Protein–RNA interactions for Protein: Q86WI1

PKHD1L1, Fibrocystin-L, humanhuman

Predictions only

Length 4,243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1Q86WI1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21■□□□□ 0.95
PKHD1L1Q86WI1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC20.73■□□□□ 0.91
PKHD1L1Q86WI1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
PKHD1L1Q86WI1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PKHD1L1Q86WI1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PKHD1L1Q86WI1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PKHD1L1Q86WI1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PKHD1L1Q86WI1 AL356512.1-201ENST00000607453 1739 ntBASIC19.99■□□□□ 0.79
PKHD1L1Q86WI1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PKHD1L1Q86WI1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.88■□□□□ 0.77
PKHD1L1Q86WI1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PKHD1L1Q86WI1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC19.81■□□□□ 0.76
PKHD1L1Q86WI1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.81■□□□□ 0.76
PKHD1L1Q86WI1 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PKHD1L1Q86WI1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PKHD1L1Q86WI1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PKHD1L1Q86WI1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PKHD1L1Q86WI1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PKHD1L1Q86WI1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PKHD1L1Q86WI1 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PKHD1L1Q86WI1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
PKHD1L1Q86WI1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PKHD1L1Q86WI1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKHD1L1Q86WI1 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKHD1L1Q86WI1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.26■□□□□ 0.67
PKHD1L1Q86WI1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKHD1L1Q86WI1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PKHD1L1Q86WI1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC19.23■□□□□ 0.67
PKHD1L1Q86WI1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC19.23■□□□□ 0.67
PKHD1L1Q86WI1 ZNRF2P1-201ENST00000441407 443 ntBASIC19.1■□□□□ 0.65
PKHD1L1Q86WI1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.1■□□□□ 0.65
PKHD1L1Q86WI1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PKHD1L1Q86WI1 AC006077.2-201ENST00000623591 457 ntBASIC19.06■□□□□ 0.64
PKHD1L1Q86WI1 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.99■□□□□ 0.63
PKHD1L1Q86WI1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC18.93■□□□□ 0.62
PKHD1L1Q86WI1 AC015813.7-201ENST00000623294 581 ntBASIC18.91■□□□□ 0.62
PKHD1L1Q86WI1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PKHD1L1Q86WI1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC18.84■□□□□ 0.61
PKHD1L1Q86WI1 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PKHD1L1Q86WI1 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.76■□□□□ 0.59
PKHD1L1Q86WI1 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PKHD1L1Q86WI1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PKHD1L1Q86WI1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PKHD1L1Q86WI1 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
PKHD1L1Q86WI1 AP002365.1-201ENST00000603448 772 ntBASIC18.6■□□□□ 0.57
PKHD1L1Q86WI1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PKHD1L1Q86WI1 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PKHD1L1Q86WI1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PKHD1L1Q86WI1 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.5■□□□□ 0.55
PKHD1L1Q86WI1 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.49■□□□□ 0.55
PKHD1L1Q86WI1 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PKHD1L1Q86WI1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC18.44■□□□□ 0.54
PKHD1L1Q86WI1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PKHD1L1Q86WI1 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.42■□□□□ 0.54
PKHD1L1Q86WI1 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PKHD1L1Q86WI1 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.39■□□□□ 0.53
PKHD1L1Q86WI1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PKHD1L1Q86WI1 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.35■□□□□ 0.53
PKHD1L1Q86WI1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKHD1L1Q86WI1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
PKHD1L1Q86WI1 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PKHD1L1Q86WI1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PKHD1L1Q86WI1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PKHD1L1Q86WI1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PKHD1L1Q86WI1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PKHD1L1Q86WI1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PKHD1L1Q86WI1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PKHD1L1Q86WI1 DYNLL1-208ENST00000550178 581 ntBASIC18.19■□□□□ 0.5
PKHD1L1Q86WI1 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC18.19■□□□□ 0.5
PKHD1L1Q86WI1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC18.19■□□□□ 0.5
PKHD1L1Q86WI1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PKHD1L1Q86WI1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PKHD1L1Q86WI1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PKHD1L1Q86WI1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PKHD1L1Q86WI1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PKHD1L1Q86WI1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.13■□□□□ 0.49
PKHD1L1Q86WI1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PKHD1L1Q86WI1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PKHD1L1Q86WI1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PKHD1L1Q86WI1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.08■□□□□ 0.48
PKHD1L1Q86WI1 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PKHD1L1Q86WI1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PKHD1L1Q86WI1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PKHD1L1Q86WI1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PKHD1L1Q86WI1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.02■□□□□ 0.48
PKHD1L1Q86WI1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
PKHD1L1Q86WI1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PKHD1L1Q86WI1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PKHD1L1Q86WI1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.99■□□□□ 0.47
PKHD1L1Q86WI1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKHD1L1Q86WI1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PKHD1L1Q86WI1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.98■□□□□ 0.47
PKHD1L1Q86WI1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.97■□□□□ 0.47
PKHD1L1Q86WI1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.97■□□□□ 0.47
PKHD1L1Q86WI1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.96■□□□□ 0.46
PKHD1L1Q86WI1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PKHD1L1Q86WI1 AL031258.1-201ENST00000623562 325 ntBASIC17.95■□□□□ 0.46
PKHD1L1Q86WI1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC17.94■□□□□ 0.46
PKHD1L1Q86WI1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.92■□□□□ 0.46
PKHD1L1Q86WI1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms