Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.98■■■■□ 3.51
SOD2P04179 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.33■■■■□ 3.41
SOD2P04179 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.98■■■■□ 3.35
SOD2P04179 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
SOD2P04179 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.76■■■■□ 3.32
SOD2P04179 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.31
SOD2P04179 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.65■■■■□ 3.3
SOD2P04179 AL356512.1-201ENST00000607453 1739 ntBASIC35.44■■■■□ 3.26
SOD2P04179 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.83■■■■□ 3.17
SOD2P04179 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.64■■■■□ 3.14
SOD2P04179 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.63■■■■□ 3.13
SOD2P04179 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC34.58■■■■□ 3.13
SOD2P04179 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.56■■■■□ 3.12
SOD2P04179 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.5■■■■□ 3.11
SOD2P04179 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.38■■■■□ 3.09
SOD2P04179 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
SOD2P04179 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.27■■■■□ 3.08
SOD2P04179 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
SOD2P04179 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.09■■■■□ 3.05
SOD2P04179 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
SOD2P04179 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.9■■■■□ 3.02
SOD2P04179 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
SOD2P04179 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.85■■■■□ 3.01
SOD2P04179 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.7■■■□□ 2.99
SOD2P04179 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
SOD2P04179 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
SOD2P04179 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.61■■■□□ 2.97
SOD2P04179 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
SOD2P04179 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.53■■■□□ 2.96
SOD2P04179 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.43■■■□□ 2.94
SOD2P04179 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
SOD2P04179 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
SOD2P04179 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.02■■■□□ 2.88
SOD2P04179 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
SOD2P04179 AC015813.7-201ENST00000623294 581 ntBASIC32.98■■■□□ 2.87
SOD2P04179 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.97■■■□□ 2.87
SOD2P04179 AC006077.2-201ENST00000623591 457 ntBASIC32.97■■■□□ 2.87
SOD2P04179 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.93■■■□□ 2.86
SOD2P04179 ZNRF2P1-201ENST00000441407 443 ntBASIC32.92■■■□□ 2.86
SOD2P04179 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SOD2P04179 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.88■■■□□ 2.85
SOD2P04179 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
SOD2P04179 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SOD2P04179 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
SOD2P04179 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
SOD2P04179 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SOD2P04179 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SOD2P04179 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
SOD2P04179 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
SOD2P04179 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.39■■■□□ 2.78
SOD2P04179 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SOD2P04179 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
SOD2P04179 AP002365.1-201ENST00000603448 772 ntBASIC32.1■■■□□ 2.73
SOD2P04179 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.01■■■□□ 2.71
SOD2P04179 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32■■■□□ 2.71
SOD2P04179 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32■■■□□ 2.71
SOD2P04179 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SOD2P04179 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SOD2P04179 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SOD2P04179 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
SOD2P04179 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.93■■■□□ 2.7
SOD2P04179 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
SOD2P04179 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.91■■■□□ 2.7
SOD2P04179 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.9■■■□□ 2.7
SOD2P04179 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
SOD2P04179 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
SOD2P04179 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.86■■■□□ 2.69
SOD2P04179 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SOD2P04179 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
SOD2P04179 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.81■■■□□ 2.68
SOD2P04179 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SOD2P04179 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SOD2P04179 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
SOD2P04179 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.8■■■□□ 2.68
SOD2P04179 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.76■■■□□ 2.67
SOD2P04179 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.75■■■□□ 2.67
SOD2P04179 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SOD2P04179 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC31.71■■■□□ 2.67
SOD2P04179 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
SOD2P04179 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.68■■■□□ 2.66
SOD2P04179 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.66■■■□□ 2.66
SOD2P04179 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
SOD2P04179 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
SOD2P04179 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
SOD2P04179 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SOD2P04179 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
SOD2P04179 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.55■■■□□ 2.64
SOD2P04179 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
SOD2P04179 DYNLL1-208ENST00000550178 581 ntBASIC31.53■■■□□ 2.64
SOD2P04179 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
SOD2P04179 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
SOD2P04179 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.43■■■□□ 2.62
SOD2P04179 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SOD2P04179 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SOD2P04179 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.4■■■□□ 2.62
SOD2P04179 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SOD2P04179 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SOD2P04179 AL031258.1-201ENST00000623562 325 ntBASIC31.3■■■□□ 2.6
SOD2P04179 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SOD2P04179 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms