Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.86■■■■□ 3.17
PCDH20Q8N6Y1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
PCDH20Q8N6Y1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.81■■■■□ 3
PCDH20Q8N6Y1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
PCDH20Q8N6Y1 AL356512.1-201ENST00000607453 1739 ntBASIC33.76■■■□□ 2.99
PCDH20Q8N6Y1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.75■■■□□ 2.99
PCDH20Q8N6Y1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
PCDH20Q8N6Y1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.11■■■□□ 2.89
PCDH20Q8N6Y1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.1■■■□□ 2.89
PCDH20Q8N6Y1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.88■■■□□ 2.85
PCDH20Q8N6Y1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.78■■■□□ 2.84
PCDH20Q8N6Y1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.6■■■□□ 2.81
PCDH20Q8N6Y1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.56■■■□□ 2.8
PCDH20Q8N6Y1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.43■■■□□ 2.78
PCDH20Q8N6Y1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
PCDH20Q8N6Y1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
PCDH20Q8N6Y1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.29■■■□□ 2.76
PCDH20Q8N6Y1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.28■■■□□ 2.76
PCDH20Q8N6Y1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.19■■■□□ 2.74
PCDH20Q8N6Y1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.18■■■□□ 2.74
PCDH20Q8N6Y1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
PCDH20Q8N6Y1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.94■■■□□ 2.7
PCDH20Q8N6Y1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
PCDH20Q8N6Y1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
PCDH20Q8N6Y1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PCDH20Q8N6Y1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
PCDH20Q8N6Y1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PCDH20Q8N6Y1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCDH20Q8N6Y1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PCDH20Q8N6Y1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PCDH20Q8N6Y1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PCDH20Q8N6Y1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
PCDH20Q8N6Y1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PCDH20Q8N6Y1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.23■■■□□ 2.59
PCDH20Q8N6Y1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PCDH20Q8N6Y1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
PCDH20Q8N6Y1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.09■■■□□ 2.57
PCDH20Q8N6Y1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.09■■■□□ 2.57
PCDH20Q8N6Y1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
PCDH20Q8N6Y1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PCDH20Q8N6Y1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31■■■□□ 2.55
PCDH20Q8N6Y1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
PCDH20Q8N6Y1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDH20Q8N6Y1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
PCDH20Q8N6Y1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDH20Q8N6Y1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
PCDH20Q8N6Y1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
PCDH20Q8N6Y1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.52
PCDH20Q8N6Y1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PCDH20Q8N6Y1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.75■■■□□ 2.51
PCDH20Q8N6Y1 AC015813.7-201ENST00000623294 581 ntBASIC30.75■■■□□ 2.51
PCDH20Q8N6Y1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.69■■■□□ 2.5
PCDH20Q8N6Y1 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.56■■■□□ 2.48
PCDH20Q8N6Y1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.54■■■□□ 2.48
PCDH20Q8N6Y1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
PCDH20Q8N6Y1 AC006077.2-201ENST00000623591 457 ntBASIC30.45■■■□□ 2.47
PCDH20Q8N6Y1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
PCDH20Q8N6Y1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
PCDH20Q8N6Y1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.37■■■□□ 2.45
PCDH20Q8N6Y1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PCDH20Q8N6Y1 ZNRF2P1-201ENST00000441407 443 ntBASIC30.33■■■□□ 2.45
PCDH20Q8N6Y1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
PCDH20Q8N6Y1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.32■■■□□ 2.44
PCDH20Q8N6Y1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDH20Q8N6Y1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PCDH20Q8N6Y1 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PCDH20Q8N6Y1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
PCDH20Q8N6Y1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.18■■■□□ 2.42
PCDH20Q8N6Y1 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
PCDH20Q8N6Y1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCDH20Q8N6Y1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PCDH20Q8N6Y1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PCDH20Q8N6Y1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
PCDH20Q8N6Y1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.04■■■□□ 2.4
PCDH20Q8N6Y1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PCDH20Q8N6Y1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PCDH20Q8N6Y1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PCDH20Q8N6Y1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
PCDH20Q8N6Y1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PCDH20Q8N6Y1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PCDH20Q8N6Y1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.76■■■□□ 2.35
PCDH20Q8N6Y1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
PCDH20Q8N6Y1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
PCDH20Q8N6Y1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCDH20Q8N6Y1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.67■■■□□ 2.34
PCDH20Q8N6Y1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
PCDH20Q8N6Y1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
PCDH20Q8N6Y1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
PCDH20Q8N6Y1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.6■■■□□ 2.33
PCDH20Q8N6Y1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PCDH20Q8N6Y1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.59■■■□□ 2.33
PCDH20Q8N6Y1 AP002365.1-201ENST00000603448 772 ntBASIC29.59■■■□□ 2.33
PCDH20Q8N6Y1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDH20Q8N6Y1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDH20Q8N6Y1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
PCDH20Q8N6Y1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.45■■■□□ 2.31
PCDH20Q8N6Y1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.45■■■□□ 2.31
PCDH20Q8N6Y1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.45■■■□□ 2.3
PCDH20Q8N6Y1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDH20Q8N6Y1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.41■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms