Protein–RNA interactions for Protein: P17706

PTPN2, Tyrosine-protein phosphatase non-receptor type 2, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2P17706 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.31■■■■□ 3.4
PTPN2P17706 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.67■■■■□ 3.3
PTPN2P17706 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.33■■■■□ 3.25
PTPN2P17706 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.12■■■■□ 3.21
PTPN2P17706 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
PTPN2P17706 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
PTPN2P17706 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.01■■■■□ 3.2
PTPN2P17706 AL356512.1-201ENST00000607453 1739 ntBASIC34.8■■■■□ 3.16
PTPN2P17706 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.23■■■■□ 3.07
PTPN2P17706 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.03■■■■□ 3.04
PTPN2P17706 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.98■■■■□ 3.03
PTPN2P17706 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.94■■■■□ 3.02
PTPN2P17706 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.91■■■■□ 3.02
PTPN2P17706 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.89■■■■□ 3.02
PTPN2P17706 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.73■■■□□ 2.99
PTPN2P17706 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.7■■■□□ 2.99
PTPN2P17706 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.65■■■□□ 2.98
PTPN2P17706 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
PTPN2P17706 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.45■■■□□ 2.94
PTPN2P17706 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
PTPN2P17706 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.29■■■□□ 2.92
PTPN2P17706 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
PTPN2P17706 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
PTPN2P17706 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
PTPN2P17706 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
PTPN2P17706 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
PTPN2P17706 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.04■■■□□ 2.88
PTPN2P17706 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.01■■■□□ 2.87
PTPN2P17706 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
PTPN2P17706 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.86■■■□□ 2.85
PTPN2P17706 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
PTPN2P17706 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
PTPN2P17706 AC015813.7-201ENST00000623294 581 ntBASIC32.42■■■□□ 2.78
PTPN2P17706 AC006077.2-201ENST00000623591 457 ntBASIC32.41■■■□□ 2.78
PTPN2P17706 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.4■■■□□ 2.78
PTPN2P17706 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.4■■■□□ 2.78
PTPN2P17706 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.37■■■□□ 2.77
PTPN2P17706 ZNRF2P1-201ENST00000441407 443 ntBASIC32.34■■■□□ 2.77
PTPN2P17706 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.33■■■□□ 2.77
PTPN2P17706 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.33■■■□□ 2.77
PTPN2P17706 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PTPN2P17706 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
PTPN2P17706 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PTPN2P17706 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
PTPN2P17706 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
PTPN2P17706 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
PTPN2P17706 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
PTPN2P17706 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
PTPN2P17706 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
PTPN2P17706 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.8■■■□□ 2.68
PTPN2P17706 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
PTPN2P17706 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
PTPN2P17706 AP002365.1-201ENST00000603448 772 ntBASIC31.53■■■□□ 2.64
PTPN2P17706 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PTPN2P17706 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PTPN2P17706 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.43■■■□□ 2.62
PTPN2P17706 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PTPN2P17706 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PTPN2P17706 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.4■■■□□ 2.62
PTPN2P17706 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.4■■■□□ 2.62
PTPN2P17706 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.34■■■□□ 2.61
PTPN2P17706 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.33■■■□□ 2.61
PTPN2P17706 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PTPN2P17706 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.32■■■□□ 2.6
PTPN2P17706 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.3■■■□□ 2.6
PTPN2P17706 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PTPN2P17706 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.28■■■□□ 2.6
PTPN2P17706 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PTPN2P17706 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
PTPN2P17706 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
PTPN2P17706 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.25■■■□□ 2.59
PTPN2P17706 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.24■■■□□ 2.59
PTPN2P17706 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PTPN2P17706 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.23■■■□□ 2.59
PTPN2P17706 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
PTPN2P17706 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.17■■■□□ 2.58
PTPN2P17706 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
PTPN2P17706 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
PTPN2P17706 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.14■■■□□ 2.57
PTPN2P17706 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
PTPN2P17706 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.13■■■□□ 2.57
PTPN2P17706 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.1■■■□□ 2.57
PTPN2P17706 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN2P17706 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.56
PTPN2P17706 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31■■■□□ 2.55
PTPN2P17706 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
PTPN2P17706 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
PTPN2P17706 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PTPN2P17706 DYNLL1-208ENST00000550178 581 ntBASIC30.96■■■□□ 2.55
PTPN2P17706 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.53
PTPN2P17706 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
PTPN2P17706 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
PTPN2P17706 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.86■■■□□ 2.53
PTPN2P17706 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.84■■■□□ 2.53
PTPN2P17706 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PTPN2P17706 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
PTPN2P17706 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PTPN2P17706 AL031258.1-201ENST00000623562 325 ntBASIC30.74■■■□□ 2.51
PTPN2P17706 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PTPN2P17706 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms