RNA–Protein interactions for RNA: ENST00000592099.5

PTPRS-210, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best) BASIC

Gene PTPRS, Length 4,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-210ENST00000592099 NISCHQ9Y2I1 1504 aa21.69■■□□□ 1.06
PTPRS-210ENST00000592099 DCAF8L2P0C7V8 631 aa21.07■□□□□ 0.96
PTPRS-210ENST00000592099 SUPT5HO00267 1087 aaKnown RBP20.34■□□□□ 0.85
PTPRS-210ENST00000592099 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
PTPRS-210ENST00000592099 EHMT2Q96KQ7 1210 aa19.35■□□□□ 0.69
PTPRS-210ENST00000592099 FAM9AQ8IZU1 332 aaPredicted RBP19.07■□□□□ 0.64
PTPRS-210ENST00000592099 APLP2Q06481 763 aa19.04■□□□□ 0.64
PTPRS-210ENST00000592099 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
PTPRS-210ENST00000592099 TRIM41Q8WV44 630 aa18.82■□□□□ 0.6
PTPRS-210ENST00000592099 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
PTPRS-210ENST00000592099 TTBK1Q5TCY1 1321 aaPredicted RBP18.66■□□□□ 0.58
PTPRS-210ENST00000592099 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
PTPRS-210ENST00000592099 RANGAP1P46060 587 aaPredicted RBP18.46■□□□□ 0.55
PTPRS-210ENST00000592099 ZEB1P37275 1124 aaPredicted RBP18.44■□□□□ 0.54
PTPRS-210ENST00000592099 LOC105371045A0A1W2PR82 267 aa18.44■□□□□ 0.54
PTPRS-210ENST00000592099 UBTFP17480 764 aaKnown RBP18.39■□□□□ 0.53
PTPRS-210ENST00000592099 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
PTPRS-210ENST00000592099 PPARGC1BQ86YN6 1023 aaKnown RBP18.32■□□□□ 0.52
PTPRS-210ENST00000592099 ATP1B4Q9UN42 357 aaPredicted RBP18.3■□□□□ 0.52
PTPRS-210ENST00000592099 CENPBP07199 599 aaPredicted RBP18.26■□□□□ 0.51
PTPRS-210ENST00000592099 ABCC9O60706 1549 aa18.24■□□□□ 0.51
PTPRS-210ENST00000592099 TRIM26Q12899 539 aaPredicted RBP18.22■□□□□ 0.51
PTPRS-210ENST00000592099 HRCP23327 699 aa18.16■□□□□ 0.5
PTPRS-210ENST00000592099 ZCCHC6Q5VYS8 1495 aaKnown RBP18.05■□□□□ 0.48
PTPRS-210ENST00000592099 PABPN1Q86U42 306 aaKnown RBP eCLIP18■□□□□ 0.479e-7■■□□□ 12.3
PTPRS-210ENST00000592099 ERICH6Q7L0X2 663 aa17.89■□□□□ 0.45
PTPRS-210ENST00000592099 NEFLP07196 543 aa17.86■□□□□ 0.45
PTPRS-210ENST00000592099 CCDC180Q9P1Z9 1646 aa17.79■□□□□ 0.44
PTPRS-210ENST00000592099 HNRNPUL2Q1KMD3 747 aaKnown RBP17.78■□□□□ 0.44
PTPRS-210ENST00000592099 YTHDC1Q96MU7 727 aaKnown RBP17.76■□□□□ 0.43
PTPRS-210ENST00000592099 MYT1Q01538 1121 aa17.75■□□□□ 0.43
PTPRS-210ENST00000592099 ITGAEP38570 1179 aa17.73■□□□□ 0.43
PTPRS-210ENST00000592099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
PTPRS-210ENST00000592099 SCRIBQ14160 1630 aa17.7■□□□□ 0.42
PTPRS-210ENST00000592099 MYT1LQ9UL68 1186 aa17.58■□□□□ 0.4
PTPRS-210ENST00000592099 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
PTPRS-210ENST00000592099 POLR3GLQ9BT43 218 aa17.47■□□□□ 0.39
PTPRS-210ENST00000592099 MYO15BQ96JP2 1530 aa17.41■□□□□ 0.38
PTPRS-210ENST00000592099 DIEXFQ68CQ4 756 aaKnown RBP17.4■□□□□ 0.38
PTPRS-210ENST00000592099 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.37
PTPRS-210ENST00000592099 DCAF1Q9Y4B6 1507 aa17.34■□□□□ 0.37
PTPRS-210ENST00000592099 FAM50AQ14320 339 aaKnown RBP17.32■□□□□ 0.36
PTPRS-210ENST00000592099 DAXXQ9UER7 740 aaPredicted RBP17.25■□□□□ 0.35
PTPRS-210ENST00000592099 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
PTPRS-210ENST00000592099 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
PTPRS-210ENST00000592099 TRIM52Q96A61 297 aa17.2■□□□□ 0.34
PTPRS-210ENST00000592099 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
PTPRS-210ENST00000592099 RB1CC1Q8TDY2 1594 aa17.16■□□□□ 0.34
PTPRS-210ENST00000592099 NACADO15069 1562 aa17.15■□□□□ 0.34
PTPRS-210ENST00000592099 SLC4A1APQ9BWU0 796 aaKnown RBP17.13■□□□□ 0.33
PTPRS-210ENST00000592099 ZNF316A6NFI3 1004 aaPredicted RBP17.11■□□□□ 0.33
PTPRS-210ENST00000592099 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
PTPRS-210ENST00000592099 FBLN2P98095 1184 aa17.03■□□□□ 0.32
PTPRS-210ENST00000592099 ARID3CA6NKF2 412 aa17■□□□□ 0.31
PTPRS-210ENST00000592099 GTF3C3Q9Y5Q9 886 aa16.98■□□□□ 0.31
PTPRS-210ENST00000592099 ANP32CO43423 234 aa16.97■□□□□ 0.31
PTPRS-210ENST00000592099 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
PTPRS-210ENST00000592099 ZNF326Q5BKZ1 582 aaKnown RBP16.94■□□□□ 0.3
PTPRS-210ENST00000592099 CLIP1P30622 1438 aa16.91■□□□□ 0.3
PTPRS-210ENST00000592099 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
PTPRS-210ENST00000592099 BAZ1AQ9NRL2 1556 aaPredicted RBP16.91■□□□□ 0.3
PTPRS-210ENST00000592099 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
PTPRS-210ENST00000592099 EEA1Q15075 1411 aa16.88■□□□□ 0.29
PTPRS-210ENST00000592099 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
PTPRS-210ENST00000592099 ACIN1Q9UKV3 1341 aaKnown RBP16.86■□□□□ 0.29
PTPRS-210ENST00000592099 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
PTPRS-210ENST00000592099 RTL5Q5HYW3 569 aaPredicted RBP16.84■□□□□ 0.29
PTPRS-210ENST00000592099 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
PTPRS-210ENST00000592099 GOLGA3Q08378 1498 aa16.83■□□□□ 0.28
PTPRS-210ENST00000592099 TNIKQ9UKE5 1360 aa16.8■□□□□ 0.28
PTPRS-210ENST00000592099 ZNF777Q9ULD5 760 aaPredicted RBP16.76■□□□□ 0.27
PTPRS-210ENST00000592099 BCANQ96GW7 911 aa16.75■□□□□ 0.27
PTPRS-210ENST00000592099 SOGA1O94964 1423 aa16.75■□□□□ 0.27
PTPRS-210ENST00000592099 CCDC88BA6NC98 1476 aa16.7■□□□□ 0.26
PTPRS-210ENST00000592099 CEP164Q9UPV0 1460 aa16.7■□□□□ 0.26
PTPRS-210ENST00000592099 ZBTB47Q9UFB7 747 aaPredicted RBP16.68■□□□□ 0.26
PTPRS-210ENST00000592099 CHIC2Q9UKJ5 165 aa16.68■□□□□ 0.26
PTPRS-210ENST00000592099 NEFMP07197 916 aa16.66■□□□□ 0.26
PTPRS-210ENST00000592099 TONSLQ96HA7 1378 aa16.66■□□□□ 0.26
PTPRS-210ENST00000592099 KIF27Q86VH2 1401 aa16.66■□□□□ 0.26
PTPRS-210ENST00000592099 DDX10Q13206 875 aaKnown RBP16.65■□□□□ 0.26
PTPRS-210ENST00000592099 ABCC8Q09428 1581 aa16.65■□□□□ 0.26
PTPRS-210ENST00000592099 MTUS2Q5JR59 1369 aa16.64■□□□□ 0.25
PTPRS-210ENST00000592099 WIZO95785 1651 aa16.62■□□□□ 0.25
PTPRS-210ENST00000592099 MIER1Q8N108 512 aa16.61■□□□□ 0.25
PTPRS-210ENST00000592099 CANXP27824 592 aaKnown RBP16.61■□□□□ 0.25
PTPRS-210ENST00000592099 HIRIP3Q9BW71 556 aaPredicted RBP16.54■□□□□ 0.24
PTPRS-210ENST00000592099 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTPRS-210ENST00000592099 ESF1Q9H501 851 aaKnown RBP16.53■□□□□ 0.24
PTPRS-210ENST00000592099 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
PTPRS-210ENST00000592099 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
PTPRS-210ENST00000592099 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
PTPRS-210ENST00000592099 RRP7BPQ9NSQ0 103 aa16.5■□□□□ 0.23
PTPRS-210ENST00000592099 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
PTPRS-210ENST00000592099 CHGAP10645 457 aaKnown RBP16.47■□□□□ 0.23
PTPRS-210ENST00000592099 TSPY4P0CV99 314 aa16.47■□□□□ 0.23
PTPRS-210ENST00000592099 TSPY10P0CW01 314 aa16.47■□□□□ 0.23
PTPRS-210ENST00000592099 CUX2O14529 1486 aa16.45■□□□□ 0.22
PTPRS-210ENST00000592099 STAG3Q9UJ98 1225 aa16.44■□□□□ 0.22
PTPRS-210ENST00000592099 CARMIL1Q5VZK9 1371 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms