Protein–RNA interactions for Protein: Q6WN34

CHRDL2, Chordin-like protein 2, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2Q6WN34 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC38.64■■■■□ 3.78
CHRDL2Q6WN34 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC38.31■■■■□ 3.72
CHRDL2Q6WN34 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.94■■■■□ 3.66
CHRDL2Q6WN34 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC37.37■■■■□ 3.57
CHRDL2Q6WN34 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
CHRDL2Q6WN34 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
CHRDL2Q6WN34 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
CHRDL2Q6WN34 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC36.92■■■■□ 3.5
CHRDL2Q6WN34 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC36.9■■■■□ 3.5
CHRDL2Q6WN34 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.65■■■■□ 3.46
CHRDL2Q6WN34 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC36.48■■■■□ 3.43
CHRDL2Q6WN34 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
CHRDL2Q6WN34 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC36.33■■■■□ 3.41
CHRDL2Q6WN34 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
CHRDL2Q6WN34 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC36.14■■■■□ 3.38
CHRDL2Q6WN34 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
CHRDL2Q6WN34 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.06■■■■□ 3.36
CHRDL2Q6WN34 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC35.93■■■■□ 3.34
CHRDL2Q6WN34 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC35.8■■■■□ 3.32
CHRDL2Q6WN34 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CHRDL2Q6WN34 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
CHRDL2Q6WN34 AL356512.1-201ENST00000607453 1739 ntBASIC35.71■■■■□ 3.31
CHRDL2Q6WN34 ZNRF2P1-201ENST00000441407 443 ntBASIC35.71■■■■□ 3.31
CHRDL2Q6WN34 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC35.64■■■■□ 3.3
CHRDL2Q6WN34 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.55■■■■□ 3.28
CHRDL2Q6WN34 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CHRDL2Q6WN34 AC006077.2-201ENST00000623591 457 ntBASIC35.54■■■■□ 3.28
CHRDL2Q6WN34 INO80B-203ENST00000409917 796 ntTSL 2 BASIC35.48■■■■□ 3.27
CHRDL2Q6WN34 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC35.37■■■■□ 3.25
CHRDL2Q6WN34 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.29■■■■□ 3.24
CHRDL2Q6WN34 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
CHRDL2Q6WN34 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC35.03■■■■□ 3.2
CHRDL2Q6WN34 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
CHRDL2Q6WN34 AP002365.1-201ENST00000603448 772 ntBASIC34.79■■■■□ 3.16
CHRDL2Q6WN34 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.78■■■■□ 3.16
CHRDL2Q6WN34 AC015813.7-201ENST00000623294 581 ntBASIC34.73■■■■□ 3.15
CHRDL2Q6WN34 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.71■■■■□ 3.15
CHRDL2Q6WN34 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC34.62■■■■□ 3.13
CHRDL2Q6WN34 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
CHRDL2Q6WN34 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC34.44■■■■□ 3.1
CHRDL2Q6WN34 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC34.43■■■■□ 3.1
CHRDL2Q6WN34 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
CHRDL2Q6WN34 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC34.33■■■■□ 3.09
CHRDL2Q6WN34 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
CHRDL2Q6WN34 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC34.3■■■■□ 3.08
CHRDL2Q6WN34 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC34.3■■■■□ 3.08
CHRDL2Q6WN34 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC34.28■■■■□ 3.08
CHRDL2Q6WN34 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
CHRDL2Q6WN34 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC34.23■■■■□ 3.07
CHRDL2Q6WN34 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC34.2■■■■□ 3.07
CHRDL2Q6WN34 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
CHRDL2Q6WN34 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC34.03■■■■□ 3.04
CHRDL2Q6WN34 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC33.97■■■■□ 3.03
CHRDL2Q6WN34 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
CHRDL2Q6WN34 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC33.85■■■■□ 3.01
CHRDL2Q6WN34 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
CHRDL2Q6WN34 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC33.82■■■■□ 3
CHRDL2Q6WN34 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
CHRDL2Q6WN34 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
CHRDL2Q6WN34 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.79■■■■□ 3
CHRDL2Q6WN34 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.79■■■■□ 3
CHRDL2Q6WN34 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC33.76■■■■□ 3
CHRDL2Q6WN34 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.73■■■□□ 2.99
CHRDL2Q6WN34 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC33.68■■■□□ 2.98
CHRDL2Q6WN34 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.68■■■□□ 2.98
CHRDL2Q6WN34 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC33.65■■■□□ 2.98
CHRDL2Q6WN34 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC33.63■■■□□ 2.97
CHRDL2Q6WN34 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC33.63■■■□□ 2.97
CHRDL2Q6WN34 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC33.62■■■□□ 2.97
CHRDL2Q6WN34 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC33.62■■■□□ 2.97
CHRDL2Q6WN34 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33.62■■■□□ 2.97
CHRDL2Q6WN34 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC33.58■■■□□ 2.97
CHRDL2Q6WN34 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.56■■■□□ 2.96
CHRDL2Q6WN34 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC33.56■■■□□ 2.96
CHRDL2Q6WN34 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.53■■■□□ 2.96
CHRDL2Q6WN34 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC33.53■■■□□ 2.96
CHRDL2Q6WN34 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
CHRDL2Q6WN34 DYNLL1-208ENST00000550178 581 ntBASIC33.45■■■□□ 2.95
CHRDL2Q6WN34 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CHRDL2Q6WN34 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.42■■■□□ 2.94
CHRDL2Q6WN34 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHRDL2Q6WN34 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.4■■■□□ 2.94
CHRDL2Q6WN34 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC33.38■■■□□ 2.93
CHRDL2Q6WN34 RPS2P35-201ENST00000443417 897 ntBASIC33.32■■■□□ 2.92
CHRDL2Q6WN34 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CHRDL2Q6WN34 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CHRDL2Q6WN34 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC33.29■■■□□ 2.92
CHRDL2Q6WN34 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CHRDL2Q6WN34 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHRDL2Q6WN34 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.25■■■□□ 2.91
CHRDL2Q6WN34 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.25■■■□□ 2.91
CHRDL2Q6WN34 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
CHRDL2Q6WN34 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC33.24■■■□□ 2.91
CHRDL2Q6WN34 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC33.23■■■□□ 2.91
CHRDL2Q6WN34 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC33.23■■■□□ 2.91
CHRDL2Q6WN34 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
CHRDL2Q6WN34 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.19■■■□□ 2.9
CHRDL2Q6WN34 RARRES2P7-201ENST00000567349 469 ntBASIC33.17■■■□□ 2.9
CHRDL2Q6WN34 AL031258.1-201ENST00000623562 325 ntBASIC33.15■■■□□ 2.9
CHRDL2Q6WN34 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms