Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRBV6-4A0A1B0GX49 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TRBV6-4A0A1B0GX49 AL356512.1-201ENST00000607453 1739 ntBASIC23.37■■□□□ 1.33
TRBV6-4A0A1B0GX49 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
TRBV6-4A0A1B0GX49 HES6-203ENST00000409160 1600 ntTSL 2 BASIC23.27■■□□□ 1.32
TRBV6-4A0A1B0GX49 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC23.15■■□□□ 1.3
TRBV6-4A0A1B0GX49 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TRBV6-4A0A1B0GX49 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC22.99■■□□□ 1.27
TRBV6-4A0A1B0GX49 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TRBV6-4A0A1B0GX49 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC22.8■■□□□ 1.24
TRBV6-4A0A1B0GX49 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRBV6-4A0A1B0GX49 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TRBV6-4A0A1B0GX49 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC22.57■■□□□ 1.2
TRBV6-4A0A1B0GX49 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TRBV6-4A0A1B0GX49 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRBV6-4A0A1B0GX49 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
TRBV6-4A0A1B0GX49 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRBV6-4A0A1B0GX49 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC22.15■■□□□ 1.14
TRBV6-4A0A1B0GX49 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.14
TRBV6-4A0A1B0GX49 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
TRBV6-4A0A1B0GX49 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TRBV6-4A0A1B0GX49 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
TRBV6-4A0A1B0GX49 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TRBV6-4A0A1B0GX49 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC21.91■■□□□ 1.1
TRBV6-4A0A1B0GX49 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRBV6-4A0A1B0GX49 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
TRBV6-4A0A1B0GX49 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRBV6-4A0A1B0GX49 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TRBV6-4A0A1B0GX49 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRBV6-4A0A1B0GX49 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC21.72■■□□□ 1.07
TRBV6-4A0A1B0GX49 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRBV6-4A0A1B0GX49 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV6-4A0A1B0GX49 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRBV6-4A0A1B0GX49 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRBV6-4A0A1B0GX49 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
TRBV6-4A0A1B0GX49 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC21.54■■□□□ 1.04
TRBV6-4A0A1B0GX49 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC21.53■■□□□ 1.04
TRBV6-4A0A1B0GX49 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV6-4A0A1B0GX49 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV6-4A0A1B0GX49 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TRBV6-4A0A1B0GX49 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRBV6-4A0A1B0GX49 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC21.27■■□□□ 1
TRBV6-4A0A1B0GX49 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.23■□□□□ 0.99
TRBV6-4A0A1B0GX49 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRBV6-4A0A1B0GX49 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV6-4A0A1B0GX49 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRBV6-4A0A1B0GX49 ILK-212ENST00000532063 1617 ntTSL 2 BASIC21.16■□□□□ 0.98
TRBV6-4A0A1B0GX49 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV6-4A0A1B0GX49 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV6-4A0A1B0GX49 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.1■□□□□ 0.97
TRBV6-4A0A1B0GX49 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC21.1■□□□□ 0.97
TRBV6-4A0A1B0GX49 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV6-4A0A1B0GX49 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRBV6-4A0A1B0GX49 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV6-4A0A1B0GX49 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV6-4A0A1B0GX49 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV6-4A0A1B0GX49 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV6-4A0A1B0GX49 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV6-4A0A1B0GX49 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV6-4A0A1B0GX49 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC20.96■□□□□ 0.95
TRBV6-4A0A1B0GX49 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV6-4A0A1B0GX49 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC20.89■□□□□ 0.93
TRBV6-4A0A1B0GX49 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV6-4A0A1B0GX49 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.8■□□□□ 0.92
TRBV6-4A0A1B0GX49 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRBV6-4A0A1B0GX49 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV6-4A0A1B0GX49 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRBV6-4A0A1B0GX49 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV6-4A0A1B0GX49 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV6-4A0A1B0GX49 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRBV6-4A0A1B0GX49 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV6-4A0A1B0GX49 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRBV6-4A0A1B0GX49 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV6-4A0A1B0GX49 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRBV6-4A0A1B0GX49 AC015813.7-201ENST00000623294 581 ntBASIC20.67■□□□□ 0.9
TRBV6-4A0A1B0GX49 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV6-4A0A1B0GX49 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV6-4A0A1B0GX49 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV6-4A0A1B0GX49 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV6-4A0A1B0GX49 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
TRBV6-4A0A1B0GX49 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC20.58■□□□□ 0.88
TRBV6-4A0A1B0GX49 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV6-4A0A1B0GX49 AC145285.7-201ENST00000614819 1539 ntBASIC20.55■□□□□ 0.88
TRBV6-4A0A1B0GX49 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV6-4A0A1B0GX49 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV6-4A0A1B0GX49 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV6-4A0A1B0GX49 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC20.5■□□□□ 0.87
TRBV6-4A0A1B0GX49 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.46■□□□□ 0.87
TRBV6-4A0A1B0GX49 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
TRBV6-4A0A1B0GX49 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV6-4A0A1B0GX49 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV6-4A0A1B0GX49 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.39■□□□□ 0.86
TRBV6-4A0A1B0GX49 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV6-4A0A1B0GX49 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TRBV6-4A0A1B0GX49 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRBV6-4A0A1B0GX49 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.32■□□□□ 0.84
TRBV6-4A0A1B0GX49 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRBV6-4A0A1B0GX49 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRBV6-4A0A1B0GX49 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV6-4A0A1B0GX49 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms