Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.76■■■■□ 3.48
NCK2O43639 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.66■■■■□ 3.46
NCK2O43639 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.26■■■■□ 3.4
NCK2O43639 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
NCK2O43639 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
NCK2O43639 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
NCK2O43639 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.22■■■■□ 3.23
NCK2O43639 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC35.22■■■■□ 3.23
NCK2O43639 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.13■■■■□ 3.21
NCK2O43639 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.09■■■■□ 3.21
NCK2O43639 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.01■■■■□ 3.2
NCK2O43639 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.99■■■■□ 3.19
NCK2O43639 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
NCK2O43639 AL356512.1-201ENST00000607453 1739 ntBASIC34.75■■■■□ 3.15
NCK2O43639 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.7■■■■□ 3.15
NCK2O43639 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.63■■■■□ 3.13
NCK2O43639 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.59■■■■□ 3.13
NCK2O43639 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
NCK2O43639 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
NCK2O43639 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.46■■■■□ 3.11
NCK2O43639 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
NCK2O43639 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.19■■■■□ 3.06
NCK2O43639 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.11■■■■□ 3.05
NCK2O43639 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.1■■■■□ 3.05
NCK2O43639 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34■■■■□ 3.03
NCK2O43639 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
NCK2O43639 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
NCK2O43639 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.95■■■■□ 3.03
NCK2O43639 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.93■■■■□ 3.02
NCK2O43639 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.88■■■■□ 3.01
NCK2O43639 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
NCK2O43639 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.84■■■■□ 3.01
NCK2O43639 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
NCK2O43639 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.74■■■□□ 2.99
NCK2O43639 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
NCK2O43639 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.65■■■□□ 2.98
NCK2O43639 INO80B-203ENST00000409917 796 ntTSL 2 BASIC33.62■■■□□ 2.97
NCK2O43639 AC006077.2-201ENST00000623591 457 ntBASIC33.6■■■□□ 2.97
NCK2O43639 ZNRF2P1-201ENST00000441407 443 ntBASIC33.59■■■□□ 2.97
NCK2O43639 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.5■■■□□ 2.95
NCK2O43639 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.38■■■□□ 2.93
NCK2O43639 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
NCK2O43639 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.27■■■□□ 2.92
NCK2O43639 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
NCK2O43639 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
NCK2O43639 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
NCK2O43639 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
NCK2O43639 AC015813.7-201ENST00000623294 581 ntBASIC33.15■■■□□ 2.9
NCK2O43639 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
NCK2O43639 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
NCK2O43639 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.12■■■□□ 2.89
NCK2O43639 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
NCK2O43639 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.05■■■□□ 2.88
NCK2O43639 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
NCK2O43639 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
NCK2O43639 AP002365.1-201ENST00000603448 772 ntBASIC32.7■■■□□ 2.83
NCK2O43639 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
NCK2O43639 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.6■■■□□ 2.81
NCK2O43639 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
NCK2O43639 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.53■■■□□ 2.8
NCK2O43639 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
NCK2O43639 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.52■■■□□ 2.8
NCK2O43639 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.44■■■□□ 2.78
NCK2O43639 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
NCK2O43639 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.44■■■□□ 2.78
NCK2O43639 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
NCK2O43639 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
NCK2O43639 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.38■■■□□ 2.77
NCK2O43639 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.36■■■□□ 2.77
NCK2O43639 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
NCK2O43639 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
NCK2O43639 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
NCK2O43639 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.3■■■□□ 2.76
NCK2O43639 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.3■■■□□ 2.76
NCK2O43639 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
NCK2O43639 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.25■■■□□ 2.75
NCK2O43639 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.23■■■□□ 2.75
NCK2O43639 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
NCK2O43639 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.2■■■□□ 2.75
NCK2O43639 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.2■■■□□ 2.74
NCK2O43639 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.19■■■□□ 2.74
NCK2O43639 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
NCK2O43639 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
NCK2O43639 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.09■■■□□ 2.73
NCK2O43639 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
NCK2O43639 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.02■■■□□ 2.72
NCK2O43639 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
NCK2O43639 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32■■■□□ 2.71
NCK2O43639 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
NCK2O43639 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NCK2O43639 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
NCK2O43639 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.87■■■□□ 2.69
NCK2O43639 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
NCK2O43639 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NCK2O43639 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
NCK2O43639 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NCK2O43639 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
NCK2O43639 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
NCK2O43639 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
NCK2O43639 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms