Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.64■■■□□ 2.98not detected
RPS3P23396 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95not detected
RPS3P23396 AL356512.1-201ENST00000607453 1739 ntBASIC32.9■■■□□ 2.86not detected
RPS3P23396 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.81■■■□□ 2.84not detected
RPS3P23396 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.6■■■□□ 2.81not detected
RPS3P23396 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8not detected
RPS3P23396 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.84e-8■■■□□ 16.2
RPS3P23396 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.28■■■□□ 2.76not detected
RPS3P23396 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.28■■■□□ 2.76not detected
RPS3P23396 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC32.06■■■□□ 2.72not detected
RPS3P23396 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.98■■■□□ 2.71not detected
RPS3P23396 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.96■■■□□ 2.71not detected
RPS3P23396 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64not detected
RPS3P23396 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63not detected
RPS3P23396 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61not detected
RPS3P23396 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.13■■■□□ 2.57not detected
RPS3P23396 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.575e-7■■■■□ 24.1
RPS3P23396 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.07■■■□□ 2.56not detected
RPS3P23396 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.94■■■□□ 2.54not detected
RPS3P23396 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54not detected
RPS3P23396 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.87■■■□□ 2.53not detected
RPS3P23396 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53not detected
RPS3P23396 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53not detected
RPS3P23396 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC30.83■■■□□ 2.53not detected
RPS3P23396 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.538e-7■■■■□ 23
RPS3P23396 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5not detected
RPS3P23396 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.491e-7■■□□□ 12.8
RPS3P23396 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.6■■■□□ 2.494e-7■■■□□ 15.2
RPS3P23396 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC30.55■■■□□ 2.481e-6■■□□□ 13
RPS3P23396 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48not detected
RPS3P23396 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46not detected
RPS3P23396 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44not detected
RPS3P23396 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43not detected
RPS3P23396 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.2■■■□□ 2.43not detected
RPS3P23396 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.421e-6■■□□□ 13.4
RPS3P23396 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42not detected
RPS3P23396 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.411e-14■■□□□ 13.9
RPS3P23396 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.06■■■□□ 2.4not detected
RPS3P23396 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.43e-6■■■■■ 27.2
RPS3P23396 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.386e-7■■■□□ 18.5
RPS3P23396 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38not detected
RPS3P23396 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37not detected
RPS3P23396 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC29.83■■■□□ 2.37not detected
RPS3P23396 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36not detected
RPS3P23396 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36not detected
RPS3P23396 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.364e-7■■■□□ 15.2
RPS3P23396 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.75■■■□□ 2.35not detected
RPS3P23396 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.74■■■□□ 2.353e-8■■■□□ 17.1
RPS3P23396 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.354e-6■■■■■ 32.6
RPS3P23396 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.69■■■□□ 2.34not detected
RPS3P23396 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.67■■■□□ 2.34not detected
RPS3P23396 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC29.66■■■□□ 2.34not detected
RPS3P23396 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34not detected
RPS3P23396 INO80B-203ENST00000409917 796 ntTSL 2 BASIC29.6■■■□□ 2.33not detected
RPS3P23396 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.59■■■□□ 2.33not detected
RPS3P23396 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.48■■■□□ 2.31not detected
RPS3P23396 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31not detected
RPS3P23396 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31e-8■■■□□ 16.1
RPS3P23396 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3not detected
RPS3P23396 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3not detected
RPS3P23396 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.42■■■□□ 2.3not detected
RPS3P23396 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.294e-9■■■□□ 15.5
RPS3P23396 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.37■■■□□ 2.29not detected
RPS3P23396 AC015813.7-201ENST00000623294 581 ntBASIC29.35■■■□□ 2.29not detected
RPS3P23396 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.281e-8■■■■□ 21.5
RPS3P23396 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28not detected
RPS3P23396 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.25■■■□□ 2.274e-9■■■□□ 15.5
RPS3P23396 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27not detected
RPS3P23396 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26not detected
RPS3P23396 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26not detected
RPS3P23396 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26not detected
RPS3P23396 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.15■■■□□ 2.26not detected
RPS3P23396 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.251e-7■■■■■ 36.3
RPS3P23396 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.12■■■□□ 2.25not detected
RPS3P23396 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.245e-7■□□□□ 8.4
RPS3P23396 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.03■■■□□ 2.24not detected
RPS3P23396 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29■■■□□ 2.23not detected
RPS3P23396 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.225e-9■■■■■ 27.8
RPS3P23396 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.94■■■□□ 2.22not detected
RPS3P23396 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.91■■■□□ 2.22not detected
RPS3P23396 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.91■■■□□ 2.22not detected
RPS3P23396 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.214e-8■■■■□ 19.7
RPS3P23396 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.86■■■□□ 2.214e-6■□□□□ 9
RPS3P23396 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.218e-7■■□□□ 14.4
RPS3P23396 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC28.82■■■□□ 2.2not detected
RPS3P23396 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.8■■■□□ 2.2not detected
RPS3P23396 AC145285.7-201ENST00000614819 1539 ntBASIC28.79■■■□□ 2.2not detected
RPS3P23396 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2not detected
RPS3P23396 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.76■■■□□ 2.19not detected
RPS3P23396 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19not detected
RPS3P23396 AC006077.2-201ENST00000623591 457 ntBASIC28.74■■■□□ 2.19not detected
RPS3P23396 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19not detected
RPS3P23396 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.7■■■□□ 2.19not detected
RPS3P23396 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.188e-19■■■■□ 21.8
RPS3P23396 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC28.69■■■□□ 2.18not detected
RPS3P23396 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.66■■■□□ 2.18not detected
RPS3P23396 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17not detected
RPS3P23396 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16not detected
RPS3P23396 ZNRF2P1-201ENST00000441407 443 ntBASIC28.55■■■□□ 2.16not detected
RPS3P23396 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.49■■■□□ 2.154e-7■■□□□ 12.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms