Protein–RNA interactions for Protein: Q9UK45

LSM7, U6 snRNA-associated Sm-like protein LSm7, humanhuman

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7Q9UK45 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.68■■■■□ 3.3
LSM7Q9UK45 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
LSM7Q9UK45 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.73■■■■□ 3.15
LSM7Q9UK45 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
LSM7Q9UK45 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.56■■■■□ 3.12
LSM7Q9UK45 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
LSM7Q9UK45 AL356512.1-201ENST00000607453 1739 ntBASIC34.45■■■■□ 3.11
LSM7Q9UK45 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.11■■■■□ 3.05
LSM7Q9UK45 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.66■■■□□ 2.98
LSM7Q9UK45 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.59■■■□□ 2.97
LSM7Q9UK45 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.38■■■□□ 2.93
LSM7Q9UK45 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.36■■■□□ 2.93
LSM7Q9UK45 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC33.32■■■□□ 2.92
LSM7Q9UK45 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.27■■■□□ 2.92
LSM7Q9UK45 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.18■■■□□ 2.9
LSM7Q9UK45 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.17■■■□□ 2.9
LSM7Q9UK45 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC33.15■■■□□ 2.9
LSM7Q9UK45 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
LSM7Q9UK45 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
LSM7Q9UK45 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.69■■■□□ 2.82
LSM7Q9UK45 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC32.65■■■□□ 2.82
LSM7Q9UK45 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
LSM7Q9UK45 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
LSM7Q9UK45 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
LSM7Q9UK45 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
LSM7Q9UK45 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
LSM7Q9UK45 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
LSM7Q9UK45 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
LSM7Q9UK45 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.19■■■□□ 2.74
LSM7Q9UK45 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
LSM7Q9UK45 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
LSM7Q9UK45 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.98■■■□□ 2.71
LSM7Q9UK45 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
LSM7Q9UK45 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.96■■■□□ 2.71
LSM7Q9UK45 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.82■■■□□ 2.69
LSM7Q9UK45 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
LSM7Q9UK45 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
LSM7Q9UK45 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
LSM7Q9UK45 AC015813.7-201ENST00000623294 581 ntBASIC31.58■■■□□ 2.65
LSM7Q9UK45 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
LSM7Q9UK45 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
LSM7Q9UK45 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
LSM7Q9UK45 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.51■■■□□ 2.63
LSM7Q9UK45 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.49■■■□□ 2.63
LSM7Q9UK45 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.47■■■□□ 2.63
LSM7Q9UK45 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC31.45■■■□□ 2.63
LSM7Q9UK45 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
LSM7Q9UK45 AC006077.2-201ENST00000623591 457 ntBASIC31.4■■■□□ 2.62
LSM7Q9UK45 ZNRF2P1-201ENST00000441407 443 ntBASIC31.3■■■□□ 2.6
LSM7Q9UK45 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.29■■■□□ 2.6
LSM7Q9UK45 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.22■■■□□ 2.59
LSM7Q9UK45 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
LSM7Q9UK45 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
LSM7Q9UK45 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.18■■■□□ 2.58
LSM7Q9UK45 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
LSM7Q9UK45 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
LSM7Q9UK45 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LSM7Q9UK45 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
LSM7Q9UK45 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
LSM7Q9UK45 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
LSM7Q9UK45 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
LSM7Q9UK45 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.88■■■□□ 2.53
LSM7Q9UK45 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
LSM7Q9UK45 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
LSM7Q9UK45 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
LSM7Q9UK45 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
LSM7Q9UK45 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
LSM7Q9UK45 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LSM7Q9UK45 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
LSM7Q9UK45 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LSM7Q9UK45 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.6■■■□□ 2.49
LSM7Q9UK45 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
LSM7Q9UK45 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.57■■■□□ 2.48
LSM7Q9UK45 AP002365.1-201ENST00000603448 772 ntBASIC30.55■■■□□ 2.48
LSM7Q9UK45 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LSM7Q9UK45 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.45■■■□□ 2.47
LSM7Q9UK45 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.42■■■□□ 2.46
LSM7Q9UK45 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.42■■■□□ 2.46
LSM7Q9UK45 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
LSM7Q9UK45 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LSM7Q9UK45 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LSM7Q9UK45 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
LSM7Q9UK45 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
LSM7Q9UK45 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
LSM7Q9UK45 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.34■■■□□ 2.45
LSM7Q9UK45 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.32■■■□□ 2.44
LSM7Q9UK45 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
LSM7Q9UK45 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.27■■■□□ 2.44
LSM7Q9UK45 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
LSM7Q9UK45 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
LSM7Q9UK45 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
LSM7Q9UK45 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.25■■■□□ 2.43
LSM7Q9UK45 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
LSM7Q9UK45 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
LSM7Q9UK45 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.2■■■□□ 2.42
LSM7Q9UK45 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.19■■■□□ 2.42
LSM7Q9UK45 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.18■■■□□ 2.42
LSM7Q9UK45 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.18■■■□□ 2.42
LSM7Q9UK45 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
LSM7Q9UK45 DYNLL1-208ENST00000550178 581 ntBASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms