RNA–Protein interactions for RNA: ENST00000502375.1

SMG7-210, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG7, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-210ENST00000502375 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
SMG7-210ENST00000502375 CCDC180Q9P1Z9 1646 aa31.85■■■□□ 2.69
SMG7-210ENST00000502375 ABCC9O60706 1549 aa30.85■■■□□ 2.53
SMG7-210ENST00000502375 ZCCHC6Q5VYS8 1495 aaKnown RBP29.98■■■□□ 2.39
SMG7-210ENST00000502375 DCAF8L2P0C7V8 631 aa29.95■■■□□ 2.39
SMG7-210ENST00000502375 NACADO15069 1562 aa29.92■■■□□ 2.38
SMG7-210ENST00000502375 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
SMG7-210ENST00000502375 MYO15BQ96JP2 1530 aa29.86■■■□□ 2.37
SMG7-210ENST00000502375 DCAF1Q9Y4B6 1507 aa29.8■■■□□ 2.36
SMG7-210ENST00000502375 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
SMG7-210ENST00000502375 UNC13AQ9UPW8 1703 aa29.01■■■□□ 2.23
SMG7-210ENST00000502375 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
SMG7-210ENST00000502375 BICRAQ9NZM4 1560 aa28.81■■■□□ 2.2
SMG7-210ENST00000502375 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
SMG7-210ENST00000502375 EIF4G1Q04637 1599 aaKnown RBP28.12■■■□□ 2.09
SMG7-210ENST00000502375 DNAJC5BQ9UF47 199 aa27.96■■■□□ 2.07
SMG7-210ENST00000502375 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
SMG7-210ENST00000502375 BAZ1AQ9NRL2 1556 aaPredicted RBP27.89■■■□□ 2.05
SMG7-210ENST00000502375 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
SMG7-210ENST00000502375 SMARCA4P51532 1647 aa27.8■■■□□ 2.04
SMG7-210ENST00000502375 SMARCA2P51531 1590 aa27.65■■■□□ 2.02
SMG7-210ENST00000502375 MROH2BQ7Z745 1585 aa27.63■■■□□ 2.01
SMG7-210ENST00000502375 ATAD2BQ9ULI0 1458 aa27.61■■■□□ 2.01
SMG7-210ENST00000502375 NCAPD3P42695 1498 aa27.58■■■□□ 2.01
SMG7-210ENST00000502375 PEG3Q9GZU2 1588 aa27.55■■■□□ 2
SMG7-210ENST00000502375 HMGXB3Q12766 1538 aa27.47■■□□□ 1.99
SMG7-210ENST00000502375 RSF1Q96T23 1441 aaPredicted RBP27.45■■□□□ 1.98
SMG7-210ENST00000502375 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
SMG7-210ENST00000502375 WIZO95785 1651 aa27.33■■□□□ 1.97
SMG7-210ENST00000502375 TOP2AP11388 1531 aaKnown RBP27.15■■□□□ 1.94
SMG7-210ENST00000502375 SUPT5HO00267 1087 aaKnown RBP26.98■■□□□ 1.91
SMG7-210ENST00000502375 LAMC3Q9Y6N6 1575 aa26.83■■□□□ 1.89
SMG7-210ENST00000502375 CADPSQ9ULU8 1353 aa26.81■■□□□ 1.88
SMG7-210ENST00000502375 CCDC88BA6NC98 1476 aa26.79■■□□□ 1.88
SMG7-210ENST00000502375 NESP48681 1621 aa26.72■■□□□ 1.87
SMG7-210ENST00000502375 PDS5BQ9NTI5 1447 aa26.69■■□□□ 1.86
SMG7-210ENST00000502375 CFTRP13569 1480 aa26.68■■□□□ 1.86
SMG7-210ENST00000502375 ERCC6Q03468 1493 aa26.68■■□□□ 1.86
SMG7-210ENST00000502375 FANCD2Q9BXW9 1451 aa26.47■■□□□ 1.83
SMG7-210ENST00000502375 PRDM2Q13029 1718 aa26.45■■□□□ 1.83
SMG7-210ENST00000502375 CEP164Q9UPV0 1460 aa26.45■■□□□ 1.82
SMG7-210ENST00000502375 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
SMG7-210ENST00000502375 MRC2Q9UBG0 1479 aa26.34■■□□□ 1.81
SMG7-210ENST00000502375 CUX2O14529 1486 aa26.3■■□□□ 1.8
SMG7-210ENST00000502375 THOC2Q8NI27 1593 aaKnown RBP26.29■■□□□ 1.8
SMG7-210ENST00000502375 WDR62O43379 1518 aa26.22■■□□□ 1.79
SMG7-210ENST00000502375 ABCC8Q09428 1581 aa26.2■■□□□ 1.79
SMG7-210ENST00000502375 URB2Q14146 1524 aaKnown RBP26.13■■□□□ 1.77
SMG7-210ENST00000502375 DNMBPQ6XZF7 1577 aa26.07■■□□□ 1.76
SMG7-210ENST00000502375 TOPBP1Q92547 1522 aa26.06■■□□□ 1.76
SMG7-210ENST00000502375 WRNQ14191 1432 aaPredicted RBP eCLIP25.94■■□□□ 1.74
SMG7-210ENST00000502375 CUX1P39880 1505 aa25.91■■□□□ 1.74
SMG7-210ENST00000502375 IFT140Q96RY7 1462 aa25.91■■□□□ 1.74
SMG7-210ENST00000502375 POLA1P09884 1462 aaPredicted RBP25.85■■□□□ 1.73
SMG7-210ENST00000502375 FGD5Q6ZNL6 1462 aa25.83■■□□□ 1.73
SMG7-210ENST00000502375 TOP2BQ02880 1626 aa25.81■■□□□ 1.72
SMG7-210ENST00000502375 SOGA1O94964 1423 aa25.8■■□□□ 1.72
SMG7-210ENST00000502375 BIVM-ERCC5R4GMW8 1640 aa25.79■■□□□ 1.72
SMG7-210ENST00000502375 SYNJ1O43426 1573 aa25.75■■□□□ 1.71
SMG7-210ENST00000502375 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.71
SMG7-210ENST00000502375 RAD54L2Q9Y4B4 1467 aa25.69■■□□□ 1.7
SMG7-210ENST00000502375 WDR97A6NE52 1622 aa25.67■■□□□ 1.7
SMG7-210ENST00000502375 ABCA10Q8WWZ4 1543 aa25.63■■□□□ 1.69
SMG7-210ENST00000502375 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
SMG7-210ENST00000502375 EIF4G3O43432 1585 aaKnown RBP25.58■■□□□ 1.69
SMG7-210ENST00000502375 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
SMG7-210ENST00000502375 AQRO60306 1485 aaKnown RBP eCLIP25.55■■□□□ 1.683e-6■■■■□ 22.1
SMG7-210ENST00000502375 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
SMG7-210ENST00000502375 GAPVD1Q14C86 1478 aa25.5■■□□□ 1.67
SMG7-210ENST00000502375 GRIN2BQ13224 1484 aa25.48■■□□□ 1.67
SMG7-210ENST00000502375 ABCA5Q8WWZ7 1642 aa25.45■■□□□ 1.66
SMG7-210ENST00000502375 KIF27Q86VH2 1401 aa25.42■■□□□ 1.66
SMG7-210ENST00000502375 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
SMG7-210ENST00000502375 SNAPC4Q5SXM2 1469 aa25.36■■□□□ 1.65
SMG7-210ENST00000502375 PBRM1Q86U86 1689 aa25.36■■□□□ 1.65
SMG7-210ENST00000502375 ERICH3Q5RHP9 1530 aa25.35■■□□□ 1.65
SMG7-210ENST00000502375 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
SMG7-210ENST00000502375 CHMP7Q8WUX9 453 aaPredicted RBP25.29■■□□□ 1.64
SMG7-210ENST00000502375 FBLN2P98095 1184 aa25.28■■□□□ 1.64
SMG7-210ENST00000502375 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
SMG7-210ENST00000502375 OSCARQ8IYS5 282 aa25.27■■□□□ 1.64
SMG7-210ENST00000502375 FHAD1B1AJZ9 1412 aa25.24■■□□□ 1.63
SMG7-210ENST00000502375 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
SMG7-210ENST00000502375 IGF1RP08069 1367 aa25.19■■□□□ 1.62
SMG7-210ENST00000502375 EEA1Q15075 1411 aa25.17■■□□□ 1.62
SMG7-210ENST00000502375 CHD1O14646 1710 aa25.17■■□□□ 1.62
SMG7-210ENST00000502375 CUL7Q14999 1698 aa25.17■■□□□ 1.62
SMG7-210ENST00000502375 DNAJC5Q9H3Z4 198 aa25.12■■□□□ 1.61
SMG7-210ENST00000502375 GRIN2AQ12879 1464 aa25.12■■□□□ 1.61
SMG7-210ENST00000502375 CARMIL1Q5VZK9 1371 aa25.1■■□□□ 1.61
SMG7-210ENST00000502375 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
SMG7-210ENST00000502375 CSRNP3Q8WYN3 585 aa25.02■■□□□ 1.6
SMG7-210ENST00000502375 AEBP2Q6ZN18 517 aaPredicted RBP25.01■■□□□ 1.59
SMG7-210ENST00000502375 NUP160Q12769 1436 aa25■■□□□ 1.59
SMG7-210ENST00000502375 RAPGEF2Q9Y4G8 1499 aa25■■□□□ 1.59
SMG7-210ENST00000502375 CLASP1Q7Z460 1538 aa24.94■■□□□ 1.58
SMG7-210ENST00000502375 PRXQ9BXM0 1461 aa24.92■■□□□ 1.58
SMG7-210ENST00000502375 FAM9AQ8IZU1 332 aaPredicted RBP24.91■■□□□ 1.58
SMG7-210ENST00000502375 CEP170Q5SW79 1584 aa24.91■■□□□ 1.58
SMG7-210ENST00000502375 KIAA0586Q9BVV6 1533 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms