RNA–Protein interactions for RNA: ENST00000468975.6

ARFGAP1-205, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 2,640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-205ENST00000468975 NISCHQ9Y2I1 1504 aa36.33■■■■□ 3.41
ARFGAP1-205ENST00000468975 CCDC180Q9P1Z9 1646 aa31.5■■■□□ 2.63
ARFGAP1-205ENST00000468975 ZCCHC6Q5VYS8 1495 aaKnown RBP30.55■■■□□ 2.48
ARFGAP1-205ENST00000468975 DCAF8L2P0C7V8 631 aa30.15■■■□□ 2.42
ARFGAP1-205ENST00000468975 SHROOM4Q9ULL8 1493 aa29.97■■■□□ 2.39
ARFGAP1-205ENST00000468975 DCAF1Q9Y4B6 1507 aa29.94■■■□□ 2.38
ARFGAP1-205ENST00000468975 ABCC9O60706 1549 aa29.84■■■□□ 2.37
ARFGAP1-205ENST00000468975 MYO15BQ96JP2 1530 aa29.49■■■□□ 2.31
ARFGAP1-205ENST00000468975 NACADO15069 1562 aa29.32■■■□□ 2.28
ARFGAP1-205ENST00000468975 SUPT5HO00267 1087 aaKnown RBP29.19■■■□□ 2.26
ARFGAP1-205ENST00000468975 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
ARFGAP1-205ENST00000468975 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
ARFGAP1-205ENST00000468975 HRCP23327 699 aa28.62■■■□□ 2.17
ARFGAP1-205ENST00000468975 CHIC1Q5VXU3 224 aa28.58■■■□□ 2.17
ARFGAP1-205ENST00000468975 UNC13AQ9UPW8 1703 aa28.56■■■□□ 2.16
ARFGAP1-205ENST00000468975 CECR2Q9BXF3 1484 aa28.32■■■□□ 2.12
ARFGAP1-205ENST00000468975 RSF1Q96T23 1441 aaPredicted RBP28.3■■■□□ 2.12
ARFGAP1-205ENST00000468975 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
ARFGAP1-205ENST00000468975 BICRAQ9NZM4 1560 aa28.25■■■□□ 2.11
ARFGAP1-205ENST00000468975 PABPN1Q86U42 306 aaKnown RBP eCLIP28.24■■■□□ 2.112e-7■■■□□ 17.3
ARFGAP1-205ENST00000468975 MROH2BQ7Z745 1585 aa28.14■■■□□ 2.1
ARFGAP1-205ENST00000468975 PPARGC1BQ86YN6 1023 aaKnown RBP28.05■■■□□ 2.08
ARFGAP1-205ENST00000468975 BAZ1AQ9NRL2 1556 aaPredicted RBP28.01■■■□□ 2.07
ARFGAP1-205ENST00000468975 WIZO95785 1651 aa27.93■■■□□ 2.06
ARFGAP1-205ENST00000468975 SMARCA4P51532 1647 aa27.89■■■□□ 2.06
ARFGAP1-205ENST00000468975 LOC105371045A0A1W2PR82 267 aa27.84■■■□□ 2.05
ARFGAP1-205ENST00000468975 TOP2AP11388 1531 aaKnown RBP27.55■■■□□ 2
ARFGAP1-205ENST00000468975 TRIM26Q12899 539 aaPredicted RBP27.54■■■□□ 2
ARFGAP1-205ENST00000468975 PEG3Q9GZU2 1588 aa27.48■■□□□ 1.99
ARFGAP1-205ENST00000468975 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
ARFGAP1-205ENST00000468975 EIF4G1Q04637 1599 aaKnown RBP27.37■■□□□ 1.97
ARFGAP1-205ENST00000468975 CCDC88BA6NC98 1476 aa27.35■■□□□ 1.97
ARFGAP1-205ENST00000468975 SMARCA2P51531 1590 aa27.34■■□□□ 1.97
ARFGAP1-205ENST00000468975 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
ARFGAP1-205ENST00000468975 ZEB1P37275 1124 aaPredicted RBP27.11■■□□□ 1.93
ARFGAP1-205ENST00000468975 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
ARFGAP1-205ENST00000468975 TRIM41Q8WV44 630 aa27.08■■□□□ 1.93
ARFGAP1-205ENST00000468975 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
ARFGAP1-205ENST00000468975 FAM9AQ8IZU1 332 aaPredicted RBP26.98■■□□□ 1.91
ARFGAP1-205ENST00000468975 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
ARFGAP1-205ENST00000468975 ABCC8Q09428 1581 aa26.89■■□□□ 1.89
ARFGAP1-205ENST00000468975 EHMT2Q96KQ7 1210 aa26.82■■□□□ 1.88
ARFGAP1-205ENST00000468975 SCAF1Q9H7N4 1312 aaKnown RBP26.77■■□□□ 1.88
ARFGAP1-205ENST00000468975 PELP1Q8IZL8 1130 aaKnown RBP26.69■■□□□ 1.86
ARFGAP1-205ENST00000468975 WRNQ14191 1432 aaPredicted RBP eCLIP26.62■■□□□ 1.85
ARFGAP1-205ENST00000468975 CFTRP13569 1480 aa26.57■■□□□ 1.84
ARFGAP1-205ENST00000468975 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
ARFGAP1-205ENST00000468975 CADPSQ9ULU8 1353 aa26.46■■□□□ 1.83
ARFGAP1-205ENST00000468975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.43■■□□□ 1.82
ARFGAP1-205ENST00000468975 SOGA1O94964 1423 aa26.42■■□□□ 1.82
ARFGAP1-205ENST00000468975 DNAJC5BQ9UF47 199 aa26.41■■□□□ 1.82
ARFGAP1-205ENST00000468975 PRDM2Q13029 1718 aa26.38■■□□□ 1.81
ARFGAP1-205ENST00000468975 TOP2BQ02880 1626 aa26.35■■□□□ 1.81
ARFGAP1-205ENST00000468975 CCER1Q8TC90 406 aaPredicted RBP26.35■■□□□ 1.81
ARFGAP1-205ENST00000468975 RUSC2Q8N2Y8 1516 aa26.33■■□□□ 1.81
ARFGAP1-205ENST00000468975 BIVM-ERCC5R4GMW8 1640 aa26.29■■□□□ 1.8
ARFGAP1-205ENST00000468975 CUX1P39880 1505 aa26.28■■□□□ 1.8
ARFGAP1-205ENST00000468975 ACIN1Q9UKV3 1341 aaKnown RBP26.28■■□□□ 1.8
ARFGAP1-205ENST00000468975 NESP48681 1621 aa26.27■■□□□ 1.8
ARFGAP1-205ENST00000468975 NEUROD1Q13562 356 aa26.24■■□□□ 1.79
ARFGAP1-205ENST00000468975 EEA1Q15075 1411 aa26.23■■□□□ 1.79
ARFGAP1-205ENST00000468975 CSRNP3Q8WYN3 585 aa26.19■■□□□ 1.78
ARFGAP1-205ENST00000468975 FANCD2Q9BXW9 1451 aa26.18■■□□□ 1.78
ARFGAP1-205ENST00000468975 LAMC3Q9Y6N6 1575 aa26.13■■□□□ 1.77
ARFGAP1-205ENST00000468975 DIEXFQ68CQ4 756 aaKnown RBP26.12■■□□□ 1.77
ARFGAP1-205ENST00000468975 TTBK1Q5TCY1 1321 aaPredicted RBP26.09■■□□□ 1.77
ARFGAP1-205ENST00000468975 GTF3C3Q9Y5Q9 886 aa26.01■■□□□ 1.76
ARFGAP1-205ENST00000468975 CEP162Q5TB80 1403 aa26.01■■□□□ 1.75
ARFGAP1-205ENST00000468975 CENPBP07199 599 aaPredicted RBP25.99■■□□□ 1.75
ARFGAP1-205ENST00000468975 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
ARFGAP1-205ENST00000468975 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
ARFGAP1-205ENST00000468975 PDS5BQ9NTI5 1447 aa25.95■■□□□ 1.74
ARFGAP1-205ENST00000468975 GOLGA3Q08378 1498 aa25.95■■□□□ 1.74
ARFGAP1-205ENST00000468975 DNMBPQ6XZF7 1577 aa25.93■■□□□ 1.74
ARFGAP1-205ENST00000468975 UBTFP17480 764 aaKnown RBP25.93■■□□□ 1.74
ARFGAP1-205ENST00000468975 KIF21BO75037 1637 aa25.92■■□□□ 1.74
ARFGAP1-205ENST00000468975 TOPBP1Q92547 1522 aa25.91■■□□□ 1.74
ARFGAP1-205ENST00000468975 TNIKQ9UKE5 1360 aa25.9■■□□□ 1.74
ARFGAP1-205ENST00000468975 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
ARFGAP1-205ENST00000468975 KIF21AQ7Z4S6 1674 aa25.89■■□□□ 1.73
ARFGAP1-205ENST00000468975 URB2Q14146 1524 aaKnown RBP25.86■■□□□ 1.73
ARFGAP1-205ENST00000468975 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
ARFGAP1-205ENST00000468975 CUX2O14529 1486 aa25.85■■□□□ 1.73
ARFGAP1-205ENST00000468975 POLA1P09884 1462 aaPredicted RBP25.82■■□□□ 1.72
ARFGAP1-205ENST00000468975 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
ARFGAP1-205ENST00000468975 PRXQ9BXM0 1461 aa25.78■■□□□ 1.72
ARFGAP1-205ENST00000468975 ZNF316A6NFI3 1004 aaPredicted RBP25.77■■□□□ 1.72
ARFGAP1-205ENST00000468975 IGF1RP08069 1367 aa25.7■■□□□ 1.71
ARFGAP1-205ENST00000468975 ERICH3Q5RHP9 1530 aa25.7■■□□□ 1.7
ARFGAP1-205ENST00000468975 ABCA10Q8WWZ4 1543 aa25.69■■□□□ 1.7
ARFGAP1-205ENST00000468975 YTHDC1Q96MU7 727 aaKnown RBP25.62■■□□□ 1.69
ARFGAP1-205ENST00000468975 MRC2Q9UBG0 1479 aa25.62■■□□□ 1.69
ARFGAP1-205ENST00000468975 CLIP1P30622 1438 aa25.58■■□□□ 1.69
ARFGAP1-205ENST00000468975 WDR97A6NE52 1622 aa25.58■■□□□ 1.69
ARFGAP1-205ENST00000468975 RANGAP1P46060 587 aaPredicted RBP25.58■■□□□ 1.69
ARFGAP1-205ENST00000468975 CARMIL1Q5VZK9 1371 aa25.57■■□□□ 1.68
ARFGAP1-205ENST00000468975 TDRD9Q8NDG6 1382 aaKnown RBP25.54■■□□□ 1.68
ARFGAP1-205ENST00000468975 HNRNPUL2Q1KMD3 747 aaKnown RBP25.53■■□□□ 1.68
ARFGAP1-205ENST00000468975 MIER1Q8N108 512 aa25.53■■□□□ 1.68
ARFGAP1-205ENST00000468975 ERCC6Q03468 1493 aa25.51■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms