Protein–RNA interactions for Protein: Q86UQ4

ABCA13, ATP-binding cassette sub-family A member 13, humanhuman

Predictions only

Length 5,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13Q86UQ4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC21.95■■□□□ 1.1
ABCA13Q86UQ4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
ABCA13Q86UQ4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ABCA13Q86UQ4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA13Q86UQ4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC21.27■■□□□ 1
ABCA13Q86UQ4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ABCA13Q86UQ4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ABCA13Q86UQ4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA13Q86UQ4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ABCA13Q86UQ4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC20.88■□□□□ 0.93
ABCA13Q86UQ4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ABCA13Q86UQ4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ABCA13Q86UQ4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC20.7■□□□□ 0.9
ABCA13Q86UQ4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ABCA13Q86UQ4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ABCA13Q86UQ4 ZNRF2P1-201ENST00000441407 443 ntBASIC20.5■□□□□ 0.87
ABCA13Q86UQ4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.5■□□□□ 0.87
ABCA13Q86UQ4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ABCA13Q86UQ4 AC006077.2-201ENST00000623591 457 ntBASIC20.33■□□□□ 0.85
ABCA13Q86UQ4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA13Q86UQ4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ABCA13Q86UQ4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ABCA13Q86UQ4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ABCA13Q86UQ4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.23■□□□□ 0.83
ABCA13Q86UQ4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.21■□□□□ 0.83
ABCA13Q86UQ4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ABCA13Q86UQ4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.18■□□□□ 0.82
ABCA13Q86UQ4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ABCA13Q86UQ4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ABCA13Q86UQ4 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ABCA13Q86UQ4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ABCA13Q86UQ4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.9■□□□□ 0.78
ABCA13Q86UQ4 AP002365.1-201ENST00000603448 772 ntBASIC19.89■□□□□ 0.77
ABCA13Q86UQ4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.85■□□□□ 0.77
ABCA13Q86UQ4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ABCA13Q86UQ4 AL356512.1-201ENST00000607453 1739 ntBASIC19.84■□□□□ 0.77
ABCA13Q86UQ4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
ABCA13Q86UQ4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
ABCA13Q86UQ4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCA13Q86UQ4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCA13Q86UQ4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
ABCA13Q86UQ4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ABCA13Q86UQ4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
ABCA13Q86UQ4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.64■□□□□ 0.74
ABCA13Q86UQ4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ABCA13Q86UQ4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ABCA13Q86UQ4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.63■□□□□ 0.73
ABCA13Q86UQ4 AC015813.7-201ENST00000623294 581 ntBASIC19.63■□□□□ 0.73
ABCA13Q86UQ4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ABCA13Q86UQ4 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ABCA13Q86UQ4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ABCA13Q86UQ4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC19.45■□□□□ 0.7
ABCA13Q86UQ4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ABCA13Q86UQ4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ABCA13Q86UQ4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.41■□□□□ 0.7
ABCA13Q86UQ4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.41■□□□□ 0.7
ABCA13Q86UQ4 RPS2P35-201ENST00000443417 897 ntBASIC19.38■□□□□ 0.69
ABCA13Q86UQ4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA13Q86UQ4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.35■□□□□ 0.69
ABCA13Q86UQ4 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.34■□□□□ 0.69
ABCA13Q86UQ4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCA13Q86UQ4 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.32■□□□□ 0.68
ABCA13Q86UQ4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCA13Q86UQ4 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.24■□□□□ 0.67
ABCA13Q86UQ4 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.22■□□□□ 0.67
ABCA13Q86UQ4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ABCA13Q86UQ4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ABCA13Q86UQ4 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA13Q86UQ4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ABCA13Q86UQ4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.14■□□□□ 0.66
ABCA13Q86UQ4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ABCA13Q86UQ4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ABCA13Q86UQ4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.11■□□□□ 0.65
ABCA13Q86UQ4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ABCA13Q86UQ4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
ABCA13Q86UQ4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ABCA13Q86UQ4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ABCA13Q86UQ4 DYNLL1-208ENST00000550178 581 ntBASIC19.04■□□□□ 0.64
ABCA13Q86UQ4 RARRES2P7-201ENST00000567349 469 ntBASIC19.03■□□□□ 0.64
ABCA13Q86UQ4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ABCA13Q86UQ4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.03■□□□□ 0.64
ABCA13Q86UQ4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.01■□□□□ 0.63
ABCA13Q86UQ4 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19■□□□□ 0.63
ABCA13Q86UQ4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19■□□□□ 0.63
ABCA13Q86UQ4 SUZ12P1-203ENST00000578195 985 ntBASIC18.99■□□□□ 0.63
ABCA13Q86UQ4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC18.99■□□□□ 0.63
ABCA13Q86UQ4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ABCA13Q86UQ4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.97■□□□□ 0.63
ABCA13Q86UQ4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA13Q86UQ4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ABCA13Q86UQ4 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.91■□□□□ 0.62
ABCA13Q86UQ4 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.91■□□□□ 0.62
ABCA13Q86UQ4 AC136428.2-201ENST00000563187 214 ntBASIC18.9■□□□□ 0.62
ABCA13Q86UQ4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ABCA13Q86UQ4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA13Q86UQ4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ABCA13Q86UQ4 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ABCA13Q86UQ4 AC097358.2-201ENST00000607541 1159 ntBASIC18.82■□□□□ 0.6
ABCA13Q86UQ4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA13Q86UQ4 AL031258.1-201ENST00000623562 325 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms