RNA–Protein interactions for RNA: ENST00000444547.6

SMG7-206, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG7, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-206ENST00000444547 NISCHQ9Y2I1 1504 aa45.38■■■■■ 4.86
SMG7-206ENST00000444547 ABCC9O60706 1549 aa41.84■■■■■ 4.29
SMG7-206ENST00000444547 CCDC180Q9P1Z9 1646 aa40.98■■■■■ 4.15
SMG7-206ENST00000444547 DNAJC5BQ9UF47 199 aa39.85■■■■□ 3.97
SMG7-206ENST00000444547 RB1CC1Q8TDY2 1594 aa39.46■■■■□ 3.91
SMG7-206ENST00000444547 NACADO15069 1562 aa38.99■■■■□ 3.83
SMG7-206ENST00000444547 PABPN1Q86U42 306 aaKnown RBP eCLIP38.89■■■■□ 3.82
SMG7-206ENST00000444547 DCAF8L2P0C7V8 631 aa38.88■■■■□ 3.81
SMG7-206ENST00000444547 UNC13AQ9UPW8 1703 aa38.41■■■■□ 3.74
SMG7-206ENST00000444547 BICRAQ9NZM4 1560 aa38.23■■■■□ 3.71
SMG7-206ENST00000444547 MYO15BQ96JP2 1530 aa38.16■■■■□ 3.7
SMG7-206ENST00000444547 CECR2Q9BXF3 1484 aa37.77■■■■□ 3.64
SMG7-206ENST00000444547 SHROOM4Q9ULL8 1493 aa37.71■■■■□ 3.63
SMG7-206ENST00000444547 CC2D2AQ9P2K1 1620 aa37.69■■■■□ 3.62
SMG7-206ENST00000444547 EIF4G1Q04637 1599 aaKnown RBP37.42■■■■□ 3.58
SMG7-206ENST00000444547 ZCCHC6Q5VYS8 1495 aaKnown RBP37.42■■■■□ 3.58
SMG7-206ENST00000444547 DCAF1Q9Y4B6 1507 aa37.4■■■■□ 3.58
SMG7-206ENST00000444547 SCRIBQ14160 1630 aa37.37■■■■□ 3.57
SMG7-206ENST00000444547 DNAJC5Q9H3Z4 198 aa37.21■■■■□ 3.55
SMG7-206ENST00000444547 CUX2O14529 1486 aa36.34■■■■□ 3.41
SMG7-206ENST00000444547 ERCC6Q03468 1493 aa36.24■■■■□ 3.39
SMG7-206ENST00000444547 NCAPD3P42695 1498 aa36.01■■■■□ 3.36
SMG7-206ENST00000444547 ATAD2BQ9ULI0 1458 aa35.8■■■■□ 3.32
SMG7-206ENST00000444547 NESP48681 1621 aa35.68■■■■□ 3.3
SMG7-206ENST00000444547 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
SMG7-206ENST00000444547 HMGXB3Q12766 1538 aa35.64■■■■□ 3.3
SMG7-206ENST00000444547 SMARCA4P51532 1647 aa35.54■■■■□ 3.28
SMG7-206ENST00000444547 BAZ1BQ9UIG0 1483 aaKnown RBP35.46■■■■□ 3.27
SMG7-206ENST00000444547 THOC2Q8NI27 1593 aaKnown RBP35.4■■■■□ 3.26
SMG7-206ENST00000444547 TRIM41Q8WV44 630 aa35.38■■■■□ 3.25
SMG7-206ENST00000444547 LAMC3Q9Y6N6 1575 aa35.31■■■■□ 3.24
SMG7-206ENST00000444547 BAZ1AQ9NRL2 1556 aaPredicted RBP35.3■■■■□ 3.24
SMG7-206ENST00000444547 PDS5BQ9NTI5 1447 aa35.23■■■■□ 3.23
SMG7-206ENST00000444547 PEG3Q9GZU2 1588 aa35.16■■■■□ 3.22
SMG7-206ENST00000444547 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
SMG7-206ENST00000444547 MROH2BQ7Z745 1585 aa34.95■■■■□ 3.18
SMG7-206ENST00000444547 CADPSQ9ULU8 1353 aa34.93■■■■□ 3.18
SMG7-206ENST00000444547 MRC2Q9UBG0 1479 aa34.9■■■■□ 3.18
SMG7-206ENST00000444547 WDR62O43379 1518 aa34.8■■■■□ 3.16
SMG7-206ENST00000444547 OSCARQ8IYS5 282 aa34.66■■■■□ 3.14
SMG7-206ENST00000444547 CEP164Q9UPV0 1460 aa34.65■■■■□ 3.14
SMG7-206ENST00000444547 FANCD2Q9BXW9 1451 aa34.52■■■■□ 3.12
SMG7-206ENST00000444547 WIZO95785 1651 aa34.47■■■■□ 3.11
SMG7-206ENST00000444547 CFTRP13569 1480 aa34.33■■■■□ 3.09
SMG7-206ENST00000444547 URB2Q14146 1524 aaKnown RBP34.23■■■■□ 3.07
SMG7-206ENST00000444547 RIMBP3CA6NJZ7 1639 aa34.15■■■■□ 3.06
SMG7-206ENST00000444547 RIMBP3BA6NNM3 1639 aa34.15■■■■□ 3.06
SMG7-206ENST00000444547 RIMBP3Q9UFD9 1639 aa34.15■■■■□ 3.06
SMG7-206ENST00000444547 TOP2AP11388 1531 aaKnown RBP34.01■■■■□ 3.04
SMG7-206ENST00000444547 ARHGEF11O15085 1522 aa33.99■■■■□ 3.03
SMG7-206ENST00000444547 RSF1Q96T23 1441 aaPredicted RBP33.98■■■■□ 3.03
SMG7-206ENST00000444547 IFT140Q96RY7 1462 aa33.97■■■■□ 3.03
SMG7-206ENST00000444547 ZNF608Q9ULD9 1512 aaPredicted RBP33.95■■■■□ 3.03
SMG7-206ENST00000444547 CYB5RLQ6IPT4 315 aa33.92■■■■□ 3.02
SMG7-206ENST00000444547 TRHP20396 242 aaPredicted RBP33.85■■■■□ 3.01
SMG7-206ENST00000444547 PRDM2Q13029 1718 aa33.82■■■■□ 3
SMG7-206ENST00000444547 TOPBP1Q92547 1522 aa33.75■■■□□ 2.99
SMG7-206ENST00000444547 EIF4G3O43432 1585 aaKnown RBP33.7■■■□□ 2.99
SMG7-206ENST00000444547 ABCC8Q09428 1581 aa33.68■■■□□ 2.98
SMG7-206ENST00000444547 FBLN2P98095 1184 aa33.67■■■□□ 2.98
SMG7-206ENST00000444547 CCDC88BA6NC98 1476 aa33.66■■■□□ 2.98
SMG7-206ENST00000444547 AQRO60306 1485 aaKnown RBP eCLIP33.6■■■□□ 2.971e-6■■■■■ 35
SMG7-206ENST00000444547 ARAP1Q96P48 1450 aa33.6■■■□□ 2.97
SMG7-206ENST00000444547 CHD1O14646 1710 aa33.56■■■□□ 2.96
SMG7-206ENST00000444547 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
SMG7-206ENST00000444547 AEBP2Q6ZN18 517 aaPredicted RBP33.45■■■□□ 2.95
SMG7-206ENST00000444547 TARBP1Q13395 1621 aaKnown RBP33.45■■■□□ 2.95
SMG7-206ENST00000444547 POLA1P09884 1462 aaPredicted RBP33.37■■■□□ 2.93
SMG7-206ENST00000444547 TDRD9Q8NDG6 1382 aaKnown RBP33.3■■■□□ 2.92
SMG7-206ENST00000444547 RAD54L2Q9Y4B4 1467 aa33.28■■■□□ 2.92
SMG7-206ENST00000444547 CHMP7Q8WUX9 453 aaPredicted RBP33.27■■■□□ 2.92
SMG7-206ENST00000444547 SOGA1O94964 1423 aa33.27■■■□□ 2.92
SMG7-206ENST00000444547 SNAPC4Q5SXM2 1469 aa33.22■■■□□ 2.91
SMG7-206ENST00000444547 CLASP1Q7Z460 1538 aa33.17■■■□□ 2.9
SMG7-206ENST00000444547 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
SMG7-206ENST00000444547 MAGI1Q96QZ7 1491 aaPredicted RBP33.1■■■□□ 2.89
SMG7-206ENST00000444547 WDR97A6NE52 1622 aa33.1■■■□□ 2.89
SMG7-206ENST00000444547 FGD5Q6ZNL6 1462 aa33.06■■■□□ 2.88
SMG7-206ENST00000444547 GRIN2BQ13224 1484 aa33.04■■■□□ 2.88
SMG7-206ENST00000444547 SYNJ2O15056 1496 aa33■■■□□ 2.87
SMG7-206ENST00000444547 GAPVD1Q14C86 1478 aa32.96■■■□□ 2.87
SMG7-206ENST00000444547 CUX1P39880 1505 aa32.87■■■□□ 2.85
SMG7-206ENST00000444547 PBRM1Q86U86 1689 aa32.76■■■□□ 2.84
SMG7-206ENST00000444547 ABCA10Q8WWZ4 1543 aa32.63■■■□□ 2.81
SMG7-206ENST00000444547 ERCC6L2Q5T890 1561 aa32.6■■■□□ 2.81
SMG7-206ENST00000444547 ABCA5Q8WWZ7 1642 aa32.59■■■□□ 2.81
SMG7-206ENST00000444547 GRIN2AQ12879 1464 aa32.59■■■□□ 2.81
SMG7-206ENST00000444547 CEP170Q5SW79 1584 aa32.53■■■□□ 2.8
SMG7-206ENST00000444547 NUP160Q12769 1436 aa32.49■■■□□ 2.79
SMG7-206ENST00000444547 WRNQ14191 1432 aaPredicted RBP eCLIP32.43■■■□□ 2.78
SMG7-206ENST00000444547 ADAMTS12P58397 1594 aa32.43■■■□□ 2.78
SMG7-206ENST00000444547 FHAD1B1AJZ9 1412 aa32.38■■■□□ 2.77
SMG7-206ENST00000444547 SHROOM2Q13796 1616 aa32.36■■■□□ 2.77
SMG7-206ENST00000444547 KIF13AQ9H1H9 1805 aa32.33■■■□□ 2.77
SMG7-206ENST00000444547 NPM1P06748 294 aaKnown RBP eCLIP32.3■■■□□ 2.76
SMG7-206ENST00000444547 FAM69CQ0P6D2 419 aa32.3■■■□□ 2.76
SMG7-206ENST00000444547 PRG4Q92954 1404 aaPredicted RBP32.3■■■□□ 2.76
SMG7-206ENST00000444547 JPH4Q96JJ6 628 aa32.25■■■□□ 2.75
SMG7-206ENST00000444547 ERICH3Q5RHP9 1530 aa32.21■■■□□ 2.75
SMG7-206ENST00000444547 ABCC10Q5T3U5 1492 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms