Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
ABCD4O14678 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCD4O14678 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.98■■■□□ 2.23
ABCD4O14678 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
ABCD4O14678 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
ABCD4O14678 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
ABCD4O14678 AL356512.1-201ENST00000607453 1739 ntBASIC28.72■■■□□ 2.19
ABCD4O14678 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
ABCD4O14678 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
ABCD4O14678 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.07
ABCD4O14678 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28■■■□□ 2.07
ABCD4O14678 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
ABCD4O14678 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.84■■■□□ 2.05
ABCD4O14678 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.76■■■□□ 2.03
ABCD4O14678 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.75■■■□□ 2.03
ABCD4O14678 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.71■■■□□ 2.03
ABCD4O14678 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.69■■■□□ 2.02
ABCD4O14678 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.61■■■□□ 2.01
ABCD4O14678 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
ABCD4O14678 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.52■■■□□ 2
ABCD4O14678 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
ABCD4O14678 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ABCD4O14678 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
ABCD4O14678 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
ABCD4O14678 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ABCD4O14678 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.18■■□□□ 1.94
ABCD4O14678 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ABCD4O14678 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ABCD4O14678 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ABCD4O14678 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ABCD4O14678 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ABCD4O14678 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ABCD4O14678 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.88■■□□□ 1.89
ABCD4O14678 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ABCD4O14678 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ABCD4O14678 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.73■■□□□ 1.87
ABCD4O14678 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
ABCD4O14678 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
ABCD4O14678 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.64■■□□□ 1.85
ABCD4O14678 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ABCD4O14678 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
ABCD4O14678 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.56■■□□□ 1.84
ABCD4O14678 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
ABCD4O14678 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ABCD4O14678 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ABCD4O14678 AC015813.7-201ENST00000623294 581 ntBASIC26.37■■□□□ 1.81
ABCD4O14678 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
ABCD4O14678 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ABCD4O14678 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
ABCD4O14678 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC26.31■■□□□ 1.8
ABCD4O14678 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC26.3■■□□□ 1.8
ABCD4O14678 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
ABCD4O14678 AC006077.2-201ENST00000623591 457 ntBASIC26.23■■□□□ 1.79
ABCD4O14678 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.21■■□□□ 1.79
ABCD4O14678 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.2■■□□□ 1.79
ABCD4O14678 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ABCD4O14678 ZNRF2P1-201ENST00000441407 443 ntBASIC26.15■■□□□ 1.78
ABCD4O14678 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
ABCD4O14678 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
ABCD4O14678 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
ABCD4O14678 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCD4O14678 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC26.04■■□□□ 1.76
ABCD4O14678 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26■■□□□ 1.75
ABCD4O14678 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.99■■□□□ 1.75
ABCD4O14678 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ABCD4O14678 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ABCD4O14678 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
ABCD4O14678 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
ABCD4O14678 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
ABCD4O14678 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
ABCD4O14678 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ABCD4O14678 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ABCD4O14678 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.77■■□□□ 1.72
ABCD4O14678 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ABCD4O14678 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ABCD4O14678 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
ABCD4O14678 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ABCD4O14678 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ABCD4O14678 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ABCD4O14678 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ABCD4O14678 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.56■■□□□ 1.68
ABCD4O14678 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ABCD4O14678 AP002365.1-201ENST00000603448 772 ntBASIC25.53■■□□□ 1.68
ABCD4O14678 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ABCD4O14678 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ABCD4O14678 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
ABCD4O14678 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ABCD4O14678 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.41■■□□□ 1.66
ABCD4O14678 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.41■■□□□ 1.66
ABCD4O14678 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.39■■□□□ 1.66
ABCD4O14678 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC25.39■■□□□ 1.66
ABCD4O14678 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
ABCD4O14678 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.38■■□□□ 1.65
ABCD4O14678 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ABCD4O14678 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ABCD4O14678 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.35■■□□□ 1.65
ABCD4O14678 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ABCD4O14678 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
ABCD4O14678 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.32■■□□□ 1.64
ABCD4O14678 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 8.5 ms