Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.088e-10■■□□□ 11.5
EXOSC5Q9NQT4 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.128e-10■■□□□ 11.5
EXOSC5Q9NQT4 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.268e-10■■□□□ 11.5
EXOSC5Q9NQT4 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.288e-10■■□□□ 11.5
EXOSC5Q9NQT4 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.348e-10■■□□□ 11.5
EXOSC5Q9NQT4 SNORD97-201ENST00000459187 142 ntBASIC3.22□□□□□ -1.898e-10■■□□□ 11.5
EXOSC5Q9NQT4 EIF4G2-222ENST00000532120 223 ntTSL 31.79□□□□□ -2.128e-10■■□□□ 11.5
EXOSC5Q9NQT4 CTBP2-213ENST00000530930 425 ntTSL 59.3□□□□□ -0.921e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-205ENST00000440812 1190 ntTSL 516.36■□□□□ 0.211e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-204ENST00000419169 2483 ntAPPRIS ALT2 TSL 215.36■□□□□ 0.051e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-206ENST00000444547 580 ntTSL 415.08■□□□□ 01e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-203ENST00000367538 328 ntTSL 215.02■□□□□ -01e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-213ENST00000507691 760 ntTSL 513.88□□□□□ -0.191e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-210ENST00000502375 566 ntTSL 512.33□□□□□ -0.441e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.591e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.731e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-201ENST00000347615 5788 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.871e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-215ENST00000515829 5629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.941e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.191e-6■■□□□ 11.4
EXOSC5Q9NQT4 SMG7-216ENST00000638826 219 ntTSL 2 BASIC6.8□□□□□ -1.321e-6■■□□□ 11.4
EXOSC5Q9NQT4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.79■□□□□ 0.284e-6■■□□□ 11.4
EXOSC5Q9NQT4 BIRC2-210ENST00000533742 720 ntTSL 216.77■□□□□ 0.284e-6■■□□□ 11.4
EXOSC5Q9NQT4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.14e-6■■□□□ 11.4
EXOSC5Q9NQT4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.164e-6■■□□□ 11.4
EXOSC5Q9NQT4 BIRC2-207ENST00000531259 572 ntTSL 513.7□□□□□ -0.224e-6■■□□□ 11.4
EXOSC5Q9NQT4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.81□□□□□ -0.364e-6■■□□□ 11.4
EXOSC5Q9NQT4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.474e-6■■□□□ 11.4
EXOSC5Q9NQT4 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.684e-6■■□□□ 11.4
EXOSC5Q9NQT4 PDE3A-202ENST00000542675 685 ntTSL 39.61□□□□□ -0.874e-6■■□□□ 11.4
EXOSC5Q9NQT4 BIRC2-204ENST00000527910 4073 ntTSL 1 (best)9.48□□□□□ -0.894e-6■■□□□ 11.4
EXOSC5Q9NQT4 CKAP4-202ENST00000552828 831 ntTSL 39.46□□□□□ -0.94e-6■■□□□ 11.4
EXOSC5Q9NQT4 BIRC2-201ENST00000227758 3743 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.924e-6■■□□□ 11.4
EXOSC5Q9NQT4 BIRC2-205ENST00000528344 866 ntTSL 56.75□□□□□ -1.334e-6■■□□□ 11.4
EXOSC5Q9NQT4 CKAP4-203ENST00000553039 573 ntTSL 44.75□□□□□ -1.654e-6■■□□□ 11.4
EXOSC5Q9NQT4 COL27A1-208ENST00000494780 514 ntTSL 418.35■□□□□ 0.533e-6■□□□□ 11.3
EXOSC5Q9NQT4 MPP6-204ENST00000426450 552 ntTSL 43.74□□□□□ -1.813e-6■□□□□ 11.3
EXOSC5Q9NQT4 DGCR8-204ENST00000457069 770 ntTSL 315.31■□□□□ 0.048e-8■□□□□ 11.3
EXOSC5Q9NQT4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.961e-6■□□□□ 11.3
EXOSC5Q9NQT4 CTBP2-206ENST00000460976 603 ntTSL 520.41■□□□□ 0.861e-6■□□□□ 11.3
EXOSC5Q9NQT4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.321e-6■□□□□ 11.3
EXOSC5Q9NQT4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.221e-6■□□□□ 11.3
EXOSC5Q9NQT4 CTBP2-208ENST00000476817 705 ntTSL 316.21■□□□□ 0.191e-6■□□□□ 11.3
EXOSC5Q9NQT4 CTBP2-203ENST00000337195 6939 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.871e-6■□□□□ 11.3
EXOSC5Q9NQT4 CTBP2-212ENST00000530884 578 ntTSL 39□□□□□ -0.971e-6■□□□□ 11.3
EXOSC5Q9NQT4 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.691e-6■□□□□ 11.2
EXOSC5Q9NQT4 PCSK9-202ENST00000490692 3891 ntTSL 210.44□□□□□ -0.741e-6■□□□□ 11.2
EXOSC5Q9NQT4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.816e-9■□□□□ 11.2
EXOSC5Q9NQT4 RANBP1-210ENST00000435265 1879 ntTSL 216.53■□□□□ 0.246e-9■□□□□ 11.2
EXOSC5Q9NQT4 RANBP1-207ENST00000423859 832 ntTSL 314.46□□□□□ -0.096e-9■□□□□ 11.2
EXOSC5Q9NQT4 RANBP1-205ENST00000418705 932 ntTSL 313.11□□□□□ -0.316e-9■□□□□ 11.2
EXOSC5Q9NQT4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.09□□□□□ -0.476e-9■□□□□ 11.2
EXOSC5Q9NQT4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.486e-9■□□□□ 11.2
EXOSC5Q9NQT4 RANBP1-203ENST00000411892 584 ntTSL 211.89□□□□□ -0.516e-9■□□□□ 11.2
EXOSC5Q9NQT4 RANBP1-211ENST00000448394 688 ntTSL 211.65□□□□□ -0.546e-9■□□□□ 11.2
EXOSC5Q9NQT4 PHF21A-219ENST00000533757 466 ntTSL 55.69□□□□□ -1.53e-6■□□□□ 11.2
EXOSC5Q9NQT4 PHF21A-216ENST00000532010 546 ntTSL 45.54□□□□□ -1.523e-6■□□□□ 11.2
EXOSC5Q9NQT4 PHF21A-212ENST00000529782 561 ntTSL 44.25□□□□□ -1.733e-6■□□□□ 11.2
EXOSC5Q9NQT4 PHF21A-204ENST00000525438 577 ntTSL 43.73□□□□□ -1.813e-6■□□□□ 11.2
EXOSC5Q9NQT4 PHF21A-209ENST00000527782 490 ntTSL 42.95□□□□□ -1.943e-6■□□□□ 11.2
EXOSC5Q9NQT4 PHF21A-210ENST00000528893 457 ntTSL 31.96□□□□□ -2.13e-6■□□□□ 11.2
EXOSC5Q9NQT4 NUP214-216ENST00000526346 577 ntTSL 46.23□□□□□ -1.411e-6■□□□□ 11.1
EXOSC5Q9NQT4 NUP214-227ENST00000531929 593 ntTSL 41.93□□□□□ -2.11e-6■□□□□ 11.1
EXOSC5Q9NQT4 ERC1-224ENST00000592048 1275 ntTSL 520.95■□□□□ 0.943e-7■□□□□ 11.1
EXOSC5Q9NQT4 RNASET2-202ENST00000358165 2445 ntTSL 214.24□□□□□ -0.133e-7■□□□□ 11.1
EXOSC5Q9NQT4 RNASET2-209ENST00000499370 2164 ntTSL 29.67□□□□□ -0.863e-7■□□□□ 11.1
EXOSC5Q9NQT4 RNASET2-208ENST00000496851 881 ntTSL 58.52□□□□□ -1.053e-7■□□□□ 11.1
EXOSC5Q9NQT4 ARFGAP1-214ENST00000520485 1548 ntTSL 219■□□□□ 0.637e-6■□□□□ 11
EXOSC5Q9NQT4 PRRC2B-205ENST00000451855 1762 ntTSL 518.5■□□□□ 0.557e-6■□□□□ 11
EXOSC5Q9NQT4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.22■□□□□ 0.192e-7■□□□□ 11
EXOSC5Q9NQT4 ARFGAP1-209ENST00000518794 2727 ntTSL 1 (best)15.76■□□□□ 0.117e-6■□□□□ 11
EXOSC5Q9NQT4 ARFGAP1-205ENST00000468975 2640 ntTSL 215.01□□□□□ -0.017e-6■□□□□ 11
EXOSC5Q9NQT4 HSPG2-208ENST00000471322 1602 ntTSL 514.99□□□□□ -0.017e-6■□□□□ 11
EXOSC5Q9NQT4 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.057e-6■□□□□ 11
EXOSC5Q9NQT4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.087e-6■□□□□ 11
EXOSC5Q9NQT4 ARFGAP1-204ENST00000395285 2697 ntTSL 214.44□□□□□ -0.17e-6■□□□□ 11
EXOSC5Q9NQT4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.05□□□□□ -0.167e-6■□□□□ 11
EXOSC5Q9NQT4 ARFGAP1-207ENST00000518618 1244 ntTSL 214.03□□□□□ -0.167e-6■□□□□ 11
EXOSC5Q9NQT4 PTPRS-206ENST00000588552 5443 ntTSL 1 (best)13.97□□□□□ -0.177e-6■□□□□ 11
EXOSC5Q9NQT4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.27e-6■□□□□ 11
EXOSC5Q9NQT4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.297e-6■□□□□ 11
EXOSC5Q9NQT4 ARFGAP1-222ENST00000549076 913 ntTSL 213.13□□□□□ -0.317e-6■□□□□ 11
EXOSC5Q9NQT4 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.76□□□□□ -0.377e-6■□□□□ 11
EXOSC5Q9NQT4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.387e-6■□□□□ 11
EXOSC5Q9NQT4 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.397e-6■□□□□ 11
EXOSC5Q9NQT4 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC11.11□□□□□ -0.631e-12■□□□□ 11
EXOSC5Q9NQT4 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.637e-6■□□□□ 11
EXOSC5Q9NQT4 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC11.02□□□□□ -0.647e-6■□□□□ 11
EXOSC5Q9NQT4 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC11.02□□□□□ -0.647e-6■□□□□ 11
EXOSC5Q9NQT4 AC233280.19-201ENST00000633223 136 ntBASIC11.02□□□□□ -0.657e-6■□□□□ 11
EXOSC5Q9NQT4 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.657e-6■□□□□ 11
EXOSC5Q9NQT4 PTPRS-202ENST00000353284 4518 ntTSL 5 BASIC10.98□□□□□ -0.657e-6■□□□□ 11
EXOSC5Q9NQT4 COL18A1-206ENST00000459895 588 ntTSL 310.4□□□□□ -0.747e-6■□□□□ 11
EXOSC5Q9NQT4 AC124312.3-201ENST00000567527 1236 ntBASIC9.53□□□□□ -0.881e-12■□□□□ 11
EXOSC5Q9NQT4 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC9.36□□□□□ -0.911e-12■□□□□ 11
EXOSC5Q9NQT4 HSPG2-202ENST00000374676 411 ntTSL 39.31□□□□□ -0.927e-6■□□□□ 11
EXOSC5Q9NQT4 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC8.97□□□□□ -0.977e-6■□□□□ 11
EXOSC5Q9NQT4 GREB1-203ENST00000381483 2347 ntTSL 1 (best) BASIC8.93□□□□□ -0.987e-6■□□□□ 11
EXOSC5Q9NQT4 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC8.78□□□□□ -17e-6■□□□□ 11
EXOSC5Q9NQT4 RAPGEF5-208ENST00000471484 589 ntTSL 48.56□□□□□ -1.042e-7■□□□□ 11
EXOSC5Q9NQT4 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.167e-6■□□□□ 11
Retrieved 100 of 8,799 protein–RNA pairs in 367.1 ms