RNA–Protein interactions for RNA: ENST00000381483.6

GREB1-203, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 2,347 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-203ENST00000381483 NISCHQ9Y2I1 1504 aa20.01■□□□□ 0.79
GREB1-203ENST00000381483 SHROOM4Q9ULL8 1493 aa17.27■□□□□ 0.36
GREB1-203ENST00000381483 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
GREB1-203ENST00000381483 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
GREB1-203ENST00000381483 CCDC180Q9P1Z9 1646 aa16.98■□□□□ 0.31
GREB1-203ENST00000381483 HRCP23327 699 aa16.9■□□□□ 0.3
GREB1-203ENST00000381483 CHIC1Q5VXU3 224 aa16.82■□□□□ 0.28
GREB1-203ENST00000381483 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
GREB1-203ENST00000381483 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
GREB1-203ENST00000381483 DCAF1Q9Y4B6 1507 aa16.51■□□□□ 0.23
GREB1-203ENST00000381483 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
GREB1-203ENST00000381483 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
GREB1-203ENST00000381483 LOC105371045A0A1W2PR82 267 aa16.32■□□□□ 0.2
GREB1-203ENST00000381483 TRIM26Q12899 539 aaPredicted RBP16.29■□□□□ 0.2
GREB1-203ENST00000381483 ZEB1P37275 1124 aaPredicted RBP16.12■□□□□ 0.17
GREB1-203ENST00000381483 ABCC9O60706 1549 aa16.08■□□□□ 0.17
GREB1-203ENST00000381483 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
GREB1-203ENST00000381483 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
GREB1-203ENST00000381483 PELP1Q8IZL8 1130 aaKnown RBP15.94■□□□□ 0.14
GREB1-203ENST00000381483 RB1CC1Q8TDY2 1594 aa15.85■□□□□ 0.13
GREB1-203ENST00000381483 SCRIBQ14160 1630 aa15.83■□□□□ 0.12
GREB1-203ENST00000381483 FAM9AQ8IZU1 332 aaPredicted RBP15.79■□□□□ 0.12
GREB1-203ENST00000381483 SCAF1Q9H7N4 1312 aaKnown RBP15.76■□□□□ 0.11
GREB1-203ENST00000381483 NACADO15069 1562 aa15.73■□□□□ 0.11
GREB1-203ENST00000381483 EHMT2Q96KQ7 1210 aa15.62■□□□□ 0.09
GREB1-203ENST00000381483 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
GREB1-203ENST00000381483 MROH2BQ7Z745 1585 aa15.56■□□□□ 0.08
GREB1-203ENST00000381483 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
GREB1-203ENST00000381483 ACIN1Q9UKV3 1341 aaKnown RBP15.52■□□□□ 0.08
GREB1-203ENST00000381483 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.07
GREB1-203ENST00000381483 WIZO95785 1651 aa15.48■□□□□ 0.07
GREB1-203ENST00000381483 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
GREB1-203ENST00000381483 BAZ1AQ9NRL2 1556 aaPredicted RBP15.44■□□□□ 0.06
GREB1-203ENST00000381483 EIF4G1Q04637 1599 aaKnown RBP15.42■□□□□ 0.06
GREB1-203ENST00000381483 DIEXFQ68CQ4 756 aaKnown RBP15.42■□□□□ 0.06
GREB1-203ENST00000381483 CENPBP07199 599 aaPredicted RBP15.42■□□□□ 0.06
GREB1-203ENST00000381483 WRNQ14191 1432 aaPredicted RBP eCLIP15.41■□□□□ 0.06
GREB1-203ENST00000381483 GTF3C3Q9Y5Q9 886 aa15.34■□□□□ 0.05
GREB1-203ENST00000381483 UNC13AQ9UPW8 1703 aa15.32■□□□□ 0.04
GREB1-203ENST00000381483 CEP162Q5TB80 1403 aa15.3■□□□□ 0.04
GREB1-203ENST00000381483 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
GREB1-203ENST00000381483 CCDC88BA6NC98 1476 aa15.27■□□□□ 0.04
GREB1-203ENST00000381483 TOP2AP11388 1531 aaKnown RBP15.27■□□□□ 0.03
GREB1-203ENST00000381483 MYT1Q01538 1121 aa15.26■□□□□ 0.03
GREB1-203ENST00000381483 ABCC8Q09428 1581 aa15.25■□□□□ 0.03
GREB1-203ENST00000381483 EEA1Q15075 1411 aa15.24■□□□□ 0.03
GREB1-203ENST00000381483 ZNF316A6NFI3 1004 aaPredicted RBP15.22■□□□□ 0.03
GREB1-203ENST00000381483 TTBK1Q5TCY1 1321 aaPredicted RBP15.22■□□□□ 0.03
GREB1-203ENST00000381483 SOGA1O94964 1423 aa15.2■□□□□ 0.02
GREB1-203ENST00000381483 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
GREB1-203ENST00000381483 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
GREB1-203ENST00000381483 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
GREB1-203ENST00000381483 UBTFP17480 764 aaKnown RBP15.14■□□□□ 0.01
GREB1-203ENST00000381483 GOLGA3Q08378 1498 aa15.12■□□□□ 0.01
GREB1-203ENST00000381483 BICRAQ9NZM4 1560 aa15.1■□□□□ 0.01
GREB1-203ENST00000381483 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
GREB1-203ENST00000381483 YTHDC1Q96MU7 727 aaKnown RBP15.04■□□□□ -0
GREB1-203ENST00000381483 MIER1Q8N108 512 aa15.03■□□□□ -0
GREB1-203ENST00000381483 PABPN1Q86U42 306 aaKnown RBP eCLIP15□□□□□ -0.01
GREB1-203ENST00000381483 CEP164Q9UPV0 1460 aa15□□□□□ -0.01
GREB1-203ENST00000381483 HNRNPUL2Q1KMD3 747 aaKnown RBP14.99□□□□□ -0.01
GREB1-203ENST00000381483 KIF21BO75037 1637 aa14.97□□□□□ -0.01
GREB1-203ENST00000381483 CLIP1P30622 1438 aa14.96□□□□□ -0.02
GREB1-203ENST00000381483 VPS8Q8N3P4 1428 aa14.94□□□□□ -0.02
GREB1-203ENST00000381483 APLP2Q06481 763 aa14.92□□□□□ -0.02
GREB1-203ENST00000381483 BAZ1BQ9UIG0 1483 aaKnown RBP14.9□□□□□ -0.02
GREB1-203ENST00000381483 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
GREB1-203ENST00000381483 AEBP2Q6ZN18 517 aaPredicted RBP14.87□□□□□ -0.03
GREB1-203ENST00000381483 CLSPNQ9HAW4 1339 aa14.87□□□□□ -0.03
GREB1-203ENST00000381483 PEG3Q9GZU2 1588 aa14.86□□□□□ -0.03
GREB1-203ENST00000381483 RAPGEF2Q9Y4G8 1499 aa14.81□□□□□ -0.04
GREB1-203ENST00000381483 DHX57Q6P158 1386 aaKnown RBP14.76□□□□□ -0.05
GREB1-203ENST00000381483 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
GREB1-203ENST00000381483 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.05
GREB1-203ENST00000381483 SUPT16HQ9Y5B9 1047 aaKnown RBP14.7□□□□□ -0.06
GREB1-203ENST00000381483 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
GREB1-203ENST00000381483 ERICH3Q5RHP9 1530 aa14.69□□□□□ -0.06
GREB1-203ENST00000381483 ARAP1Q96P48 1450 aa14.66□□□□□ -0.06
GREB1-203ENST00000381483 PRXQ9BXM0 1461 aa14.65□□□□□ -0.06
GREB1-203ENST00000381483 RRBP1Q9P2E9 1410 aaKnown RBP14.65□□□□□ -0.06
GREB1-203ENST00000381483 KANK4Q5T7N3 995 aaPredicted RBP14.63□□□□□ -0.07
GREB1-203ENST00000381483 CUX2O14529 1486 aa14.63□□□□□ -0.07
GREB1-203ENST00000381483 BIVM-ERCC5R4GMW8 1640 aa14.62□□□□□ -0.07
GREB1-203ENST00000381483 CCNB3Q8WWL7 1395 aa14.57□□□□□ -0.08
GREB1-203ENST00000381483 TSHZ2Q9NRE2 1034 aa14.54□□□□□ -0.08
GREB1-203ENST00000381483 HMGXB3Q12766 1538 aa14.53□□□□□ -0.08
GREB1-203ENST00000381483 KIF27Q86VH2 1401 aa14.52□□□□□ -0.09
GREB1-203ENST00000381483 NCAPD3P42695 1498 aa14.51□□□□□ -0.09
GREB1-203ENST00000381483 ARHGAP35Q9NRY4 1499 aa14.48□□□□□ -0.09
GREB1-203ENST00000381483 RAB3GAP2Q9H2M9 1393 aa14.47□□□□□ -0.09
GREB1-203ENST00000381483 CUX1P39880 1505 aa14.46□□□□□ -0.09
GREB1-203ENST00000381483 ITGAEP38570 1179 aa14.46□□□□□ -0.1
GREB1-203ENST00000381483 ANP32EQ9BTT0 268 aa14.46□□□□□ -0.1
GREB1-203ENST00000381483 MAPKBP1O60336 1514 aa14.45□□□□□ -0.1
GREB1-203ENST00000381483 KCNH8Q96L42 1107 aa14.44□□□□□ -0.1
GREB1-203ENST00000381483 MAP3K1Q13233 1512 aa14.43□□□□□ -0.1
GREB1-203ENST00000381483 SETD5Q9C0A6 1442 aa14.41□□□□□ -0.1
GREB1-203ENST00000381483 TIAM1Q13009 1591 aa14.38□□□□□ -0.11
GREB1-203ENST00000381483 TIMELESSQ9UNS1 1208 aa14.38□□□□□ -0.11
GREB1-203ENST00000381483 DDX10Q13206 875 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms