RNA–Protein interactions for RNA: ENST00000519604.5

ARFGAP1-212, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 3,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-212ENST00000519604 NISCHQ9Y2I1 1504 aa27.55■■■□□ 2
ARFGAP1-212ENST00000519604 PELP1Q8IZL8 1130 aaKnown RBP24.62■■□□□ 1.53
ARFGAP1-212ENST00000519604 MYT1Q01538 1121 aa24.1■■□□□ 1.45
ARFGAP1-212ENST00000519604 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
ARFGAP1-212ENST00000519604 HRCP23327 699 aa23.77■■□□□ 1.39
ARFGAP1-212ENST00000519604 CCDC180Q9P1Z9 1646 aa23.74■■□□□ 1.39
ARFGAP1-212ENST00000519604 SUPT5HO00267 1087 aaKnown RBP23.7■■□□□ 1.38
ARFGAP1-212ENST00000519604 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
ARFGAP1-212ENST00000519604 PCGF6Q9BYE7 350 aa23.46■■□□□ 1.35
ARFGAP1-212ENST00000519604 ZCCHC6Q5VYS8 1495 aaKnown RBP23.27■■□□□ 1.32
ARFGAP1-212ENST00000519604 MYO15BQ96JP2 1530 aa23.26■■□□□ 1.31
ARFGAP1-212ENST00000519604 DCAF8L2P0C7V8 631 aa23.19■■□□□ 1.3
ARFGAP1-212ENST00000519604 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
ARFGAP1-212ENST00000519604 PRKCSHP14314 528 aaPredicted RBP23.1■■□□□ 1.29
ARFGAP1-212ENST00000519604 TTBK1Q5TCY1 1321 aaPredicted RBP23.02■■□□□ 1.28
ARFGAP1-212ENST00000519604 SCAF1Q9H7N4 1312 aaKnown RBP22.86■■□□□ 1.25
ARFGAP1-212ENST00000519604 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
ARFGAP1-212ENST00000519604 LOC105371045A0A1W2PR82 267 aa22.75■■□□□ 1.23
ARFGAP1-212ENST00000519604 BCL11AQ9H165 835 aa22.64■■□□□ 1.22
ARFGAP1-212ENST00000519604 TRIM26Q12899 539 aaPredicted RBP22.54■■□□□ 1.2
ARFGAP1-212ENST00000519604 FAM9AQ8IZU1 332 aaPredicted RBP22.42■■□□□ 1.18
ARFGAP1-212ENST00000519604 ERICH6Q7L0X2 663 aa22.33■■□□□ 1.16
ARFGAP1-212ENST00000519604 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
ARFGAP1-212ENST00000519604 APLP2Q06481 763 aa22.17■■□□□ 1.14
ARFGAP1-212ENST00000519604 ABCC9O60706 1549 aa22.12■■□□□ 1.13
ARFGAP1-212ENST00000519604 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
ARFGAP1-212ENST00000519604 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
ARFGAP1-212ENST00000519604 NACADO15069 1562 aa21.95■■□□□ 1.1
ARFGAP1-212ENST00000519604 SLC24A1O60721 1099 aa21.95■■□□□ 1.1
ARFGAP1-212ENST00000519604 SCRIBQ14160 1630 aa21.95■■□□□ 1.1
ARFGAP1-212ENST00000519604 ACIN1Q9UKV3 1341 aaKnown RBP21.94■■□□□ 1.1
ARFGAP1-212ENST00000519604 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
ARFGAP1-212ENST00000519604 GTF3C3Q9Y5Q9 886 aa21.85■■□□□ 1.09
ARFGAP1-212ENST00000519604 TRIM41Q8WV44 630 aa21.79■■□□□ 1.08
ARFGAP1-212ENST00000519604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.77■■□□□ 1.08
ARFGAP1-212ENST00000519604 CCER1Q8TC90 406 aaPredicted RBP21.68■■□□□ 1.06
ARFGAP1-212ENST00000519604 DIEXFQ68CQ4 756 aaKnown RBP21.64■■□□□ 1.05
ARFGAP1-212ENST00000519604 RB1CC1Q8TDY2 1594 aa21.62■■□□□ 1.05
ARFGAP1-212ENST00000519604 RSF1Q96T23 1441 aaPredicted RBP21.62■■□□□ 1.05
ARFGAP1-212ENST00000519604 YTHDC1Q96MU7 727 aaKnown RBP21.47■■□□□ 1.03
ARFGAP1-212ENST00000519604 ANP32EQ9BTT0 268 aa21.42■■□□□ 1.02
ARFGAP1-212ENST00000519604 CECR2Q9BXF3 1484 aa21.39■■□□□ 1.01
ARFGAP1-212ENST00000519604 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
ARFGAP1-212ENST00000519604 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
ARFGAP1-212ENST00000519604 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
ARFGAP1-212ENST00000519604 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 12e-7■■■□□ 17.3
ARFGAP1-212ENST00000519604 BAZ1AQ9NRL2 1556 aaPredicted RBP21.22■□□□□ 0.99
ARFGAP1-212ENST00000519604 WIZO95785 1651 aa21.21■□□□□ 0.99
ARFGAP1-212ENST00000519604 EIF5BO60841 1220 aaKnown RBP21.18■□□□□ 0.98
ARFGAP1-212ENST00000519604 ZNF316A6NFI3 1004 aaPredicted RBP21.17■□□□□ 0.98
ARFGAP1-212ENST00000519604 ANO8Q9HCE9 1232 aaPredicted RBP21.17■□□□□ 0.98
ARFGAP1-212ENST00000519604 MIER1Q8N108 512 aa21.12■□□□□ 0.97
ARFGAP1-212ENST00000519604 SMARCA4P51532 1647 aa21.07■□□□□ 0.96
ARFGAP1-212ENST00000519604 DAXXQ9UER7 740 aaPredicted RBP21.02■□□□□ 0.96
ARFGAP1-212ENST00000519604 PLEKHG5O94827 1062 aa21.01■□□□□ 0.95
ARFGAP1-212ENST00000519604 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
ARFGAP1-212ENST00000519604 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
ARFGAP1-212ENST00000519604 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
ARFGAP1-212ENST00000519604 HNRNPUL2Q1KMD3 747 aaKnown RBP20.86■□□□□ 0.93
ARFGAP1-212ENST00000519604 SMARCA2P51531 1590 aa20.81■□□□□ 0.92
ARFGAP1-212ENST00000519604 CEP162Q5TB80 1403 aa20.8■□□□□ 0.92
ARFGAP1-212ENST00000519604 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
ARFGAP1-212ENST00000519604 PEG3Q9GZU2 1588 aa20.77■□□□□ 0.92
ARFGAP1-212ENST00000519604 CCDC136Q96JN2 1154 aa20.77■□□□□ 0.91
ARFGAP1-212ENST00000519604 WRNQ14191 1432 aaPredicted RBP eCLIP20.76■□□□□ 0.91
ARFGAP1-212ENST00000519604 UBE2Q2Q8WVN8 375 aa20.75■□□□□ 0.91
ARFGAP1-212ENST00000519604 SUPT16HQ9Y5B9 1047 aaKnown RBP20.75■□□□□ 0.91
ARFGAP1-212ENST00000519604 UBTFP17480 764 aaKnown RBP20.74■□□□□ 0.91
ARFGAP1-212ENST00000519604 SALL2Q9Y467 1007 aaPredicted RBP20.66■□□□□ 0.9
ARFGAP1-212ENST00000519604 TSHZ2Q9NRE2 1034 aa20.65■□□□□ 0.9
ARFGAP1-212ENST00000519604 SOGA1O94964 1423 aa20.61■□□□□ 0.89
ARFGAP1-212ENST00000519604 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
ARFGAP1-212ENST00000519604 TNIKQ9UKE5 1360 aa20.58■□□□□ 0.89
ARFGAP1-212ENST00000519604 PODXL2Q9NZ53 605 aa20.56■□□□□ 0.88
ARFGAP1-212ENST00000519604 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
ARFGAP1-212ENST00000519604 BCANQ96GW7 911 aa20.51■□□□□ 0.87
ARFGAP1-212ENST00000519604 RUSC2Q8N2Y8 1516 aa20.49■□□□□ 0.87
ARFGAP1-212ENST00000519604 PKNOX2Q96KN3 472 aa20.47■□□□□ 0.87
ARFGAP1-212ENST00000519604 BAZ1BQ9UIG0 1483 aaKnown RBP20.47■□□□□ 0.87
ARFGAP1-212ENST00000519604 RANGAP1P46060 587 aaPredicted RBP20.46■□□□□ 0.87
ARFGAP1-212ENST00000519604 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
ARFGAP1-212ENST00000519604 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.38■□□□□ 0.85
ARFGAP1-212ENST00000519604 KCNH8Q96L42 1107 aa20.38■□□□□ 0.85
ARFGAP1-212ENST00000519604 EEA1Q15075 1411 aa20.33■□□□□ 0.84
ARFGAP1-212ENST00000519604 GOLGA3Q08378 1498 aa20.33■□□□□ 0.84
ARFGAP1-212ENST00000519604 HMGXB3Q12766 1538 aa20.29■□□□□ 0.84
ARFGAP1-212ENST00000519604 FKBP8Q14318 412 aa20.28■□□□□ 0.84
ARFGAP1-212ENST00000519604 NCAPD3P42695 1498 aa20.26■□□□□ 0.83
ARFGAP1-212ENST00000519604 CLIP1P30622 1438 aa20.25■□□□□ 0.83
ARFGAP1-212ENST00000519604 SYNJ1O43426 1573 aa20.24■□□□□ 0.83
ARFGAP1-212ENST00000519604 DHX57Q6P158 1386 aaKnown RBP20.23■□□□□ 0.83
ARFGAP1-212ENST00000519604 RBM19Q9Y4C8 960 aaKnown RBP20.18■□□□□ 0.82
ARFGAP1-212ENST00000519604 ITGAEP38570 1179 aa20.18■□□□□ 0.82
ARFGAP1-212ENST00000519604 VPS8Q8N3P4 1428 aa20.16■□□□□ 0.82
ARFGAP1-212ENST00000519604 DEKP35659 375 aaKnown RBP20.16■□□□□ 0.82
ARFGAP1-212ENST00000519604 TOP2BQ02880 1626 aa20.1■□□□□ 0.81
ARFGAP1-212ENST00000519604 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
ARFGAP1-212ENST00000519604 BIVM-ERCC5R4GMW8 1640 aa20.08■□□□□ 0.8
ARFGAP1-212ENST00000519604 KIF21BO75037 1637 aa20.07■□□□□ 0.8
ARFGAP1-212ENST00000519604 NEFLP07196 543 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms