RNA–Protein interactions for RNA: ENST00000519273.6

ARFGAP1-210, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 3,176 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-210ENST00000519273 NISCHQ9Y2I1 1504 aa32.88■■■□□ 2.85
ARFGAP1-210ENST00000519273 SHROOM4Q9ULL8 1493 aa28.53■■■□□ 2.16
ARFGAP1-210ENST00000519273 SUPT5HO00267 1087 aaKnown RBP28.05■■■□□ 2.08
ARFGAP1-210ENST00000519273 ZCCHC6Q5VYS8 1495 aaKnown RBP27.8■■■□□ 2.04
ARFGAP1-210ENST00000519273 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
ARFGAP1-210ENST00000519273 DCAF8L2P0C7V8 631 aa27.69■■■□□ 2.02
ARFGAP1-210ENST00000519273 CHIC1Q5VXU3 224 aa27.17■■□□□ 1.94
ARFGAP1-210ENST00000519273 MYO15BQ96JP2 1530 aa27.11■■□□□ 1.93
ARFGAP1-210ENST00000519273 DCAF1Q9Y4B6 1507 aa26.78■■□□□ 1.88
ARFGAP1-210ENST00000519273 PCGF6Q9BYE7 350 aa26.61■■□□□ 1.85
ARFGAP1-210ENST00000519273 HRCP23327 699 aa26.56■■□□□ 1.84
ARFGAP1-210ENST00000519273 LOC105371045A0A1W2PR82 267 aa26.54■■□□□ 1.84
ARFGAP1-210ENST00000519273 SCRIBQ14160 1630 aa26.29■■□□□ 1.8
ARFGAP1-210ENST00000519273 ABCC9O60706 1549 aa26.24■■□□□ 1.79
ARFGAP1-210ENST00000519273 PPARGC1BQ86YN6 1023 aaKnown RBP26.2■■□□□ 1.79
ARFGAP1-210ENST00000519273 RSF1Q96T23 1441 aaPredicted RBP26.15■■□□□ 1.78
ARFGAP1-210ENST00000519273 TRIM41Q8WV44 630 aa25.99■■□□□ 1.75
ARFGAP1-210ENST00000519273 FAM9AQ8IZU1 332 aaPredicted RBP25.98■■□□□ 1.75
ARFGAP1-210ENST00000519273 RB1CC1Q8TDY2 1594 aa25.92■■□□□ 1.74
ARFGAP1-210ENST00000519273 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
ARFGAP1-210ENST00000519273 TRIM26Q12899 539 aaPredicted RBP25.9■■□□□ 1.74
ARFGAP1-210ENST00000519273 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
ARFGAP1-210ENST00000519273 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
ARFGAP1-210ENST00000519273 NACADO15069 1562 aa25.66■■□□□ 1.7
ARFGAP1-210ENST00000519273 WIZO95785 1651 aa25.53■■□□□ 1.68
ARFGAP1-210ENST00000519273 ZEB1P37275 1124 aaPredicted RBP25.3■■□□□ 1.64
ARFGAP1-210ENST00000519273 BAZ1AQ9NRL2 1556 aaPredicted RBP25.24■■□□□ 1.63
ARFGAP1-210ENST00000519273 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
ARFGAP1-210ENST00000519273 EIF4G1Q04637 1599 aaKnown RBP25.08■■□□□ 1.61
ARFGAP1-210ENST00000519273 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
ARFGAP1-210ENST00000519273 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
ARFGAP1-210ENST00000519273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.02■■□□□ 1.6
ARFGAP1-210ENST00000519273 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
ARFGAP1-210ENST00000519273 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
ARFGAP1-210ENST00000519273 PABPN1Q86U42 306 aaKnown RBP eCLIP24.97■■□□□ 1.592e-7■■■□□ 17.3
ARFGAP1-210ENST00000519273 SMARCA2P51531 1590 aa24.92■■□□□ 1.58
ARFGAP1-210ENST00000519273 CCER1Q8TC90 406 aaPredicted RBP24.91■■□□□ 1.58
ARFGAP1-210ENST00000519273 SOGA1O94964 1423 aa24.9■■□□□ 1.58
ARFGAP1-210ENST00000519273 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.57
ARFGAP1-210ENST00000519273 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
ARFGAP1-210ENST00000519273 CEP162Q5TB80 1403 aa24.79■■□□□ 1.56
ARFGAP1-210ENST00000519273 RUSC2Q8N2Y8 1516 aa24.79■■□□□ 1.56
ARFGAP1-210ENST00000519273 CSRNP3Q8WYN3 585 aa24.75■■□□□ 1.55
ARFGAP1-210ENST00000519273 TNIKQ9UKE5 1360 aa24.67■■□□□ 1.54
ARFGAP1-210ENST00000519273 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.54
ARFGAP1-210ENST00000519273 SCAF1Q9H7N4 1312 aaKnown RBP24.63■■□□□ 1.53
ARFGAP1-210ENST00000519273 PELP1Q8IZL8 1130 aaKnown RBP24.62■■□□□ 1.53
ARFGAP1-210ENST00000519273 BICRAQ9NZM4 1560 aa24.61■■□□□ 1.53
ARFGAP1-210ENST00000519273 EEA1Q15075 1411 aa24.56■■□□□ 1.52
ARFGAP1-210ENST00000519273 GOLGA3Q08378 1498 aa24.51■■□□□ 1.51
ARFGAP1-210ENST00000519273 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
ARFGAP1-210ENST00000519273 DIEXFQ68CQ4 756 aaKnown RBP24.45■■□□□ 1.5
ARFGAP1-210ENST00000519273 SYNJ1O43426 1573 aa24.43■■□□□ 1.5
ARFGAP1-210ENST00000519273 HNRNPUL2Q1KMD3 747 aaKnown RBP24.39■■□□□ 1.5
ARFGAP1-210ENST00000519273 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
ARFGAP1-210ENST00000519273 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
ARFGAP1-210ENST00000519273 BAZ1BQ9UIG0 1483 aaKnown RBP24.34■■□□□ 1.49
ARFGAP1-210ENST00000519273 NEUROD1Q13562 356 aa24.34■■□□□ 1.49
ARFGAP1-210ENST00000519273 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
ARFGAP1-210ENST00000519273 CLIP1P30622 1438 aa24.31■■□□□ 1.48
ARFGAP1-210ENST00000519273 ACIN1Q9UKV3 1341 aaKnown RBP24.29■■□□□ 1.48
ARFGAP1-210ENST00000519273 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
ARFGAP1-210ENST00000519273 KIF21BO75037 1637 aa24.22■■□□□ 1.47
ARFGAP1-210ENST00000519273 APLP2Q06481 763 aa24.22■■□□□ 1.47
ARFGAP1-210ENST00000519273 ZNF316A6NFI3 1004 aaPredicted RBP24.19■■□□□ 1.46
ARFGAP1-210ENST00000519273 VPS8Q8N3P4 1428 aa24.16■■□□□ 1.46
ARFGAP1-210ENST00000519273 CENPBP07199 599 aaPredicted RBP24.11■■□□□ 1.45
ARFGAP1-210ENST00000519273 GTF3C3Q9Y5Q9 886 aa24.11■■□□□ 1.45
ARFGAP1-210ENST00000519273 MYT1Q01538 1121 aa24.1■■□□□ 1.45
ARFGAP1-210ENST00000519273 YTHDC1Q96MU7 727 aaKnown RBP24.05■■□□□ 1.44
ARFGAP1-210ENST00000519273 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
ARFGAP1-210ENST00000519273 MIER1Q8N108 512 aa23.95■■□□□ 1.42
ARFGAP1-210ENST00000519273 KANK4Q5T7N3 995 aaPredicted RBP23.92■■□□□ 1.42
ARFGAP1-210ENST00000519273 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
ARFGAP1-210ENST00000519273 PRXQ9BXM0 1461 aa23.88■■□□□ 1.41
ARFGAP1-210ENST00000519273 ARAP1Q96P48 1450 aa23.85■■□□□ 1.41
ARFGAP1-210ENST00000519273 CUX1P39880 1505 aa23.85■■□□□ 1.41
ARFGAP1-210ENST00000519273 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
ARFGAP1-210ENST00000519273 ERICH3Q5RHP9 1530 aa23.79■■□□□ 1.4
ARFGAP1-210ENST00000519273 KIF27Q86VH2 1401 aa23.78■■□□□ 1.4
ARFGAP1-210ENST00000519273 ITGAEP38570 1179 aa23.75■■□□□ 1.39
ARFGAP1-210ENST00000519273 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
ARFGAP1-210ENST00000519273 DHX57Q6P158 1386 aaKnown RBP23.73■■□□□ 1.39
ARFGAP1-210ENST00000519273 CFTRP13569 1480 aa23.69■■□□□ 1.38
ARFGAP1-210ENST00000519273 ARHGAP35Q9NRY4 1499 aa23.64■■□□□ 1.37
ARFGAP1-210ENST00000519273 CUX2O14529 1486 aa23.59■■□□□ 1.37
ARFGAP1-210ENST00000519273 RRBP1Q9P2E9 1410 aaKnown RBP23.57■■□□□ 1.36
ARFGAP1-210ENST00000519273 CLSPNQ9HAW4 1339 aa23.57■■□□□ 1.36
ARFGAP1-210ENST00000519273 CCNB3Q8WWL7 1395 aa23.57■■□□□ 1.36
ARFGAP1-210ENST00000519273 IGF1RP08069 1367 aa23.55■■□□□ 1.36
ARFGAP1-210ENST00000519273 P3H3Q8IVL6 736 aa23.51■■□□□ 1.35
ARFGAP1-210ENST00000519273 ATP1B4Q9UN42 357 aaPredicted RBP23.49■■□□□ 1.35
ARFGAP1-210ENST00000519273 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
ARFGAP1-210ENST00000519273 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
ARFGAP1-210ENST00000519273 FGD5Q6ZNL6 1462 aa23.43■■□□□ 1.34
ARFGAP1-210ENST00000519273 RAB3GAP2Q9H2M9 1393 aa23.41■■□□□ 1.34
ARFGAP1-210ENST00000519273 FAM50AQ14320 339 aaKnown RBP23.4■■□□□ 1.34
ARFGAP1-210ENST00000519273 TIAM1Q13009 1591 aa23.34■■□□□ 1.33
ARFGAP1-210ENST00000519273 PHLDB1Q86UU1 1377 aa23.34■■□□□ 1.33
ARFGAP1-210ENST00000519273 PRDM2Q13029 1718 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms