Protein–RNA interactions for Protein: A0A183

LCE6A, Late cornified envelope protein 6A, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE6AA0A183 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC24.28■■□□□ 1.48
LCE6AA0A183 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
LCE6AA0A183 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
LCE6AA0A183 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
LCE6AA0A183 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
LCE6AA0A183 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LCE6AA0A183 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LCE6AA0A183 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC23.17■■□□□ 1.3
LCE6AA0A183 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
LCE6AA0A183 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LCE6AA0A183 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LCE6AA0A183 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC22.8■■□□□ 1.24
LCE6AA0A183 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
LCE6AA0A183 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC22.69■■□□□ 1.22
LCE6AA0A183 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
LCE6AA0A183 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
LCE6AA0A183 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LCE6AA0A183 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
LCE6AA0A183 AL356512.1-201ENST00000607453 1739 ntBASIC22.46■■□□□ 1.19
LCE6AA0A183 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC22.46■■□□□ 1.19
LCE6AA0A183 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LCE6AA0A183 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LCE6AA0A183 ZNRF2P1-201ENST00000441407 443 ntBASIC22.38■■□□□ 1.17
LCE6AA0A183 AC006077.2-201ENST00000623591 457 ntBASIC22.31■■□□□ 1.16
LCE6AA0A183 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
LCE6AA0A183 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LCE6AA0A183 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
LCE6AA0A183 INO80B-203ENST00000409917 796 ntTSL 2 BASIC22.2■■□□□ 1.14
LCE6AA0A183 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
LCE6AA0A183 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC22.17■■□□□ 1.14
LCE6AA0A183 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LCE6AA0A183 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC22■■□□□ 1.11
LCE6AA0A183 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
LCE6AA0A183 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LCE6AA0A183 AP002365.1-201ENST00000603448 772 ntBASIC21.8■■□□□ 1.08
LCE6AA0A183 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LCE6AA0A183 AC015813.7-201ENST00000623294 581 ntBASIC21.79■■□□□ 1.08
LCE6AA0A183 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.65■■□□□ 1.06
LCE6AA0A183 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LCE6AA0A183 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LCE6AA0A183 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
LCE6AA0A183 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
LCE6AA0A183 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
LCE6AA0A183 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.49■■□□□ 1.03
LCE6AA0A183 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
LCE6AA0A183 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
LCE6AA0A183 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LCE6AA0A183 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.41■■□□□ 1.02
LCE6AA0A183 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.41■■□□□ 1.02
LCE6AA0A183 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
LCE6AA0A183 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
LCE6AA0A183 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.3■■□□□ 1
LCE6AA0A183 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LCE6AA0A183 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.27■■□□□ 1
LCE6AA0A183 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LCE6AA0A183 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LCE6AA0A183 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LCE6AA0A183 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC21.22■□□□□ 0.99
LCE6AA0A183 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LCE6AA0A183 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC21.15■□□□□ 0.98
LCE6AA0A183 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC21.14■□□□□ 0.97
LCE6AA0A183 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.13■□□□□ 0.97
LCE6AA0A183 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LCE6AA0A183 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.11■□□□□ 0.97
LCE6AA0A183 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.11■□□□□ 0.97
LCE6AA0A183 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LCE6AA0A183 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LCE6AA0A183 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LCE6AA0A183 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.06■□□□□ 0.96
LCE6AA0A183 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LCE6AA0A183 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.04■□□□□ 0.96
LCE6AA0A183 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.02■□□□□ 0.96
LCE6AA0A183 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
LCE6AA0A183 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.01■□□□□ 0.95
LCE6AA0A183 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LCE6AA0A183 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21■□□□□ 0.95
LCE6AA0A183 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LCE6AA0A183 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCE6AA0A183 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LCE6AA0A183 DYNLL1-208ENST00000550178 581 ntBASIC20.96■□□□□ 0.95
LCE6AA0A183 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC20.95■□□□□ 0.94
LCE6AA0A183 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.95■□□□□ 0.94
LCE6AA0A183 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LCE6AA0A183 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.94■□□□□ 0.94
LCE6AA0A183 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC20.92■□□□□ 0.94
LCE6AA0A183 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LCE6AA0A183 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LCE6AA0A183 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LCE6AA0A183 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LCE6AA0A183 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.85■□□□□ 0.93
LCE6AA0A183 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LCE6AA0A183 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.84■□□□□ 0.93
LCE6AA0A183 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.82■□□□□ 0.92
LCE6AA0A183 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.82■□□□□ 0.92
LCE6AA0A183 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.79■□□□□ 0.92
LCE6AA0A183 RARRES2P7-201ENST00000567349 469 ntBASIC20.79■□□□□ 0.92
LCE6AA0A183 RPS2P35-201ENST00000443417 897 ntBASIC20.78■□□□□ 0.92
LCE6AA0A183 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LCE6AA0A183 AL031258.1-201ENST00000623562 325 ntBASIC20.77■□□□□ 0.92
LCE6AA0A183 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms