Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.38■■■■□ 3.57
ACAP3Q96P50 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
ACAP3Q96P50 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.25■■■■□ 3.39
ACAP3Q96P50 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
ACAP3Q96P50 AL356512.1-201ENST00000607453 1739 ntBASIC36.19■■■■□ 3.38
ACAP3Q96P50 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.18■■■■□ 3.38
ACAP3Q96P50 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
ACAP3Q96P50 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.52■■■■□ 3.28
ACAP3Q96P50 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.43■■■■□ 3.26
ACAP3Q96P50 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.23■■■■□ 3.23
ACAP3Q96P50 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.12■■■■□ 3.21
ACAP3Q96P50 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.94■■■■□ 3.18
ACAP3Q96P50 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.88■■■■□ 3.17
ACAP3Q96P50 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.78■■■■□ 3.16
ACAP3Q96P50 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.76■■■■□ 3.16
ACAP3Q96P50 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
ACAP3Q96P50 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.6■■■■□ 3.13
ACAP3Q96P50 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.58■■■■□ 3.13
ACAP3Q96P50 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.52■■■■□ 3.12
ACAP3Q96P50 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.51■■■■□ 3.12
ACAP3Q96P50 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.24■■■■□ 3.07
ACAP3Q96P50 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.88■■■■□ 3.01
ACAP3Q96P50 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
ACAP3Q96P50 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
ACAP3Q96P50 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.81■■■■□ 3
ACAP3Q96P50 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
ACAP3Q96P50 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
ACAP3Q96P50 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
ACAP3Q96P50 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.61■■■□□ 2.97
ACAP3Q96P50 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.59■■■□□ 2.97
ACAP3Q96P50 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
ACAP3Q96P50 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.52■■■□□ 2.96
ACAP3Q96P50 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.4■■■□□ 2.94
ACAP3Q96P50 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
ACAP3Q96P50 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.35■■■□□ 2.93
ACAP3Q96P50 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
ACAP3Q96P50 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.29■■■□□ 2.92
ACAP3Q96P50 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.23■■■□□ 2.91
ACAP3Q96P50 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
ACAP3Q96P50 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
ACAP3Q96P50 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ACAP3Q96P50 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
ACAP3Q96P50 AC015813.7-201ENST00000623294 581 ntBASIC33.01■■■□□ 2.87
ACAP3Q96P50 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33■■■□□ 2.87
ACAP3Q96P50 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33■■■□□ 2.87
ACAP3Q96P50 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33■■■□□ 2.87
ACAP3Q96P50 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
ACAP3Q96P50 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.88■■■□□ 2.85
ACAP3Q96P50 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
ACAP3Q96P50 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.78■■■□□ 2.84
ACAP3Q96P50 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.75■■■□□ 2.83
ACAP3Q96P50 AC006077.2-201ENST00000623591 457 ntBASIC32.67■■■□□ 2.82
ACAP3Q96P50 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.63■■■□□ 2.81
ACAP3Q96P50 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
ACAP3Q96P50 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.58■■■□□ 2.81
ACAP3Q96P50 ZNRF2P1-201ENST00000441407 443 ntBASIC32.54■■■□□ 2.8
ACAP3Q96P50 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.54■■■□□ 2.8
ACAP3Q96P50 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
ACAP3Q96P50 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
ACAP3Q96P50 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
ACAP3Q96P50 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
ACAP3Q96P50 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
ACAP3Q96P50 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.37■■■□□ 2.77
ACAP3Q96P50 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
ACAP3Q96P50 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
ACAP3Q96P50 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
ACAP3Q96P50 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
ACAP3Q96P50 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
ACAP3Q96P50 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.15■■■□□ 2.74
ACAP3Q96P50 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ACAP3Q96P50 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
ACAP3Q96P50 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
ACAP3Q96P50 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ACAP3Q96P50 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ACAP3Q96P50 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.92■■■□□ 2.7
ACAP3Q96P50 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ACAP3Q96P50 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
ACAP3Q96P50 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
ACAP3Q96P50 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.81■■■□□ 2.68
ACAP3Q96P50 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
ACAP3Q96P50 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ACAP3Q96P50 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
ACAP3Q96P50 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
ACAP3Q96P50 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.75■■■□□ 2.67
ACAP3Q96P50 AP002365.1-201ENST00000603448 772 ntBASIC31.75■■■□□ 2.67
ACAP3Q96P50 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
ACAP3Q96P50 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ACAP3Q96P50 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.73■■■□□ 2.67
ACAP3Q96P50 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ACAP3Q96P50 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ACAP3Q96P50 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
ACAP3Q96P50 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ACAP3Q96P50 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.62■■■□□ 2.65
ACAP3Q96P50 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.61■■■□□ 2.65
ACAP3Q96P50 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.59■■■□□ 2.65
ACAP3Q96P50 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
ACAP3Q96P50 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
ACAP3Q96P50 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.54■■■□□ 2.64
ACAP3Q96P50 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
ACAP3Q96P50 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms