Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
TRBV11-1A0A0K0K1C0 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRBV11-1A0A0K0K1C0 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
TRBV11-1A0A0K0K1C0 AL356512.1-201ENST00000607453 1739 ntBASIC30.88■■■□□ 2.53
TRBV11-1A0A0K0K1C0 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TRBV11-1A0A0K0K1C0 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TRBV11-1A0A0K0K1C0 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.82■■■□□ 2.52
TRBV11-1A0A0K0K1C0 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
TRBV11-1A0A0K0K1C0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.24■■■□□ 2.43
TRBV11-1A0A0K0K1C0 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.09■■■□□ 2.41
TRBV11-1A0A0K0K1C0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.99■■■□□ 2.39
TRBV11-1A0A0K0K1C0 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
TRBV11-1A0A0K0K1C0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.78■■■□□ 2.36
TRBV11-1A0A0K0K1C0 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.65■■■□□ 2.34
TRBV11-1A0A0K0K1C0 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
TRBV11-1A0A0K0K1C0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.55■■■□□ 2.32
TRBV11-1A0A0K0K1C0 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
TRBV11-1A0A0K0K1C0 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.53■■■□□ 2.32
TRBV11-1A0A0K0K1C0 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.46■■■□□ 2.31
TRBV11-1A0A0K0K1C0 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
TRBV11-1A0A0K0K1C0 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
TRBV11-1A0A0K0K1C0 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
TRBV11-1A0A0K0K1C0 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
TRBV11-1A0A0K0K1C0 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
TRBV11-1A0A0K0K1C0 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
TRBV11-1A0A0K0K1C0 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TRBV11-1A0A0K0K1C0 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
TRBV11-1A0A0K0K1C0 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
TRBV11-1A0A0K0K1C0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
TRBV11-1A0A0K0K1C0 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
TRBV11-1A0A0K0K1C0 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TRBV11-1A0A0K0K1C0 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.6■■■□□ 2.17
TRBV11-1A0A0K0K1C0 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.47■■■□□ 2.15
TRBV11-1A0A0K0K1C0 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.47■■■□□ 2.15
TRBV11-1A0A0K0K1C0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.46■■■□□ 2.15
TRBV11-1A0A0K0K1C0 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
TRBV11-1A0A0K0K1C0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TRBV11-1A0A0K0K1C0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.38■■■□□ 2.13
TRBV11-1A0A0K0K1C0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
TRBV11-1A0A0K0K1C0 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.2■■■□□ 2.11
TRBV11-1A0A0K0K1C0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
TRBV11-1A0A0K0K1C0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TRBV11-1A0A0K0K1C0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
TRBV11-1A0A0K0K1C0 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRBV11-1A0A0K0K1C0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
TRBV11-1A0A0K0K1C0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TRBV11-1A0A0K0K1C0 AC015813.7-201ENST00000623294 581 ntBASIC28.1■■■□□ 2.09
TRBV11-1A0A0K0K1C0 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
TRBV11-1A0A0K0K1C0 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.07■■■□□ 2.08
TRBV11-1A0A0K0K1C0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.97■■■□□ 2.07
TRBV11-1A0A0K0K1C0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
TRBV11-1A0A0K0K1C0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.94■■■□□ 2.06
TRBV11-1A0A0K0K1C0 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
TRBV11-1A0A0K0K1C0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
TRBV11-1A0A0K0K1C0 AC006077.2-201ENST00000623591 457 ntBASIC27.8■■■□□ 2.04
TRBV11-1A0A0K0K1C0 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.8■■■□□ 2.04
TRBV11-1A0A0K0K1C0 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.76■■■□□ 2.03
TRBV11-1A0A0K0K1C0 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
TRBV11-1A0A0K0K1C0 ZNRF2P1-201ENST00000441407 443 ntBASIC27.71■■■□□ 2.03
TRBV11-1A0A0K0K1C0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
TRBV11-1A0A0K0K1C0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
TRBV11-1A0A0K0K1C0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
TRBV11-1A0A0K0K1C0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
TRBV11-1A0A0K0K1C0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.57■■■□□ 2
TRBV11-1A0A0K0K1C0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.56■■■□□ 2
TRBV11-1A0A0K0K1C0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
TRBV11-1A0A0K0K1C0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.52■■■□□ 2
TRBV11-1A0A0K0K1C0 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
TRBV11-1A0A0K0K1C0 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.44■■□□□ 1.98
TRBV11-1A0A0K0K1C0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TRBV11-1A0A0K0K1C0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRBV11-1A0A0K0K1C0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRBV11-1A0A0K0K1C0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TRBV11-1A0A0K0K1C0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
TRBV11-1A0A0K0K1C0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.21■■□□□ 1.95
TRBV11-1A0A0K0K1C0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TRBV11-1A0A0K0K1C0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
TRBV11-1A0A0K0K1C0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TRBV11-1A0A0K0K1C0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TRBV11-1A0A0K0K1C0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRBV11-1A0A0K0K1C0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRBV11-1A0A0K0K1C0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
TRBV11-1A0A0K0K1C0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC27.11■■□□□ 1.93
TRBV11-1A0A0K0K1C0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
TRBV11-1A0A0K0K1C0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TRBV11-1A0A0K0K1C0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TRBV11-1A0A0K0K1C0 AP002365.1-201ENST00000603448 772 ntBASIC27.06■■□□□ 1.92
TRBV11-1A0A0K0K1C0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.04■■□□□ 1.92
TRBV11-1A0A0K0K1C0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.03■■□□□ 1.92
TRBV11-1A0A0K0K1C0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TRBV11-1A0A0K0K1C0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRBV11-1A0A0K0K1C0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
TRBV11-1A0A0K0K1C0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.94■■□□□ 1.9
TRBV11-1A0A0K0K1C0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
TRBV11-1A0A0K0K1C0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.93■■□□□ 1.9
TRBV11-1A0A0K0K1C0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.91■■□□□ 1.9
TRBV11-1A0A0K0K1C0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
TRBV11-1A0A0K0K1C0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.89■■□□□ 1.9
TRBV11-1A0A0K0K1C0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
TRBV11-1A0A0K0K1C0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms