Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.25■■■■□ 3.07
WNT1P04628 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.62■■■□□ 2.97
WNT1P04628 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
WNT1P04628 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.12■■■□□ 2.89
WNT1P04628 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
WNT1P04628 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
WNT1P04628 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
WNT1P04628 AL356512.1-201ENST00000607453 1739 ntBASIC32.82■■■□□ 2.84
WNT1P04628 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
WNT1P04628 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.09■■■□□ 2.73
WNT1P04628 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.06■■■□□ 2.72
WNT1P04628 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.02■■■□□ 2.72
WNT1P04628 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32■■■□□ 2.71
WNT1P04628 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.91■■■□□ 2.7
WNT1P04628 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
WNT1P04628 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
WNT1P04628 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
WNT1P04628 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.75■■■□□ 2.67
WNT1P04628 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.56■■■□□ 2.64
WNT1P04628 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
WNT1P04628 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
WNT1P04628 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
WNT1P04628 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.35■■■□□ 2.61
WNT1P04628 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
WNT1P04628 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
WNT1P04628 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
WNT1P04628 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.14■■■□□ 2.58
WNT1P04628 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
WNT1P04628 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.04■■■□□ 2.56
WNT1P04628 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
WNT1P04628 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
WNT1P04628 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
WNT1P04628 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
WNT1P04628 AC015813.7-201ENST00000623294 581 ntBASIC30.57■■■□□ 2.48
WNT1P04628 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.55■■■□□ 2.48
WNT1P04628 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.55■■■□□ 2.48
WNT1P04628 AC006077.2-201ENST00000623591 457 ntBASIC30.52■■■□□ 2.48
WNT1P04628 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.51■■■□□ 2.48
WNT1P04628 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
WNT1P04628 ZNRF2P1-201ENST00000441407 443 ntBASIC30.49■■■□□ 2.47
WNT1P04628 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.42■■■□□ 2.46
WNT1P04628 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
WNT1P04628 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
WNT1P04628 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
WNT1P04628 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
WNT1P04628 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
WNT1P04628 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
WNT1P04628 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
WNT1P04628 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
WNT1P04628 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30■■■□□ 2.39
WNT1P04628 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
WNT1P04628 AP002365.1-201ENST00000603448 772 ntBASIC29.75■■■□□ 2.35
WNT1P04628 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
WNT1P04628 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.68■■■□□ 2.34
WNT1P04628 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.66■■■□□ 2.34
WNT1P04628 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
WNT1P04628 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.63■■■□□ 2.33
WNT1P04628 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.62■■■□□ 2.33
WNT1P04628 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.6■■■□□ 2.33
WNT1P04628 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
WNT1P04628 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
WNT1P04628 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
WNT1P04628 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.54■■■□□ 2.32
WNT1P04628 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.54■■■□□ 2.32
WNT1P04628 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.53■■■□□ 2.32
WNT1P04628 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.53■■■□□ 2.32
WNT1P04628 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
WNT1P04628 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.5■■■□□ 2.31
WNT1P04628 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
WNT1P04628 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
WNT1P04628 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
WNT1P04628 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC29.46■■■□□ 2.31
WNT1P04628 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
WNT1P04628 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
WNT1P04628 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
WNT1P04628 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.42■■■□□ 2.3
WNT1P04628 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.41■■■□□ 2.3
WNT1P04628 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.41■■■□□ 2.3
WNT1P04628 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
WNT1P04628 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.37■■■□□ 2.29
WNT1P04628 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC29.31■■■□□ 2.28
WNT1P04628 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
WNT1P04628 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
WNT1P04628 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
WNT1P04628 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
WNT1P04628 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
WNT1P04628 DYNLL1-208ENST00000550178 581 ntBASIC29.25■■■□□ 2.27
WNT1P04628 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
WNT1P04628 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.24■■■□□ 2.27
WNT1P04628 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
WNT1P04628 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.18■■■□□ 2.26
WNT1P04628 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
WNT1P04628 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
WNT1P04628 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.16■■■□□ 2.26
WNT1P04628 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
WNT1P04628 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
WNT1P04628 AL031258.1-201ENST00000623562 325 ntBASIC29.04■■■□□ 2.24
WNT1P04628 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
WNT1P04628 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
WNT1P04628 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms