Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.26■■■■□ 3.56
PBX3P40426 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.58■■■■□ 3.45
PBX3P40426 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.22■■■■□ 3.39
PBX3P40426 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.05■■■■□ 3.36
PBX3P40426 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
PBX3P40426 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.92■■■■□ 3.34
PBX3P40426 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
PBX3P40426 AL356512.1-201ENST00000607453 1739 ntBASIC35.7■■■■□ 3.31
PBX3P40426 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.12■■■■□ 3.21
PBX3P40426 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.94■■■■□ 3.18
PBX3P40426 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.93■■■■□ 3.18
PBX3P40426 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.88■■■■□ 3.17
PBX3P40426 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.84■■■■□ 3.17
PBX3P40426 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.73■■■■□ 3.15
PBX3P40426 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.69■■■■□ 3.14
PBX3P40426 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
PBX3P40426 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.57■■■■□ 3.13
PBX3P40426 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.48■■■■□ 3.11
PBX3P40426 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
PBX3P40426 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.3■■■■□ 3.08
PBX3P40426 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.15■■■■□ 3.06
PBX3P40426 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
PBX3P40426 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.09■■■■□ 3.05
PBX3P40426 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
PBX3P40426 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
PBX3P40426 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
PBX3P40426 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.94■■■■□ 3.02
PBX3P40426 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
PBX3P40426 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.82■■■■□ 3
PBX3P40426 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.77■■■■□ 3
PBX3P40426 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
PBX3P40426 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
PBX3P40426 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.46■■■□□ 2.95
PBX3P40426 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.3■■■□□ 2.92
PBX3P40426 AC015813.7-201ENST00000623294 581 ntBASIC33.24■■■□□ 2.91
PBX3P40426 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.23■■■□□ 2.91
PBX3P40426 AC006077.2-201ENST00000623591 457 ntBASIC33.21■■■□□ 2.91
PBX3P40426 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.2■■■□□ 2.91
PBX3P40426 ZNRF2P1-201ENST00000441407 443 ntBASIC33.2■■■□□ 2.91
PBX3P40426 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
PBX3P40426 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.14■■■□□ 2.9
PBX3P40426 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
PBX3P40426 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
PBX3P40426 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
PBX3P40426 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
PBX3P40426 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
PBX3P40426 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
PBX3P40426 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
PBX3P40426 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.73■■■□□ 2.83
PBX3P40426 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.69■■■□□ 2.82
PBX3P40426 AP002365.1-201ENST00000603448 772 ntBASIC32.42■■■□□ 2.78
PBX3P40426 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
PBX3P40426 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.33■■■□□ 2.77
PBX3P40426 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.31■■■□□ 2.76
PBX3P40426 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PBX3P40426 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PBX3P40426 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.26■■■□□ 2.75
PBX3P40426 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.25■■■□□ 2.75
PBX3P40426 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.23■■■□□ 2.75
PBX3P40426 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.19■■■□□ 2.74
PBX3P40426 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
PBX3P40426 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PBX3P40426 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.18■■■□□ 2.74
PBX3P40426 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PBX3P40426 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.16■■■□□ 2.74
PBX3P40426 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
PBX3P40426 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.14■■■□□ 2.74
PBX3P40426 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
PBX3P40426 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.14■■■□□ 2.74
PBX3P40426 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
PBX3P40426 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.08■■■□□ 2.73
PBX3P40426 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
PBX3P40426 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
PBX3P40426 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
PBX3P40426 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
PBX3P40426 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.03■■■□□ 2.72
PBX3P40426 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.03■■■□□ 2.72
PBX3P40426 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PBX3P40426 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32■■■□□ 2.71
PBX3P40426 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
PBX3P40426 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
PBX3P40426 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.91■■■□□ 2.7
PBX3P40426 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.87■■■□□ 2.69
PBX3P40426 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.87■■■□□ 2.69
PBX3P40426 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PBX3P40426 DYNLL1-208ENST00000550178 581 ntBASIC31.87■■■□□ 2.69
PBX3P40426 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PBX3P40426 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.83■■■□□ 2.69
PBX3P40426 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
PBX3P40426 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PBX3P40426 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PBX3P40426 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PBX3P40426 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.78■■■□□ 2.68
PBX3P40426 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PBX3P40426 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
PBX3P40426 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
PBX3P40426 AL031258.1-201ENST00000623562 325 ntBASIC31.61■■■□□ 2.65
PBX3P40426 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
PBX3P40426 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PBX3P40426 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms