RNA–Protein interactions for RNA: ENST00000518794.6

ARFGAP1-209, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 1 (best)

Gene ARFGAP1, Length 2,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-209ENST00000518794 NISCHQ9Y2I1 1504 aa36.86■■■■□ 3.49
ARFGAP1-209ENST00000518794 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
ARFGAP1-209ENST00000518794 SUPT5HO00267 1087 aaKnown RBP31.51■■■□□ 2.64
ARFGAP1-209ENST00000518794 ZCCHC6Q5VYS8 1495 aaKnown RBP31.18■■■□□ 2.58
ARFGAP1-209ENST00000518794 DCAF8L2P0C7V8 631 aa31.04■■■□□ 2.56
ARFGAP1-209ENST00000518794 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
ARFGAP1-209ENST00000518794 MYO15BQ96JP2 1530 aa30.54■■■□□ 2.48
ARFGAP1-209ENST00000518794 CHIC1Q5VXU3 224 aa30.54■■■□□ 2.48
ARFGAP1-209ENST00000518794 DCAF1Q9Y4B6 1507 aa29.99■■■□□ 2.39
ARFGAP1-209ENST00000518794 PCGF6Q9BYE7 350 aa29.95■■■□□ 2.38
ARFGAP1-209ENST00000518794 HRCP23327 699 aa29.9■■■□□ 2.38
ARFGAP1-209ENST00000518794 LOC105371045A0A1W2PR82 267 aa29.86■■■□□ 2.37
ARFGAP1-209ENST00000518794 PPARGC1BQ86YN6 1023 aaKnown RBP29.56■■■□□ 2.32
ARFGAP1-209ENST00000518794 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
ARFGAP1-209ENST00000518794 ABCC9O60706 1549 aa29.45■■■□□ 2.3
ARFGAP1-209ENST00000518794 RSF1Q96T23 1441 aaPredicted RBP29.35■■■□□ 2.29
ARFGAP1-209ENST00000518794 FAM9AQ8IZU1 332 aaPredicted RBP29.2■■■□□ 2.26
ARFGAP1-209ENST00000518794 TRIM41Q8WV44 630 aa29.16■■■□□ 2.26
ARFGAP1-209ENST00000518794 EHMT2Q96KQ7 1210 aa29.15■■■□□ 2.26
ARFGAP1-209ENST00000518794 PELP1Q8IZL8 1130 aaKnown RBP29.14■■■□□ 2.26
ARFGAP1-209ENST00000518794 RB1CC1Q8TDY2 1594 aa29.12■■■□□ 2.25
ARFGAP1-209ENST00000518794 TRIM26Q12899 539 aaPredicted RBP29.1■■■□□ 2.25
ARFGAP1-209ENST00000518794 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.23
ARFGAP1-209ENST00000518794 MROH2BQ7Z745 1585 aa28.8■■■□□ 2.2
ARFGAP1-209ENST00000518794 NACADO15069 1562 aa28.7■■■□□ 2.19
ARFGAP1-209ENST00000518794 WIZO95785 1651 aa28.65■■■□□ 2.18
ARFGAP1-209ENST00000518794 ZEB1P37275 1124 aaPredicted RBP28.38■■■□□ 2.13
ARFGAP1-209ENST00000518794 BAZ1AQ9NRL2 1556 aaPredicted RBP28.31■■■□□ 2.12
ARFGAP1-209ENST00000518794 SCAF1Q9H7N4 1312 aaKnown RBP28.27■■■□□ 2.12
ARFGAP1-209ENST00000518794 TTBK1Q5TCY1 1321 aaPredicted RBP28.22■■■□□ 2.11
ARFGAP1-209ENST00000518794 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
ARFGAP1-209ENST00000518794 EIF4G1Q04637 1599 aaKnown RBP28.18■■■□□ 2.1
ARFGAP1-209ENST00000518794 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.15■■■□□ 2.1
ARFGAP1-209ENST00000518794 MYT1Q01538 1121 aa28.12■■■□□ 2.09
ARFGAP1-209ENST00000518794 CCDC88BA6NC98 1476 aa28.11■■■□□ 2.09
ARFGAP1-209ENST00000518794 TOP2AP11388 1531 aaKnown RBP28.04■■■□□ 2.08
ARFGAP1-209ENST00000518794 SMARCA4P51532 1647 aa28.02■■■□□ 2.08
ARFGAP1-209ENST00000518794 PABPN1Q86U42 306 aaKnown RBP eCLIP27.99■■■□□ 2.072e-11■■■□□ 17.2
ARFGAP1-209ENST00000518794 CCER1Q8TC90 406 aaPredicted RBP27.98■■■□□ 2.07
ARFGAP1-209ENST00000518794 SOGA1O94964 1423 aa27.97■■■□□ 2.07
ARFGAP1-209ENST00000518794 SMARCA2P51531 1590 aa27.96■■■□□ 2.07
ARFGAP1-209ENST00000518794 UNC13AQ9UPW8 1703 aa27.9■■■□□ 2.06
ARFGAP1-209ENST00000518794 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
ARFGAP1-209ENST00000518794 CEP162Q5TB80 1403 aa27.85■■■□□ 2.05
ARFGAP1-209ENST00000518794 UBTFP17480 764 aaKnown RBP27.82■■■□□ 2.04
ARFGAP1-209ENST00000518794 CSRNP3Q8WYN3 585 aa27.76■■■□□ 2.03
ARFGAP1-209ENST00000518794 WRNQ14191 1432 aaPredicted RBP eCLIP27.68■■■□□ 2.02
ARFGAP1-209ENST00000518794 TNIKQ9UKE5 1360 aa27.68■■■□□ 2.02
ARFGAP1-209ENST00000518794 BICRAQ9NZM4 1560 aa27.59■■■□□ 2.01
ARFGAP1-209ENST00000518794 EEA1Q15075 1411 aa27.51■■□□□ 1.99
ARFGAP1-209ENST00000518794 RANGAP1P46060 587 aaPredicted RBP27.5■■□□□ 1.99
ARFGAP1-209ENST00000518794 DIEXFQ68CQ4 756 aaKnown RBP27.5■■□□□ 1.99
ARFGAP1-209ENST00000518794 GOLGA3Q08378 1498 aa27.49■■□□□ 1.99
ARFGAP1-209ENST00000518794 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
ARFGAP1-209ENST00000518794 NEUROD1Q13562 356 aa27.43■■□□□ 1.98
ARFGAP1-209ENST00000518794 HNRNPUL2Q1KMD3 747 aaKnown RBP27.41■■□□□ 1.98
ARFGAP1-209ENST00000518794 ACIN1Q9UKV3 1341 aaKnown RBP27.35■■□□□ 1.97
ARFGAP1-209ENST00000518794 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
ARFGAP1-209ENST00000518794 PEG3Q9GZU2 1588 aa27.31■■□□□ 1.96
ARFGAP1-209ENST00000518794 CEP164Q9UPV0 1460 aa27.29■■□□□ 1.96
ARFGAP1-209ENST00000518794 CLIP1P30622 1438 aa27.28■■□□□ 1.96
ARFGAP1-209ENST00000518794 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
ARFGAP1-209ENST00000518794 RAPGEF2Q9Y4G8 1499 aa27.23■■□□□ 1.95
ARFGAP1-209ENST00000518794 GTF3C3Q9Y5Q9 886 aa27.21■■□□□ 1.95
ARFGAP1-209ENST00000518794 ZNF316A6NFI3 1004 aaPredicted RBP27.18■■□□□ 1.94
ARFGAP1-209ENST00000518794 KIF21BO75037 1637 aa27.17■■□□□ 1.94
ARFGAP1-209ENST00000518794 APLP2Q06481 763 aa27.12■■□□□ 1.93
ARFGAP1-209ENST00000518794 VPS8Q8N3P4 1428 aa27.12■■□□□ 1.93
ARFGAP1-209ENST00000518794 YTHDC1Q96MU7 727 aaKnown RBP27.09■■□□□ 1.93
ARFGAP1-209ENST00000518794 CENPBP07199 599 aaPredicted RBP27.08■■□□□ 1.93
ARFGAP1-209ENST00000518794 MIER1Q8N108 512 aa26.96■■□□□ 1.91
ARFGAP1-209ENST00000518794 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
ARFGAP1-209ENST00000518794 KANK4Q5T7N3 995 aaPredicted RBP26.88■■□□□ 1.89
ARFGAP1-209ENST00000518794 ARAP1Q96P48 1450 aa26.8■■□□□ 1.88
ARFGAP1-209ENST00000518794 PRXQ9BXM0 1461 aa26.79■■□□□ 1.88
ARFGAP1-209ENST00000518794 BIVM-ERCC5R4GMW8 1640 aa26.77■■□□□ 1.88
ARFGAP1-209ENST00000518794 CUX1P39880 1505 aa26.76■■□□□ 1.87
ARFGAP1-209ENST00000518794 ITGAEP38570 1179 aa26.68■■□□□ 1.86
ARFGAP1-209ENST00000518794 ERICH3Q5RHP9 1530 aa26.68■■□□□ 1.86
ARFGAP1-209ENST00000518794 DHX57Q6P158 1386 aaKnown RBP26.67■■□□□ 1.86
ARFGAP1-209ENST00000518794 NCAPD3P42695 1498 aa26.65■■□□□ 1.86
ARFGAP1-209ENST00000518794 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
ARFGAP1-209ENST00000518794 HMGXB3Q12766 1538 aa26.58■■□□□ 1.85
ARFGAP1-209ENST00000518794 CFTRP13569 1480 aa26.54■■□□□ 1.84
ARFGAP1-209ENST00000518794 ARHGAP35Q9NRY4 1499 aa26.54■■□□□ 1.84
ARFGAP1-209ENST00000518794 RRBP1Q9P2E9 1410 aaKnown RBP26.47■■□□□ 1.83
ARFGAP1-209ENST00000518794 BCL11AQ9H165 835 aa26.46■■□□□ 1.83
ARFGAP1-209ENST00000518794 CUX2O14529 1486 aa26.45■■□□□ 1.83
ARFGAP1-209ENST00000518794 CCNB3Q8WWL7 1395 aa26.45■■□□□ 1.83
ARFGAP1-209ENST00000518794 CLSPNQ9HAW4 1339 aa26.43■■□□□ 1.82
ARFGAP1-209ENST00000518794 IGF1RP08069 1367 aa26.41■■□□□ 1.82
ARFGAP1-209ENST00000518794 P3H3Q8IVL6 736 aa26.39■■□□□ 1.82
ARFGAP1-209ENST00000518794 ATP1B4Q9UN42 357 aaPredicted RBP26.34■■□□□ 1.81
ARFGAP1-209ENST00000518794 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
ARFGAP1-209ENST00000518794 RAB3GAP2Q9H2M9 1393 aa26.3■■□□□ 1.8
ARFGAP1-209ENST00000518794 FGD5Q6ZNL6 1462 aa26.27■■□□□ 1.8
ARFGAP1-209ENST00000518794 FAM50AQ14320 339 aaKnown RBP26.26■■□□□ 1.79
ARFGAP1-209ENST00000518794 CADPSQ9ULU8 1353 aa26.26■■□□□ 1.79
ARFGAP1-209ENST00000518794 PHLDB1Q86UU1 1377 aa26.22■■□□□ 1.79
ARFGAP1-209ENST00000518794 KCNH8Q96L42 1107 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms