Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.86■■■■□ 3.33
CDK5RAP1Q96SZ6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
CDK5RAP1Q96SZ6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CDK5RAP1Q96SZ6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.79■■■■□ 3.16
CDK5RAP1Q96SZ6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.77■■■■□ 3.16
CDK5RAP1Q96SZ6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CDK5RAP1Q96SZ6 AL356512.1-201ENST00000607453 1739 ntBASIC34.7■■■■□ 3.15
CDK5RAP1Q96SZ6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.12■■■■□ 3.05
CDK5RAP1Q96SZ6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.05■■■■□ 3.04
CDK5RAP1Q96SZ6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.82■■■■□ 3
CDK5RAP1Q96SZ6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.67■■■□□ 2.98
CDK5RAP1Q96SZ6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.55■■■□□ 2.96
CDK5RAP1Q96SZ6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.47■■■□□ 2.95
CDK5RAP1Q96SZ6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
CDK5RAP1Q96SZ6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.36■■■□□ 2.93
CDK5RAP1Q96SZ6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.22■■■□□ 2.91
CDK5RAP1Q96SZ6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CDK5RAP1Q96SZ6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.18■■■□□ 2.9
CDK5RAP1Q96SZ6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.13■■■□□ 2.89
CDK5RAP1Q96SZ6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.1■■■□□ 2.89
CDK5RAP1Q96SZ6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
CDK5RAP1Q96SZ6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
CDK5RAP1Q96SZ6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CDK5RAP1Q96SZ6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
CDK5RAP1Q96SZ6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CDK5RAP1Q96SZ6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CDK5RAP1Q96SZ6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
CDK5RAP1Q96SZ6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CDK5RAP1Q96SZ6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CDK5RAP1Q96SZ6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CDK5RAP1Q96SZ6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CDK5RAP1Q96SZ6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.18■■■□□ 2.74
CDK5RAP1Q96SZ6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.11■■■□□ 2.73
CDK5RAP1Q96SZ6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.98■■■□□ 2.71
CDK5RAP1Q96SZ6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.97■■■□□ 2.71
CDK5RAP1Q96SZ6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CDK5RAP1Q96SZ6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.87■■■□□ 2.69
CDK5RAP1Q96SZ6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.82■■■□□ 2.68
CDK5RAP1Q96SZ6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CDK5RAP1Q96SZ6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CDK5RAP1Q96SZ6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CDK5RAP1Q96SZ6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
CDK5RAP1Q96SZ6 AC015813.7-201ENST00000623294 581 ntBASIC31.66■■■□□ 2.66
CDK5RAP1Q96SZ6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
CDK5RAP1Q96SZ6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CDK5RAP1Q96SZ6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.56■■■□□ 2.64
CDK5RAP1Q96SZ6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.54■■■□□ 2.64
CDK5RAP1Q96SZ6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.51■■■□□ 2.63
CDK5RAP1Q96SZ6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.46■■■□□ 2.63
CDK5RAP1Q96SZ6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDK5RAP1Q96SZ6 AC006077.2-201ENST00000623591 457 ntBASIC31.41■■■□□ 2.62
CDK5RAP1Q96SZ6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CDK5RAP1Q96SZ6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
CDK5RAP1Q96SZ6 ZNRF2P1-201ENST00000441407 443 ntBASIC31.26■■■□□ 2.59
CDK5RAP1Q96SZ6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.25■■■□□ 2.59
CDK5RAP1Q96SZ6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
CDK5RAP1Q96SZ6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CDK5RAP1Q96SZ6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.12■■■□□ 2.57
CDK5RAP1Q96SZ6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CDK5RAP1Q96SZ6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CDK5RAP1Q96SZ6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CDK5RAP1Q96SZ6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
CDK5RAP1Q96SZ6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDK5RAP1Q96SZ6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDK5RAP1Q96SZ6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31■■■□□ 2.55
CDK5RAP1Q96SZ6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
CDK5RAP1Q96SZ6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.94■■■□□ 2.54
CDK5RAP1Q96SZ6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CDK5RAP1Q96SZ6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDK5RAP1Q96SZ6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CDK5RAP1Q96SZ6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CDK5RAP1Q96SZ6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
CDK5RAP1Q96SZ6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CDK5RAP1Q96SZ6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.63■■■□□ 2.49
CDK5RAP1Q96SZ6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CDK5RAP1Q96SZ6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CDK5RAP1Q96SZ6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CDK5RAP1Q96SZ6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.56■■■□□ 2.48
CDK5RAP1Q96SZ6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
CDK5RAP1Q96SZ6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
CDK5RAP1Q96SZ6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDK5RAP1Q96SZ6 AP002365.1-201ENST00000603448 772 ntBASIC30.49■■■□□ 2.47
CDK5RAP1Q96SZ6 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.47■■■□□ 2.47
CDK5RAP1Q96SZ6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CDK5RAP1Q96SZ6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.46■■■□□ 2.47
CDK5RAP1Q96SZ6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
CDK5RAP1Q96SZ6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CDK5RAP1Q96SZ6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CDK5RAP1Q96SZ6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDK5RAP1Q96SZ6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDK5RAP1Q96SZ6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
CDK5RAP1Q96SZ6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.31■■■□□ 2.44
CDK5RAP1Q96SZ6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.3■■■□□ 2.44
CDK5RAP1Q96SZ6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
CDK5RAP1Q96SZ6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.29■■■□□ 2.44
CDK5RAP1Q96SZ6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.27■■■□□ 2.44
CDK5RAP1Q96SZ6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CDK5RAP1Q96SZ6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.25■■■□□ 2.43
CDK5RAP1Q96SZ6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CDK5RAP1Q96SZ6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms