Protein–RNA interactions for Protein: Q86UQ4

ABCA13, ATP-binding cassette sub-family A member 13, humanhuman

Predictions only

Length 5,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13Q86UQ4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ABCA13Q86UQ4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.76■□□□□ 0.59
ABCA13Q86UQ4 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ABCA13Q86UQ4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ABCA13Q86UQ4 AL162393.1-201ENST00000437852 946 ntBASIC18.7■□□□□ 0.58
ABCA13Q86UQ4 HLA-V-202ENST00000446817 847 ntBASIC18.7■□□□□ 0.58
ABCA13Q86UQ4 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.7■□□□□ 0.58
ABCA13Q86UQ4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ABCA13Q86UQ4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ABCA13Q86UQ4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.68■□□□□ 0.58
ABCA13Q86UQ4 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA13Q86UQ4 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ABCA13Q86UQ4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ABCA13Q86UQ4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.65■□□□□ 0.58
ABCA13Q86UQ4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA13Q86UQ4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ABCA13Q86UQ4 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.61■□□□□ 0.57
ABCA13Q86UQ4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.6■□□□□ 0.57
ABCA13Q86UQ4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.59■□□□□ 0.57
ABCA13Q86UQ4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ABCA13Q86UQ4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.58■□□□□ 0.56
ABCA13Q86UQ4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.56■□□□□ 0.56
ABCA13Q86UQ4 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.56■□□□□ 0.56
ABCA13Q86UQ4 SETD8P1-201ENST00000623146 1180 ntBASIC18.54■□□□□ 0.56
ABCA13Q86UQ4 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ABCA13Q86UQ4 ABHD17AP4-201ENST00000411545 909 ntBASIC18.53■□□□□ 0.56
ABCA13Q86UQ4 MIR7108-201ENST00000614319 87 ntBASIC18.53■□□□□ 0.56
ABCA13Q86UQ4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCA13Q86UQ4 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCA13Q86UQ4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCA13Q86UQ4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ABCA13Q86UQ4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC18.43■□□□□ 0.54
ABCA13Q86UQ4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ABCA13Q86UQ4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
ABCA13Q86UQ4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ABCA13Q86UQ4 AP006261.1-201ENST00000584783 668 ntBASIC18.39■□□□□ 0.53
ABCA13Q86UQ4 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.39■□□□□ 0.53
ABCA13Q86UQ4 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ABCA13Q86UQ4 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.36■□□□□ 0.53
ABCA13Q86UQ4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ABCA13Q86UQ4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCA13Q86UQ4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ABCA13Q86UQ4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.34■□□□□ 0.53
ABCA13Q86UQ4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC18.33■□□□□ 0.53
ABCA13Q86UQ4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ABCA13Q86UQ4 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ABCA13Q86UQ4 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ABCA13Q86UQ4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ABCA13Q86UQ4 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.28■□□□□ 0.52
ABCA13Q86UQ4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.26■□□□□ 0.51
ABCA13Q86UQ4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ABCA13Q86UQ4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ABCA13Q86UQ4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.25■□□□□ 0.51
ABCA13Q86UQ4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ABCA13Q86UQ4 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.25■□□□□ 0.51
ABCA13Q86UQ4 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ABCA13Q86UQ4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA13Q86UQ4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC18.24■□□□□ 0.51
ABCA13Q86UQ4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ABCA13Q86UQ4 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.23■□□□□ 0.51
ABCA13Q86UQ4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.22■□□□□ 0.51
ABCA13Q86UQ4 CAHM-201ENST00000604200 896 ntBASIC18.22■□□□□ 0.51
ABCA13Q86UQ4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ABCA13Q86UQ4 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ABCA13Q86UQ4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.18■□□□□ 0.5
ABCA13Q86UQ4 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.17■□□□□ 0.5
ABCA13Q86UQ4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ABCA13Q86UQ4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.16■□□□□ 0.5
ABCA13Q86UQ4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.16■□□□□ 0.5
ABCA13Q86UQ4 AL391121.1-201ENST00000607967 1349 ntBASIC18.16■□□□□ 0.5
ABCA13Q86UQ4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ABCA13Q86UQ4 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.14■□□□□ 0.49
ABCA13Q86UQ4 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
ABCA13Q86UQ4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ABCA13Q86UQ4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ABCA13Q86UQ4 HSD17B1P1-201ENST00000590052 955 ntBASIC18.13■□□□□ 0.49
ABCA13Q86UQ4 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ABCA13Q86UQ4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.1■□□□□ 0.49
ABCA13Q86UQ4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.1■□□□□ 0.49
ABCA13Q86UQ4 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.1■□□□□ 0.49
ABCA13Q86UQ4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCA13Q86UQ4 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.09■□□□□ 0.49
ABCA13Q86UQ4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.09■□□□□ 0.49
ABCA13Q86UQ4 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.08■□□□□ 0.49
ABCA13Q86UQ4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.08■□□□□ 0.49
ABCA13Q86UQ4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.08■□□□□ 0.48
ABCA13Q86UQ4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ABCA13Q86UQ4 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.07■□□□□ 0.48
ABCA13Q86UQ4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.06■□□□□ 0.48
ABCA13Q86UQ4 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ABCA13Q86UQ4 MIR3665-201ENST00000578708 105 ntBASIC18.04■□□□□ 0.48
ABCA13Q86UQ4 AC087741.3-201ENST00000624270 1347 ntBASIC18.03■□□□□ 0.48
ABCA13Q86UQ4 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ABCA13Q86UQ4 MIR4449-201ENST00000578365 66 ntBASIC18.03■□□□□ 0.48
ABCA13Q86UQ4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.02■□□□□ 0.48
ABCA13Q86UQ4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ABCA13Q86UQ4 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ABCA13Q86UQ4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCA13Q86UQ4 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
ABCA13Q86UQ4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms