RNA–Protein interactions for RNA: ENST00000395285.3

ARFGAP1-204, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-204ENST00000395285 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
ARFGAP1-204ENST00000395285 CCDC180Q9P1Z9 1646 aa29.93■■■□□ 2.38
ARFGAP1-204ENST00000395285 ZCCHC6Q5VYS8 1495 aaKnown RBP29.25■■■□□ 2.27
ARFGAP1-204ENST00000395285 SHROOM4Q9ULL8 1493 aa29.05■■■□□ 2.24
ARFGAP1-204ENST00000395285 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
ARFGAP1-204ENST00000395285 DCAF8L2P0C7V8 631 aa28.64■■■□□ 2.17
ARFGAP1-204ENST00000395285 SUPT5HO00267 1087 aaKnown RBP28.54■■■□□ 2.16
ARFGAP1-204ENST00000395285 MYO15BQ96JP2 1530 aa28.12■■■□□ 2.09
ARFGAP1-204ENST00000395285 PELP1Q8IZL8 1130 aaKnown RBP27.97■■■□□ 2.07
ARFGAP1-204ENST00000395285 ABCC9O60706 1549 aa27.96■■■□□ 2.07
ARFGAP1-204ENST00000395285 NACADO15069 1562 aa27.8■■■□□ 2.04
ARFGAP1-204ENST00000395285 SCRIBQ14160 1630 aa27.68■■■□□ 2.02
ARFGAP1-204ENST00000395285 CHIC1Q5VXU3 224 aa27.64■■■□□ 2.02
ARFGAP1-204ENST00000395285 RB1CC1Q8TDY2 1594 aa27.45■■□□□ 1.98
ARFGAP1-204ENST00000395285 HRCP23327 699 aa27.43■■□□□ 1.98
ARFGAP1-204ENST00000395285 MYT1Q01538 1121 aa27.19■■□□□ 1.94
ARFGAP1-204ENST00000395285 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
ARFGAP1-204ENST00000395285 PCGF6Q9BYE7 350 aa27.06■■□□□ 1.92
ARFGAP1-204ENST00000395285 LOC105371045A0A1W2PR82 267 aa27■■□□□ 1.91
ARFGAP1-204ENST00000395285 CECR2Q9BXF3 1484 aa26.96■■□□□ 1.91
ARFGAP1-204ENST00000395285 PPARGC1BQ86YN6 1023 aaKnown RBP26.89■■□□□ 1.89
ARFGAP1-204ENST00000395285 UNC13AQ9UPW8 1703 aa26.87■■□□□ 1.89
ARFGAP1-204ENST00000395285 MROH2BQ7Z745 1585 aa26.85■■□□□ 1.89
ARFGAP1-204ENST00000395285 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
ARFGAP1-204ENST00000395285 WIZO95785 1651 aa26.64■■□□□ 1.85
ARFGAP1-204ENST00000395285 BICRAQ9NZM4 1560 aa26.62■■□□□ 1.85
ARFGAP1-204ENST00000395285 SCAF1Q9H7N4 1312 aaKnown RBP26.55■■□□□ 1.84
ARFGAP1-204ENST00000395285 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
ARFGAP1-204ENST00000395285 PABPN1Q86U42 306 aaKnown RBP eCLIP26.53■■□□□ 1.842e-7■■■□□ 17.3
ARFGAP1-204ENST00000395285 TRIM41Q8WV44 630 aa26.45■■□□□ 1.83
ARFGAP1-204ENST00000395285 FAM9AQ8IZU1 332 aaPredicted RBP26.42■■□□□ 1.82
ARFGAP1-204ENST00000395285 TOP2AP11388 1531 aaKnown RBP26.36■■□□□ 1.81
ARFGAP1-204ENST00000395285 EHMT2Q96KQ7 1210 aa26.36■■□□□ 1.81
ARFGAP1-204ENST00000395285 TRIM26Q12899 539 aaPredicted RBP26.35■■□□□ 1.81
ARFGAP1-204ENST00000395285 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
ARFGAP1-204ENST00000395285 CCDC88BA6NC98 1476 aa26.15■■□□□ 1.78
ARFGAP1-204ENST00000395285 SMARCA2P51531 1590 aa26.14■■□□□ 1.77
ARFGAP1-204ENST00000395285 EIF4G1Q04637 1599 aaKnown RBP26.1■■□□□ 1.77
ARFGAP1-204ENST00000395285 ATAD2BQ9ULI0 1458 aa26.02■■□□□ 1.76
ARFGAP1-204ENST00000395285 BAZ1BQ9UIG0 1483 aaKnown RBP25.9■■□□□ 1.74
ARFGAP1-204ENST00000395285 TTBK1Q5TCY1 1321 aaPredicted RBP25.78■■□□□ 1.72
ARFGAP1-204ENST00000395285 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
ARFGAP1-204ENST00000395285 ZEB1P37275 1124 aaPredicted RBP25.72■■□□□ 1.71
ARFGAP1-204ENST00000395285 NCAPD3P42695 1498 aa25.7■■□□□ 1.7
ARFGAP1-204ENST00000395285 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
ARFGAP1-204ENST00000395285 ACIN1Q9UKV3 1341 aaKnown RBP25.57■■□□□ 1.68
ARFGAP1-204ENST00000395285 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
ARFGAP1-204ENST00000395285 NEUROD1Q13562 356 aa25.47■■□□□ 1.67
ARFGAP1-204ENST00000395285 GTF3C3Q9Y5Q9 886 aa25.46■■□□□ 1.67
ARFGAP1-204ENST00000395285 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.45■■□□□ 1.66
ARFGAP1-204ENST00000395285 EEA1Q15075 1411 aa25.44■■□□□ 1.66
ARFGAP1-204ENST00000395285 SOGA1O94964 1423 aa25.43■■□□□ 1.66
ARFGAP1-204ENST00000395285 DNAJC5BQ9UF47 199 aa25.39■■□□□ 1.66
ARFGAP1-204ENST00000395285 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
ARFGAP1-204ENST00000395285 BCL11AQ9H165 835 aa25.36■■□□□ 1.65
ARFGAP1-204ENST00000395285 CCER1Q8TC90 406 aaPredicted RBP25.33■■□□□ 1.65
ARFGAP1-204ENST00000395285 CSRNP3Q8WYN3 585 aa25.31■■□□□ 1.64
ARFGAP1-204ENST00000395285 RUSC2Q8N2Y8 1516 aa25.28■■□□□ 1.64
ARFGAP1-204ENST00000395285 CFTRP13569 1480 aa25.28■■□□□ 1.64
ARFGAP1-204ENST00000395285 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
ARFGAP1-204ENST00000395285 CEP162Q5TB80 1403 aa25.24■■□□□ 1.63
ARFGAP1-204ENST00000395285 TOP2BQ02880 1626 aa25.24■■□□□ 1.63
ARFGAP1-204ENST00000395285 UBTFP17480 764 aaKnown RBP25.23■■□□□ 1.63
ARFGAP1-204ENST00000395285 CENPBP07199 599 aaPredicted RBP25.2■■□□□ 1.62
ARFGAP1-204ENST00000395285 BIVM-ERCC5R4GMW8 1640 aa25.16■■□□□ 1.62
ARFGAP1-204ENST00000395285 TNIKQ9UKE5 1360 aa25.16■■□□□ 1.62
ARFGAP1-204ENST00000395285 GOLGA3Q08378 1498 aa25.12■■□□□ 1.61
ARFGAP1-204ENST00000395285 PRKCSHP14314 528 aaPredicted RBP25.12■■□□□ 1.61
ARFGAP1-204ENST00000395285 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
ARFGAP1-204ENST00000395285 CEP164Q9UPV0 1460 aa25.07■■□□□ 1.6
ARFGAP1-204ENST00000395285 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
ARFGAP1-204ENST00000395285 CUX1P39880 1505 aa25.06■■□□□ 1.6
ARFGAP1-204ENST00000395285 KIF21BO75037 1637 aa25.05■■□□□ 1.6
ARFGAP1-204ENST00000395285 RANGAP1P46060 587 aaPredicted RBP24.9■■□□□ 1.58
ARFGAP1-204ENST00000395285 RAPGEF2Q9Y4G8 1499 aa24.87■■□□□ 1.57
ARFGAP1-204ENST00000395285 DIEXFQ68CQ4 756 aaKnown RBP24.87■■□□□ 1.57
ARFGAP1-204ENST00000395285 KIF27Q86VH2 1401 aa24.86■■□□□ 1.57
ARFGAP1-204ENST00000395285 FANCD2Q9BXW9 1451 aa24.82■■□□□ 1.56
ARFGAP1-204ENST00000395285 PRXQ9BXM0 1461 aa24.81■■□□□ 1.56
ARFGAP1-204ENST00000395285 HNRNPUL2Q1KMD3 747 aaKnown RBP24.81■■□□□ 1.56
ARFGAP1-204ENST00000395285 ERICH3Q5RHP9 1530 aa24.79■■□□□ 1.56
ARFGAP1-204ENST00000395285 CLIP1P30622 1438 aa24.76■■□□□ 1.55
ARFGAP1-204ENST00000395285 NESP48681 1621 aa24.71■■□□□ 1.55
ARFGAP1-204ENST00000395285 FGD5Q6ZNL6 1462 aa24.71■■□□□ 1.55
ARFGAP1-204ENST00000395285 LAMC3Q9Y6N6 1575 aa24.7■■□□□ 1.54
ARFGAP1-204ENST00000395285 ANP32EQ9BTT0 268 aa24.69■■□□□ 1.54
ARFGAP1-204ENST00000395285 CUX2O14529 1486 aa24.68■■□□□ 1.54
ARFGAP1-204ENST00000395285 DNMBPQ6XZF7 1577 aa24.65■■□□□ 1.54
ARFGAP1-204ENST00000395285 APLP2Q06481 763 aa24.64■■□□□ 1.53
ARFGAP1-204ENST00000395285 VPS8Q8N3P4 1428 aa24.61■■□□□ 1.53
ARFGAP1-204ENST00000395285 IGF1RP08069 1367 aa24.6■■□□□ 1.53
ARFGAP1-204ENST00000395285 ZNF316A6NFI3 1004 aaPredicted RBP24.59■■□□□ 1.53
ARFGAP1-204ENST00000395285 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
ARFGAP1-204ENST00000395285 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
ARFGAP1-204ENST00000395285 POLA1P09884 1462 aaPredicted RBP24.53■■□□□ 1.52
ARFGAP1-204ENST00000395285 ERICH6Q7L0X2 663 aa24.52■■□□□ 1.52
ARFGAP1-204ENST00000395285 ABCA10Q8WWZ4 1543 aa24.5■■□□□ 1.51
ARFGAP1-204ENST00000395285 CARMIL1Q5VZK9 1371 aa24.49■■□□□ 1.51
ARFGAP1-204ENST00000395285 RAD54L2Q9Y4B4 1467 aa24.47■■□□□ 1.51
ARFGAP1-204ENST00000395285 URB2Q14146 1524 aaKnown RBP24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms