RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
PTPRS-204ENST00000587303 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
PTPRS-204ENST00000587303 EHMT2Q96KQ7 1210 aa22.32■■□□□ 1.16
PTPRS-204ENST00000587303 SHROOM4Q9ULL8 1493 aa22.16■■□□□ 1.14
PTPRS-204ENST00000587303 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
PTPRS-204ENST00000587303 APLP2Q06481 763 aa21.69■■□□□ 1.06
PTPRS-204ENST00000587303 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.06
PTPRS-204ENST00000587303 PELP1Q8IZL8 1130 aaKnown RBP21.62■■□□□ 1.05
PTPRS-204ENST00000587303 TTBK1Q5TCY1 1321 aaPredicted RBP21.49■■□□□ 1.03
PTPRS-204ENST00000587303 RANGAP1P46060 587 aaPredicted RBP21.25■□□□□ 0.99
PTPRS-204ENST00000587303 ATP1B4Q9UN42 357 aaPredicted RBP21.2■□□□□ 0.98
PTPRS-204ENST00000587303 ERICH6Q7L0X2 663 aa21.16■□□□□ 0.98
PTPRS-204ENST00000587303 PCGF6Q9BYE7 350 aa20.87■□□□□ 0.93
PTPRS-204ENST00000587303 CCER1Q8TC90 406 aaPredicted RBP20.71■□□□□ 0.91
PTPRS-204ENST00000587303 MYT1LQ9UL68 1186 aa20.7■□□□□ 0.9
PTPRS-204ENST00000587303 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
PTPRS-204ENST00000587303 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
PTPRS-204ENST00000587303 MYT1Q01538 1121 aa20.61■□□□□ 0.89
PTPRS-204ENST00000587303 YTHDC1Q96MU7 727 aaKnown RBP20.57■□□□□ 0.88
PTPRS-204ENST00000587303 PPARGC1BQ86YN6 1023 aaKnown RBP20.52■□□□□ 0.87
PTPRS-204ENST00000587303 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
PTPRS-204ENST00000587303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.48■□□□□ 0.87
PTPRS-204ENST00000587303 HNRNPUL2Q1KMD3 747 aaKnown RBP20.48■□□□□ 0.87
PTPRS-204ENST00000587303 NEFLP07196 543 aa20.38■□□□□ 0.85
PTPRS-204ENST00000587303 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
PTPRS-204ENST00000587303 POLR3GLQ9BT43 218 aa20.28■□□□□ 0.84
PTPRS-204ENST00000587303 CNGB1Q14028 1251 aaPredicted RBP20.27■□□□□ 0.83
PTPRS-204ENST00000587303 ZEB1P37275 1124 aaPredicted RBP20.19■□□□□ 0.82
PTPRS-204ENST00000587303 ITGAEP38570 1179 aa20.15■□□□□ 0.82
PTPRS-204ENST00000587303 DAXXQ9UER7 740 aaPredicted RBP20.14■□□□□ 0.81
PTPRS-204ENST00000587303 SLC4A1APQ9BWU0 796 aaKnown RBP20.1■□□□□ 0.81
PTPRS-204ENST00000587303 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
PTPRS-204ENST00000587303 CLSPNQ9HAW4 1339 aa19.7■□□□□ 0.74
PTPRS-204ENST00000587303 FBLN2P98095 1184 aa19.65■□□□□ 0.74
PTPRS-204ENST00000587303 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.74
PTPRS-204ENST00000587303 TRIM26Q12899 539 aaPredicted RBP19.63■□□□□ 0.73
PTPRS-204ENST00000587303 BCL11AQ9H165 835 aa19.62■□□□□ 0.73
PTPRS-204ENST00000587303 PABPN1Q86U42 306 aaKnown RBP eCLIP19.61■□□□□ 0.731e-6■■□□□ 13.3
PTPRS-204ENST00000587303 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
PTPRS-204ENST00000587303 TRIM52Q96A61 297 aa19.57■□□□□ 0.72
PTPRS-204ENST00000587303 BCANQ96GW7 911 aa19.56■□□□□ 0.72
PTPRS-204ENST00000587303 SLC24A1O60721 1099 aa19.52■□□□□ 0.72
PTPRS-204ENST00000587303 HRCP23327 699 aa19.48■□□□□ 0.71
PTPRS-204ENST00000587303 RTL5Q5HYW3 569 aaPredicted RBP19.46■□□□□ 0.71
PTPRS-204ENST00000587303 ABCC9O60706 1549 aa19.42■□□□□ 0.7
PTPRS-204ENST00000587303 ZNF326Q5BKZ1 582 aaKnown RBP19.4■□□□□ 0.7
PTPRS-204ENST00000587303 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
PTPRS-204ENST00000587303 ZBTB47Q9UFB7 747 aaPredicted RBP19.32■□□□□ 0.68
PTPRS-204ENST00000587303 NEUROD1Q13562 356 aa19.32■□□□□ 0.68
PTPRS-204ENST00000587303 ESF1Q9H501 851 aaKnown RBP19.28■□□□□ 0.68
PTPRS-204ENST00000587303 ARID3CA6NKF2 412 aa19.26■□□□□ 0.67
PTPRS-204ENST00000587303 NEFMP07197 916 aa19.19■□□□□ 0.66
PTPRS-204ENST00000587303 DIEXFQ68CQ4 756 aaKnown RBP19.12■□□□□ 0.65
PTPRS-204ENST00000587303 ZNF777Q9ULD5 760 aaPredicted RBP19.12■□□□□ 0.65
PTPRS-204ENST00000587303 CANXP27824 592 aaKnown RBP19.11■□□□□ 0.65
PTPRS-204ENST00000587303 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
PTPRS-204ENST00000587303 STAG3Q9UJ98 1225 aa19.1■□□□□ 0.65
PTPRS-204ENST00000587303 NPM1P06748 294 aaKnown RBP eCLIP19.03■□□□□ 0.64
PTPRS-204ENST00000587303 CHGAP10645 457 aaKnown RBP19.02■□□□□ 0.64
PTPRS-204ENST00000587303 ANP32CO43423 234 aa18.96■□□□□ 0.63
PTPRS-204ENST00000587303 CDK11AQ9UQ88 783 aaPredicted RBP18.9■□□□□ 0.62
PTPRS-204ENST00000587303 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
PTPRS-204ENST00000587303 NPM2Q86SE8 214 aaKnown RBP18.88■□□□□ 0.61
PTPRS-204ENST00000587303 A0A0G2JS52 829 aa18.84■□□□□ 0.61
PTPRS-204ENST00000587303 GTF3C3Q9Y5Q9 886 aa18.76■□□□□ 0.59
PTPRS-204ENST00000587303 EIF5BO60841 1220 aaKnown RBP18.73■□□□□ 0.59
PTPRS-204ENST00000587303 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.71■□□□□ 0.591e-6■□□□□ 9.8
PTPRS-204ENST00000587303 PLEKHG5O94827 1062 aa18.7■□□□□ 0.58
PTPRS-204ENST00000587303 ZBTB7CA1YPR0 619 aa18.65■□□□□ 0.58
PTPRS-204ENST00000587303 HSP90AA1P07900 732 aaKnown RBP18.65■□□□□ 0.58
PTPRS-204ENST00000587303 ARXQ96QS3 562 aa18.65■□□□□ 0.58
PTPRS-204ENST00000587303 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
PTPRS-204ENST00000587303 C14orf37Q86TY3 774 aa18.59■□□□□ 0.57
PTPRS-204ENST00000587303 ANP32AP39687 249 aaKnown RBP18.58■□□□□ 0.57
PTPRS-204ENST00000587303 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.57
PTPRS-204ENST00000587303 SALL2Q9Y467 1007 aaPredicted RBP18.57■□□□□ 0.56
PTPRS-204ENST00000587303 ANP32BQ92688 251 aaKnown RBP18.55■□□□□ 0.56
PTPRS-204ENST00000587303 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
PTPRS-204ENST00000587303 HAP1P54257 671 aaPredicted RBP18.52■□□□□ 0.55
PTPRS-204ENST00000587303 SCRIBQ14160 1630 aa18.52■□□□□ 0.55
PTPRS-204ENST00000587303 CHIC2Q9UKJ5 165 aa18.51■□□□□ 0.55
PTPRS-204ENST00000587303 ARID4BQ4LE39 1312 aaPredicted RBP18.5■□□□□ 0.55
PTPRS-204ENST00000587303 PPP1R15AO75807 674 aaPredicted RBP18.5■□□□□ 0.55
PTPRS-204ENST00000587303 TONSLQ96HA7 1378 aa18.47■□□□□ 0.55
PTPRS-204ENST00000587303 TSPY4P0CV99 314 aa18.46■□□□□ 0.55
PTPRS-204ENST00000587303 TSPY10P0CW01 314 aa18.46■□□□□ 0.55
PTPRS-204ENST00000587303 TULP1O00294 542 aaPredicted RBP18.45■□□□□ 0.54
PTPRS-204ENST00000587303 KDM2AQ9Y2K7 1162 aa18.44■□□□□ 0.54
PTPRS-204ENST00000587303 KCNH8Q96L42 1107 aa18.44■□□□□ 0.54
PTPRS-204ENST00000587303 FAM9BQ8IZU0 186 aa18.41■□□□□ 0.54
PTPRS-204ENST00000587303 UPF2Q9HAU5 1272 aaKnown RBP18.39■□□□□ 0.53
PTPRS-204ENST00000587303 CDK11BP21127 795 aaKnown RBP18.39■□□□□ 0.53
PTPRS-204ENST00000587303 WDR43Q15061 677 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTPRS-204ENST00000587303 NBR1Q14596 966 aa18.36■□□□□ 0.53
PTPRS-204ENST00000587303 FKBP8Q14318 412 aa18.34■□□□□ 0.53
PTPRS-204ENST00000587303 DDX10Q13206 875 aaKnown RBP18.33■□□□□ 0.53
PTPRS-204ENST00000587303 HIRIP3Q9BW71 556 aaPredicted RBP18.32■□□□□ 0.52
PTPRS-204ENST00000587303 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
PTPRS-204ENST00000587303 HNRNPUQ00839 825 aaKnown RBP eCLIP18.3■□□□□ 0.52
PTPRS-204ENST00000587303 TPRNQ4KMQ1 711 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms