Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.88■■■■□ 3.17
LMNAP02545 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.51■■■■□ 3.12
LMNAP02545 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.44■■■■□ 3.1
LMNAP02545 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
LMNAP02545 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.52■■■□□ 2.96
LMNAP02545 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
LMNAP02545 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.33■■■□□ 2.93
LMNAP02545 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.28■■■□□ 2.92
LMNAP02545 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
LMNAP02545 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
LMNAP02545 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
LMNAP02545 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.05■■■□□ 2.88
LMNAP02545 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
LMNAP02545 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
LMNAP02545 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.79■■■□□ 2.84
LMNAP02545 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.67■■■□□ 2.82
LMNAP02545 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
LMNAP02545 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
LMNAP02545 AL356512.1-201ENST00000607453 1739 ntBASIC32.51■■■□□ 2.8
LMNAP02545 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
LMNAP02545 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
LMNAP02545 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.38■■■□□ 2.77
LMNAP02545 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.27■■■□□ 2.76
LMNAP02545 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
LMNAP02545 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
LMNAP02545 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.18■■■□□ 2.74
LMNAP02545 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
LMNAP02545 ZNRF2P1-201ENST00000441407 443 ntBASIC32.09■■■□□ 2.73
LMNAP02545 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.07■■■□□ 2.72
LMNAP02545 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
LMNAP02545 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
LMNAP02545 AC006077.2-201ENST00000623591 457 ntBASIC32.01■■■□□ 2.71
LMNAP02545 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.95■■■□□ 2.71
LMNAP02545 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
LMNAP02545 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
LMNAP02545 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.82■■■□□ 2.68
LMNAP02545 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC31.69■■■□□ 2.66
LMNAP02545 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
LMNAP02545 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.61■■■□□ 2.65
LMNAP02545 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
LMNAP02545 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
LMNAP02545 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC31.39■■■□□ 2.62
LMNAP02545 AC015813.7-201ENST00000623294 581 ntBASIC31.38■■■□□ 2.61
LMNAP02545 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
LMNAP02545 AP002365.1-201ENST00000603448 772 ntBASIC31.25■■■□□ 2.59
LMNAP02545 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.14■■■□□ 2.58
LMNAP02545 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
LMNAP02545 HES6-203ENST00000409160 1600 ntTSL 2 BASIC31.09■■■□□ 2.57
LMNAP02545 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
LMNAP02545 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.06■■■□□ 2.56
LMNAP02545 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
LMNAP02545 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LMNAP02545 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.93■■■□□ 2.54
LMNAP02545 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.91■■■□□ 2.54
LMNAP02545 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
LMNAP02545 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LMNAP02545 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.81■■■□□ 2.52
LMNAP02545 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.78■■■□□ 2.52
LMNAP02545 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
LMNAP02545 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.75■■■□□ 2.51
LMNAP02545 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
LMNAP02545 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.73■■■□□ 2.51
LMNAP02545 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.69■■■□□ 2.5
LMNAP02545 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.66■■■□□ 2.5
LMNAP02545 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.62■■■□□ 2.49
LMNAP02545 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
LMNAP02545 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
LMNAP02545 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.58■■■□□ 2.49
LMNAP02545 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
LMNAP02545 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
LMNAP02545 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC30.56■■■□□ 2.48
LMNAP02545 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.51■■■□□ 2.47
LMNAP02545 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.49■■■□□ 2.47
LMNAP02545 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.47■■■□□ 2.47
LMNAP02545 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
LMNAP02545 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.46
LMNAP02545 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
LMNAP02545 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
LMNAP02545 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
LMNAP02545 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.33■■■□□ 2.45
LMNAP02545 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
LMNAP02545 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.32■■■□□ 2.44
LMNAP02545 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.31■■■□□ 2.44
LMNAP02545 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
LMNAP02545 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
LMNAP02545 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
LMNAP02545 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
LMNAP02545 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
LMNAP02545 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
LMNAP02545 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
LMNAP02545 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.14■■■□□ 2.42
LMNAP02545 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
LMNAP02545 DYNLL1-208ENST00000550178 581 ntBASIC30.14■■■□□ 2.42
LMNAP02545 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.11■■■□□ 2.41
LMNAP02545 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
LMNAP02545 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
LMNAP02545 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
LMNAP02545 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.1■■■□□ 2.41
LMNAP02545 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.07■■■□□ 2.4
LMNAP02545 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms