Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV10A0A0B4J240 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV10A0A0B4J240 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV10A0A0B4J240 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV10A0A0B4J240 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRAV10A0A0B4J240 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV10A0A0B4J240 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
TRAV10A0A0B4J240 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV10A0A0B4J240 AP004833.2-201ENST00000532228 1454 ntBASIC17.97■□□□□ 0.47
TRAV10A0A0B4J240 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV10A0A0B4J240 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV10A0A0B4J240 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV10A0A0B4J240 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV10A0A0B4J240 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV10A0A0B4J240 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV10A0A0B4J240 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.96■□□□□ 0.47
TRAV10A0A0B4J240 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV10A0A0B4J240 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV10A0A0B4J240 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV10A0A0B4J240 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV10A0A0B4J240 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV10A0A0B4J240 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV10A0A0B4J240 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 AC148477.6-201ENST00000623746 465 ntBASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 AC022413.1-201ENST00000624602 984 ntBASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV10A0A0B4J240 RARRES2P2-201ENST00000394842 485 ntBASIC17.94■□□□□ 0.46
TRAV10A0A0B4J240 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV10A0A0B4J240 RNF126P1-201ENST00000567452 1320 ntBASIC17.94■□□□□ 0.46
TRAV10A0A0B4J240 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV10A0A0B4J240 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV10A0A0B4J240 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV10A0A0B4J240 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV10A0A0B4J240 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
TRAV10A0A0B4J240 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
TRAV10A0A0B4J240 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
TRAV10A0A0B4J240 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV10A0A0B4J240 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV10A0A0B4J240 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV10A0A0B4J240 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV10A0A0B4J240 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV10A0A0B4J240 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRAV10A0A0B4J240 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV10A0A0B4J240 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV10A0A0B4J240 MIR219A2-201ENST00000608502 1504 ntBASIC17.88■□□□□ 0.45
TRAV10A0A0B4J240 ABHD17AP5-201ENST00000580133 923 ntBASIC17.88■□□□□ 0.45
TRAV10A0A0B4J240 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV10A0A0B4J240 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.88■□□□□ 0.45
TRAV10A0A0B4J240 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV10A0A0B4J240 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV10A0A0B4J240 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV10A0A0B4J240 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TRAV10A0A0B4J240 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV10A0A0B4J240 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.86■□□□□ 0.45
TRAV10A0A0B4J240 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TRAV10A0A0B4J240 AC126177.7-201ENST00000547904 679 ntBASIC17.86■□□□□ 0.45
TRAV10A0A0B4J240 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV10A0A0B4J240 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV10A0A0B4J240 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV10A0A0B4J240 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV10A0A0B4J240 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV10A0A0B4J240 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV10A0A0B4J240 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV10A0A0B4J240 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV10A0A0B4J240 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV10A0A0B4J240 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV10A0A0B4J240 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV10A0A0B4J240 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV10A0A0B4J240 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV10A0A0B4J240 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV10A0A0B4J240 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV10A0A0B4J240 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV10A0A0B4J240 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TRAV10A0A0B4J240 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV10A0A0B4J240 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV10A0A0B4J240 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV10A0A0B4J240 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.82■□□□□ 0.44
TRAV10A0A0B4J240 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV10A0A0B4J240 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV10A0A0B4J240 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV10A0A0B4J240 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV10A0A0B4J240 AC060814.1-201ENST00000554326 538 ntBASIC17.81■□□□□ 0.44
TRAV10A0A0B4J240 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV10A0A0B4J240 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV10A0A0B4J240 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV10A0A0B4J240 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRAV10A0A0B4J240 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.8■□□□□ 0.44
TRAV10A0A0B4J240 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV10A0A0B4J240 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV10A0A0B4J240 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV10A0A0B4J240 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAV10A0A0B4J240 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRAV10A0A0B4J240 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms