RNA–Protein interactions for RNA: ENST00000476817.1

CTBP2-208, Transcript of C-terminal binding protein 2, humanhuman

TSL 3

Gene CTBP2, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTBP2-208ENST00000476817 NISCHQ9Y2I1 1504 aa51.64■■■■■ 5.86
CTBP2-208ENST00000476817 CCDC180Q9P1Z9 1646 aa46.06■■■■■ 4.96
CTBP2-208ENST00000476817 ABCC9O60706 1549 aa45.69■■■■■ 4.9
CTBP2-208ENST00000476817 RB1CC1Q8TDY2 1594 aa43.65■■■■■ 4.58
CTBP2-208ENST00000476817 NACADO15069 1562 aa43.49■■■■■ 4.55
CTBP2-208ENST00000476817 DCAF8L2P0C7V8 631 aa43.44■■■■■ 4.54
CTBP2-208ENST00000476817 MYO15BQ96JP2 1530 aa43.06■■■■■ 4.48
CTBP2-208ENST00000476817 ZCCHC6Q5VYS8 1495 aaKnown RBP42.88■■■■■ 4.46
CTBP2-208ENST00000476817 DCAF1Q9Y4B6 1507 aa42.67■■■■■ 4.42
CTBP2-208ENST00000476817 PABPN1Q86U42 306 aaKnown RBP eCLIP42.67■■■■■ 4.42
CTBP2-208ENST00000476817 UNC13AQ9UPW8 1703 aa42.61■■■■■ 4.41
CTBP2-208ENST00000476817 DNAJC5BQ9UF47 199 aa42.52■■■■■ 4.4
CTBP2-208ENST00000476817 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
CTBP2-208ENST00000476817 SCRIBQ14160 1630 aa42.02■■■■■ 4.32
CTBP2-208ENST00000476817 SHROOM4Q9ULL8 1493 aa41.85■■■■■ 4.29
CTBP2-208ENST00000476817 EIF4G1Q04637 1599 aaKnown RBP41.3■■■■■ 4.2
CTBP2-208ENST00000476817 CC2D2AQ9P2K1 1620 aa41.27■■■■■ 4.2
CTBP2-208ENST00000476817 CECR2Q9BXF3 1484 aa41.11■■■■■ 4.17
CTBP2-208ENST00000476817 NCAPD3P42695 1498 aa40.19■■■■■ 4.02
CTBP2-208ENST00000476817 SMARCA4P51532 1647 aa40.15■■■■■ 4.02
CTBP2-208ENST00000476817 ATAD2BQ9ULI0 1458 aa40.12■■■■■ 4.01
CTBP2-208ENST00000476817 BAZ1AQ9NRL2 1556 aaPredicted RBP40.02■■■■■ 4
CTBP2-208ENST00000476817 SMARCA2P51531 1590 aa40■■■■□ 3.99
CTBP2-208ENST00000476817 HMGXB3Q12766 1538 aa39.87■■■■□ 3.97
CTBP2-208ENST00000476817 MROH2BQ7Z745 1585 aa39.8■■■■□ 3.96
CTBP2-208ENST00000476817 PEG3Q9GZU2 1588 aa39.76■■■■□ 3.96
CTBP2-208ENST00000476817 BAZ1BQ9UIG0 1483 aaKnown RBP39.73■■■■□ 3.95
CTBP2-208ENST00000476817 ERCC6Q03468 1493 aa39.39■■■■□ 3.9
CTBP2-208ENST00000476817 NESP48681 1621 aa39.39■■■■□ 3.9
CTBP2-208ENST00000476817 WIZO95785 1651 aa39.31■■■■□ 3.88
CTBP2-208ENST00000476817 CUX2O14529 1486 aa39.17■■■■□ 3.86
CTBP2-208ENST00000476817 RSF1Q96T23 1441 aaPredicted RBP39.17■■■■□ 3.86
CTBP2-208ENST00000476817 LAMC3Q9Y6N6 1575 aa39.15■■■■□ 3.86
CTBP2-208ENST00000476817 CADPSQ9ULU8 1353 aa38.99■■■■□ 3.83
CTBP2-208ENST00000476817 PDS5BQ9NTI5 1447 aa38.95■■■■□ 3.83
CTBP2-208ENST00000476817 TOP2AP11388 1531 aaKnown RBP38.85■■■■□ 3.81
CTBP2-208ENST00000476817 THOC2Q8NI27 1593 aaKnown RBP38.84■■■■□ 3.81
CTBP2-208ENST00000476817 KIF21AQ7Z4S6 1674 aa38.81■■■■□ 3.8
CTBP2-208ENST00000476817 DNAJC5Q9H3Z4 198 aa38.69■■■■□ 3.78
CTBP2-208ENST00000476817 CFTRP13569 1480 aa38.64■■■■□ 3.78
CTBP2-208ENST00000476817 MRC2Q9UBG0 1479 aa38.57■■■■□ 3.76
CTBP2-208ENST00000476817 FANCD2Q9BXW9 1451 aa38.52■■■■□ 3.76
CTBP2-208ENST00000476817 CEP164Q9UPV0 1460 aa38.5■■■■□ 3.75
CTBP2-208ENST00000476817 CCDC88BA6NC98 1476 aa38.46■■■■□ 3.75
CTBP2-208ENST00000476817 WDR62O43379 1518 aa38.44■■■■□ 3.74
CTBP2-208ENST00000476817 URB2Q14146 1524 aaKnown RBP38.17■■■■□ 3.7
CTBP2-208ENST00000476817 PRDM2Q13029 1718 aa38.15■■■■□ 3.7
CTBP2-208ENST00000476817 TOPBP1Q92547 1522 aa37.84■■■■□ 3.65
CTBP2-208ENST00000476817 SUPT5HO00267 1087 aaKnown RBP37.81■■■■□ 3.64
CTBP2-208ENST00000476817 ABCC8Q09428 1581 aa37.79■■■■□ 3.64
CTBP2-208ENST00000476817 IFT140Q96RY7 1462 aa37.73■■■■□ 3.63
CTBP2-208ENST00000476817 DNMBPQ6XZF7 1577 aa37.72■■■■□ 3.63
CTBP2-208ENST00000476817 ZNF608Q9ULD9 1512 aaPredicted RBP37.64■■■■□ 3.62
CTBP2-208ENST00000476817 OSCARQ8IYS5 282 aa37.53■■■■□ 3.6
CTBP2-208ENST00000476817 POLA1P09884 1462 aaPredicted RBP37.49■■■■□ 3.59
CTBP2-208ENST00000476817 TARBP1Q13395 1621 aaKnown RBP37.45■■■■□ 3.59
CTBP2-208ENST00000476817 EIF4G3O43432 1585 aaKnown RBP37.39■■■■□ 3.58
CTBP2-208ENST00000476817 AQRO60306 1485 aaKnown RBP eCLIP37.38■■■■□ 3.57
CTBP2-208ENST00000476817 CUX1P39880 1505 aa37.36■■■■□ 3.57
CTBP2-208ENST00000476817 RAD54L2Q9Y4B4 1467 aa37.36■■■■□ 3.57
CTBP2-208ENST00000476817 SOGA1O94964 1423 aa37.36■■■■□ 3.57
CTBP2-208ENST00000476817 FGD5Q6ZNL6 1462 aa37.32■■■■□ 3.56
CTBP2-208ENST00000476817 TDRD9Q8NDG6 1382 aaKnown RBP37.23■■■■□ 3.55
CTBP2-208ENST00000476817 TRIM41Q8WV44 630 aa37.16■■■■□ 3.54
CTBP2-208ENST00000476817 WDR97A6NE52 1622 aa37.07■■■■□ 3.53
CTBP2-208ENST00000476817 FBLN2P98095 1184 aa37.04■■■■□ 3.52
CTBP2-208ENST00000476817 CHD1O14646 1710 aa37■■■■□ 3.51
CTBP2-208ENST00000476817 SNAPC4Q5SXM2 1469 aa36.97■■■■□ 3.51
CTBP2-208ENST00000476817 GRIN2BQ13224 1484 aa36.95■■■■□ 3.51
CTBP2-208ENST00000476817 ABCA10Q8WWZ4 1543 aa36.93■■■■□ 3.5
CTBP2-208ENST00000476817 WRNQ14191 1432 aaPredicted RBP eCLIP36.93■■■■□ 3.55e-6■■■□□ 14.6
CTBP2-208ENST00000476817 MAGI1Q96QZ7 1491 aaPredicted RBP36.89■■■■□ 3.5
CTBP2-208ENST00000476817 RIMBP3CA6NJZ7 1639 aa36.89■■■■□ 3.5
CTBP2-208ENST00000476817 RIMBP3BA6NNM3 1639 aa36.89■■■■□ 3.5
CTBP2-208ENST00000476817 RIMBP3Q9UFD9 1639 aa36.89■■■■□ 3.5
CTBP2-208ENST00000476817 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.5
CTBP2-208ENST00000476817 TOP2BQ02880 1626 aa36.86■■■■□ 3.49
CTBP2-208ENST00000476817 ARHGEF11O15085 1522 aa36.85■■■■□ 3.49
CTBP2-208ENST00000476817 CHMP7Q8WUX9 453 aaPredicted RBP36.85■■■■□ 3.49
CTBP2-208ENST00000476817 BIVM-ERCC5R4GMW8 1640 aa36.84■■■■□ 3.49
CTBP2-208ENST00000476817 SYNJ1O43426 1573 aa36.83■■■■□ 3.49
CTBP2-208ENST00000476817 ABCA5Q8WWZ7 1642 aa36.79■■■■□ 3.48
CTBP2-208ENST00000476817 SYNJ2O15056 1496 aa36.77■■■■□ 3.48
CTBP2-208ENST00000476817 PBRM1Q86U86 1689 aa36.75■■■■□ 3.47
CTBP2-208ENST00000476817 CLASP1Q7Z460 1538 aa36.64■■■■□ 3.46
CTBP2-208ENST00000476817 CYB5RLQ6IPT4 315 aa36.62■■■■□ 3.45
CTBP2-208ENST00000476817 ARAP1Q96P48 1450 aa36.54■■■■□ 3.44
CTBP2-208ENST00000476817 ADAMTS12P58397 1594 aa36.48■■■■□ 3.43
CTBP2-208ENST00000476817 GRIN2AQ12879 1464 aa36.46■■■■□ 3.43
CTBP2-208ENST00000476817 ERICH3Q5RHP9 1530 aa36.45■■■■□ 3.43
CTBP2-208ENST00000476817 FHAD1B1AJZ9 1412 aa36.44■■■■□ 3.42
CTBP2-208ENST00000476817 NUP160Q12769 1436 aa36.34■■■■□ 3.41
CTBP2-208ENST00000476817 CEP170Q5SW79 1584 aa36.31■■■■□ 3.4
CTBP2-208ENST00000476817 KIF27Q86VH2 1401 aa36.19■■■■□ 3.38
CTBP2-208ENST00000476817 IGF1RP08069 1367 aa36.17■■■■□ 3.38
CTBP2-208ENST00000476817 ERCC6L2Q5T890 1561 aa36.13■■■■□ 3.37
CTBP2-208ENST00000476817 SHROOM2Q13796 1616 aa36.08■■■■□ 3.37
CTBP2-208ENST00000476817 TRHP20396 242 aaPredicted RBP36.04■■■■□ 3.36
CTBP2-208ENST00000476817 JPH4Q96JJ6 628 aa36.02■■■■□ 3.36
CTBP2-208ENST00000476817 CUL7Q14999 1698 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 341.2 ms