ILK-212ENST00000532063 1617 ntTSL 2 BASIC28.22■■■□□ 2.11
LYRM4Q9HD34 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
LYRM4Q9HD34 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
LYRM4Q9HD34 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LYRM4Q9HD34 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC28.02■■■□□ 2.08
LYRM4Q9HD34 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.02■■■□□ 2.08
LYRM4Q9HD34 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
LYRM4Q9HD34 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
LYRM4Q9HD34 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
LYRM4Q9HD34 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
LYRM4Q9HD34 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.94■■■□□ 2.06
LYRM4Q9HD34 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
LYRM4Q9HD34 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
LYRM4Q9HD34 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
LYRM4Q9HD34 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
LYRM4Q9HD34 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
LYRM4Q9HD34 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
LYRM4Q9HD34 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.04
LYRM4Q9HD34 AC006077.2-201ENST00000623591 457 ntBASIC27.82■■■□□ 2.04
LYRM4Q9HD34 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
LYRM4Q9HD34 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.81■■■□□ 2.04
LYRM4Q9HD34 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.8■■■□□ 2.04
LYRM4Q9HD34 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
LYRM4Q9HD34 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
LYRM4Q9HD34 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
LYRM4Q9HD34 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.71■■■□□ 2.03
LYRM4Q9HD34 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
LYRM4Q9HD34 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
LYRM4Q9HD34 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
LYRM4Q9HD34 ZNRF2P1-201ENST00000441407 443 ntBASIC27.65■■■□□ 2.02
LYRM4Q9HD34 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
LYRM4Q9HD34 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.56■■■□□ 2
LYRM4Q9HD34 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.53■■■□□ 2
LYRM4Q9HD34 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
LYRM4Q9HD34 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
LYRM4Q9HD34 AC145285.7-201ENST00000614819 1539 ntBASIC27.47■■□□□ 1.99
LYRM4Q9HD34 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
LYRM4Q9HD34 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
LYRM4Q9HD34 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
LYRM4Q9HD34 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.41■■□□□ 1.98
LYRM4Q9HD34 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
LYRM4Q9HD34 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
LYRM4Q9HD34 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
LYRM4Q9HD34 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.37■■□□□ 1.97
LYRM4Q9HD34 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms