RNA–Protein interactions for RNA: ENST00000518618.2

ARFGAP1-207, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,244 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-207ENST00000518618 NISCHQ9Y2I1 1504 aa44.24■■■■■ 4.67
ARFGAP1-207ENST00000518618 CCDC180Q9P1Z9 1646 aa39.54■■■■□ 3.92
ARFGAP1-207ENST00000518618 ABCC9O60706 1549 aa38.89■■■■□ 3.82
ARFGAP1-207ENST00000518618 RB1CC1Q8TDY2 1594 aa37.32■■■■□ 3.56
ARFGAP1-207ENST00000518618 NACADO15069 1562 aa37.21■■■■□ 3.55
ARFGAP1-207ENST00000518618 MYO15BQ96JP2 1530 aa36.91■■■■□ 3.5
ARFGAP1-207ENST00000518618 DCAF8L2P0C7V8 631 aa36.89■■■■□ 3.5
ARFGAP1-207ENST00000518618 ZCCHC6Q5VYS8 1495 aaKnown RBP36.82■■■■□ 3.48
ARFGAP1-207ENST00000518618 DCAF1Q9Y4B6 1507 aa36.64■■■■□ 3.46
ARFGAP1-207ENST00000518618 UNC13AQ9UPW8 1703 aa36.53■■■■□ 3.44
ARFGAP1-207ENST00000518618 BICRAQ9NZM4 1560 aa36.23■■■■□ 3.39
ARFGAP1-207ENST00000518618 PABPN1Q86U42 306 aaKnown RBP eCLIP36.21■■■■□ 3.396e-14■■■□□ 16.2
ARFGAP1-207ENST00000518618 SCRIBQ14160 1630 aa35.98■■■■□ 3.35
ARFGAP1-207ENST00000518618 DNAJC5BQ9UF47 199 aa35.95■■■■□ 3.35
ARFGAP1-207ENST00000518618 SHROOM4Q9ULL8 1493 aa35.85■■■■□ 3.33
ARFGAP1-207ENST00000518618 EIF4G1Q04637 1599 aaKnown RBP35.29■■■■□ 3.24
ARFGAP1-207ENST00000518618 CC2D2AQ9P2K1 1620 aa35.21■■■■□ 3.23
ARFGAP1-207ENST00000518618 CECR2Q9BXF3 1484 aa34.99■■■■□ 3.19
ARFGAP1-207ENST00000518618 SMARCA4P51532 1647 aa34.42■■■■□ 3.1
ARFGAP1-207ENST00000518618 NCAPD3P42695 1498 aa34.33■■■■□ 3.09
ARFGAP1-207ENST00000518618 BAZ1AQ9NRL2 1556 aaPredicted RBP34.32■■■■□ 3.08
ARFGAP1-207ENST00000518618 ATAD2BQ9ULI0 1458 aa34.28■■■■□ 3.08
ARFGAP1-207ENST00000518618 SMARCA2P51531 1590 aa34.24■■■■□ 3.07
ARFGAP1-207ENST00000518618 HMGXB3Q12766 1538 aa34.16■■■■□ 3.06
ARFGAP1-207ENST00000518618 PEG3Q9GZU2 1588 aa34.12■■■■□ 3.05
ARFGAP1-207ENST00000518618 MROH2BQ7Z745 1585 aa34.08■■■■□ 3.05
ARFGAP1-207ENST00000518618 BAZ1BQ9UIG0 1483 aaKnown RBP33.97■■■■□ 3.03
ARFGAP1-207ENST00000518618 WIZO95785 1651 aa33.7■■■□□ 2.99
ARFGAP1-207ENST00000518618 NESP48681 1621 aa33.57■■■□□ 2.97
ARFGAP1-207ENST00000518618 RSF1Q96T23 1441 aaPredicted RBP33.55■■■□□ 2.96
ARFGAP1-207ENST00000518618 ERCC6Q03468 1493 aa33.53■■■□□ 2.96
ARFGAP1-207ENST00000518618 LAMC3Q9Y6N6 1575 aa33.49■■■□□ 2.95
ARFGAP1-207ENST00000518618 CUX2O14529 1486 aa33.35■■■□□ 2.93
ARFGAP1-207ENST00000518618 TOP2AP11388 1531 aaKnown RBP33.34■■■□□ 2.93
ARFGAP1-207ENST00000518618 CADPSQ9ULU8 1353 aa33.26■■■□□ 2.92
ARFGAP1-207ENST00000518618 KIF21AQ7Z4S6 1674 aa33.22■■■□□ 2.91
ARFGAP1-207ENST00000518618 THOC2Q8NI27 1593 aaKnown RBP33.21■■■□□ 2.91
ARFGAP1-207ENST00000518618 PDS5BQ9NTI5 1447 aa33.21■■■□□ 2.91
ARFGAP1-207ENST00000518618 CFTRP13569 1480 aa33.04■■■□□ 2.88
ARFGAP1-207ENST00000518618 MRC2Q9UBG0 1479 aa32.93■■■□□ 2.86
ARFGAP1-207ENST00000518618 CCDC88BA6NC98 1476 aa32.91■■■□□ 2.86
ARFGAP1-207ENST00000518618 FANCD2Q9BXW9 1451 aa32.9■■■□□ 2.86
ARFGAP1-207ENST00000518618 CEP164Q9UPV0 1460 aa32.9■■■□□ 2.86
ARFGAP1-207ENST00000518618 WDR62O43379 1518 aa32.87■■■□□ 2.85
ARFGAP1-207ENST00000518618 PRDM2Q13029 1718 aa32.85■■■□□ 2.85
ARFGAP1-207ENST00000518618 DNAJC5Q9H3Z4 198 aa32.63■■■□□ 2.81
ARFGAP1-207ENST00000518618 URB2Q14146 1524 aaKnown RBP32.61■■■□□ 2.81
ARFGAP1-207ENST00000518618 TOPBP1Q92547 1522 aa32.36■■■□□ 2.77
ARFGAP1-207ENST00000518618 SUPT5HO00267 1087 aaKnown RBP32.33■■■□□ 2.77
ARFGAP1-207ENST00000518618 ABCC8Q09428 1581 aa32.32■■■□□ 2.77
ARFGAP1-207ENST00000518618 DNMBPQ6XZF7 1577 aa32.31■■■□□ 2.76
ARFGAP1-207ENST00000518618 IFT140Q96RY7 1462 aa32.22■■■□□ 2.75
ARFGAP1-207ENST00000518618 ZNF608Q9ULD9 1512 aaPredicted RBP32.1■■■□□ 2.73
ARFGAP1-207ENST00000518618 TARBP1Q13395 1621 aaKnown RBP32.07■■■□□ 2.72
ARFGAP1-207ENST00000518618 POLA1P09884 1462 aaPredicted RBP32.06■■■□□ 2.72
ARFGAP1-207ENST00000518618 EIF4G3O43432 1585 aaKnown RBP32.01■■■□□ 2.71
ARFGAP1-207ENST00000518618 CUX1P39880 1505 aa32■■■□□ 2.71
ARFGAP1-207ENST00000518618 FGD5Q6ZNL6 1462 aa31.93■■■□□ 2.7
ARFGAP1-207ENST00000518618 RAD54L2Q9Y4B4 1467 aa31.89■■■□□ 2.7
ARFGAP1-207ENST00000518618 SOGA1O94964 1423 aa31.87■■■□□ 2.69
ARFGAP1-207ENST00000518618 AQRO60306 1485 aaKnown RBP eCLIP31.84■■■□□ 2.693e-7■■■□□ 14.6
ARFGAP1-207ENST00000518618 WDR97A6NE52 1622 aa31.82■■■□□ 2.68
ARFGAP1-207ENST00000518618 OSCARQ8IYS5 282 aa31.8■■■□□ 2.68
ARFGAP1-207ENST00000518618 TDRD9Q8NDG6 1382 aaKnown RBP31.71■■■□□ 2.67
ARFGAP1-207ENST00000518618 BIVM-ERCC5R4GMW8 1640 aa31.67■■■□□ 2.66
ARFGAP1-207ENST00000518618 CHD1O14646 1710 aa31.66■■■□□ 2.66
ARFGAP1-207ENST00000518618 TOP2BQ02880 1626 aa31.65■■■□□ 2.66
ARFGAP1-207ENST00000518618 WRNQ14191 1432 aaPredicted RBP eCLIP31.64■■■□□ 2.66
ARFGAP1-207ENST00000518618 SYNJ1O43426 1573 aa31.62■■■□□ 2.65
ARFGAP1-207ENST00000518618 ABCA10Q8WWZ4 1543 aa31.62■■■□□ 2.65
ARFGAP1-207ENST00000518618 SNAPC4Q5SXM2 1469 aa31.58■■■□□ 2.65
ARFGAP1-207ENST00000518618 GRIN2BQ13224 1484 aa31.57■■■□□ 2.64
ARFGAP1-207ENST00000518618 ABCA5Q8WWZ7 1642 aa31.57■■■□□ 2.64
ARFGAP1-207ENST00000518618 PBRM1Q86U86 1689 aa31.54■■■□□ 2.64
ARFGAP1-207ENST00000518618 MAGI1Q96QZ7 1491 aaPredicted RBP31.54■■■□□ 2.64
ARFGAP1-207ENST00000518618 GAPVD1Q14C86 1478 aa31.52■■■□□ 2.64
ARFGAP1-207ENST00000518618 RIMBP3CA6NJZ7 1639 aa31.44■■■□□ 2.62
ARFGAP1-207ENST00000518618 RIMBP3BA6NNM3 1639 aa31.44■■■□□ 2.62
ARFGAP1-207ENST00000518618 RIMBP3Q9UFD9 1639 aa31.44■■■□□ 2.62
ARFGAP1-207ENST00000518618 FBLN2P98095 1184 aa31.43■■■□□ 2.62
ARFGAP1-207ENST00000518618 SYNJ2O15056 1496 aa31.41■■■□□ 2.62
ARFGAP1-207ENST00000518618 ARHGEF11O15085 1522 aa31.39■■■□□ 2.62
ARFGAP1-207ENST00000518618 TRIM41Q8WV44 630 aa31.36■■■□□ 2.61
ARFGAP1-207ENST00000518618 CLASP1Q7Z460 1538 aa31.33■■■□□ 2.61
ARFGAP1-207ENST00000518618 CHMP7Q8WUX9 453 aaPredicted RBP31.32■■■□□ 2.6
ARFGAP1-207ENST00000518618 ADAMTS12P58397 1594 aa31.28■■■□□ 2.6
ARFGAP1-207ENST00000518618 ERICH3Q5RHP9 1530 aa31.24■■■□□ 2.59
ARFGAP1-207ENST00000518618 GRIN2AQ12879 1464 aa31.19■■■□□ 2.58
ARFGAP1-207ENST00000518618 FHAD1B1AJZ9 1412 aa31.15■■■□□ 2.58
ARFGAP1-207ENST00000518618 ARAP1Q96P48 1450 aa31.12■■■□□ 2.57
ARFGAP1-207ENST00000518618 NUP160Q12769 1436 aa31.07■■■□□ 2.57
ARFGAP1-207ENST00000518618 CEP170Q5SW79 1584 aa31.06■■■□□ 2.56
ARFGAP1-207ENST00000518618 CYB5RLQ6IPT4 315 aa31■■■□□ 2.55
ARFGAP1-207ENST00000518618 KIF27Q86VH2 1401 aa30.99■■■□□ 2.55
ARFGAP1-207ENST00000518618 SHROOM2Q13796 1616 aa30.91■■■□□ 2.54
ARFGAP1-207ENST00000518618 CUL7Q14999 1698 aa30.91■■■□□ 2.54
ARFGAP1-207ENST00000518618 IGF1RP08069 1367 aa30.9■■■□□ 2.54
ARFGAP1-207ENST00000518618 ERCC6L2Q5T890 1561 aa30.83■■■□□ 2.53
ARFGAP1-207ENST00000518618 RUSC2Q8N2Y8 1516 aa30.83■■■□□ 2.53
ARFGAP1-207ENST00000518618 CARMIL1Q5VZK9 1371 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms