Protein–RNA interactions for Protein: Q9UK45

LSM7, U6 snRNA-associated Sm-like protein LSm7, humanhuman

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7Q9UK45 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LSM7Q9UK45 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
LSM7Q9UK45 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.39■■□□□ 1.82
LSM7Q9UK45 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.82
LSM7Q9UK45 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.39■■□□□ 1.82
LSM7Q9UK45 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
LSM7Q9UK45 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
LSM7Q9UK45 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
LSM7Q9UK45 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.38■■□□□ 1.81
LSM7Q9UK45 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
LSM7Q9UK45 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
LSM7Q9UK45 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
LSM7Q9UK45 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.37■■□□□ 1.81
LSM7Q9UK45 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.37■■□□□ 1.81
LSM7Q9UK45 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.37■■□□□ 1.81
LSM7Q9UK45 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.37■■□□□ 1.81
LSM7Q9UK45 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.36■■□□□ 1.81
LSM7Q9UK45 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
LSM7Q9UK45 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LSM7Q9UK45 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.35■■□□□ 1.81
LSM7Q9UK45 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.35■■□□□ 1.81
LSM7Q9UK45 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
LSM7Q9UK45 AC148477.6-201ENST00000623746 465 ntBASIC26.34■■□□□ 1.81
LSM7Q9UK45 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LSM7Q9UK45 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LSM7Q9UK45 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LSM7Q9UK45 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.33■■□□□ 1.81
LSM7Q9UK45 AL139393.2-201ENST00000608721 2025 ntBASIC26.32■■□□□ 1.8
LSM7Q9UK45 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
LSM7Q9UK45 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LSM7Q9UK45 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LSM7Q9UK45 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
LSM7Q9UK45 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.32■■□□□ 1.8
LSM7Q9UK45 AC100797.4-201ENST00000631653 1827 ntBASIC26.32■■□□□ 1.8
LSM7Q9UK45 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
LSM7Q9UK45 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.32■■□□□ 1.8
LSM7Q9UK45 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.31■■□□□ 1.8
LSM7Q9UK45 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LSM7Q9UK45 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LSM7Q9UK45 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LSM7Q9UK45 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LSM7Q9UK45 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LSM7Q9UK45 ABCB10P1-201ENST00000614297 2181 ntBASIC26.3■■□□□ 1.8
LSM7Q9UK45 GPX1-201ENST00000419349 1106 ntBASIC26.3■■□□□ 1.8
LSM7Q9UK45 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.3■■□□□ 1.8
LSM7Q9UK45 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.3■■□□□ 1.8
LSM7Q9UK45 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.3■■□□□ 1.8
LSM7Q9UK45 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
LSM7Q9UK45 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
LSM7Q9UK45 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LSM7Q9UK45 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.29■■□□□ 1.8
LSM7Q9UK45 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
LSM7Q9UK45 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
LSM7Q9UK45 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.29■■□□□ 1.8
LSM7Q9UK45 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.28■■□□□ 1.8
LSM7Q9UK45 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LSM7Q9UK45 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.28■■□□□ 1.8
LSM7Q9UK45 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
LSM7Q9UK45 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.28■■□□□ 1.8
LSM7Q9UK45 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LSM7Q9UK45 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
LSM7Q9UK45 MIR219A2-201ENST00000608502 1504 ntBASIC26.26■■□□□ 1.79
LSM7Q9UK45 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
LSM7Q9UK45 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LSM7Q9UK45 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LSM7Q9UK45 AC022413.1-201ENST00000624602 984 ntBASIC26.25■■□□□ 1.79
LSM7Q9UK45 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
LSM7Q9UK45 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
LSM7Q9UK45 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.24■■□□□ 1.79
LSM7Q9UK45 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
LSM7Q9UK45 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.23■■□□□ 1.79
LSM7Q9UK45 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.23■■□□□ 1.79
LSM7Q9UK45 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
LSM7Q9UK45 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.22■■□□□ 1.79
LSM7Q9UK45 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
LSM7Q9UK45 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
LSM7Q9UK45 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LSM7Q9UK45 ABCB10P3-201ENST00000561950 2166 ntBASIC26.21■■□□□ 1.79
LSM7Q9UK45 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
LSM7Q9UK45 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
LSM7Q9UK45 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
LSM7Q9UK45 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
LSM7Q9UK45 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
LSM7Q9UK45 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.2■■□□□ 1.78
LSM7Q9UK45 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LSM7Q9UK45 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LSM7Q9UK45 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
LSM7Q9UK45 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
LSM7Q9UK45 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.19■■□□□ 1.78
LSM7Q9UK45 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LSM7Q9UK45 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LSM7Q9UK45 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
LSM7Q9UK45 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LSM7Q9UK45 RARRES2P2-201ENST00000394842 485 ntBASIC26.18■■□□□ 1.78
LSM7Q9UK45 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.18■■□□□ 1.78
LSM7Q9UK45 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
LSM7Q9UK45 RNF126P1-201ENST00000567452 1320 ntBASIC26.17■■□□□ 1.78
LSM7Q9UK45 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LSM7Q9UK45 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.17■■□□□ 1.78
LSM7Q9UK45 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms