RNA–Protein interactions for RNA: ENST00000367538.1

SMG7-203, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG7, Length 328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-203ENST00000367538 NISCHQ9Y2I1 1504 aa46.87■■■■■ 5.09
SMG7-203ENST00000367538 ABCC9O60706 1549 aa42.28■■■■■ 4.36
SMG7-203ENST00000367538 CCDC180Q9P1Z9 1646 aa42.21■■■■■ 4.35
SMG7-203ENST00000367538 RB1CC1Q8TDY2 1594 aa40.27■■■■■ 4.04
SMG7-203ENST00000367538 NACADO15069 1562 aa39.97■■■■□ 3.99
SMG7-203ENST00000367538 DNAJC5BQ9UF47 199 aa39.79■■■■□ 3.96
SMG7-203ENST00000367538 DCAF8L2P0C7V8 631 aa39.5■■■■□ 3.91
SMG7-203ENST00000367538 MYO15BQ96JP2 1530 aa39.42■■■■□ 3.9
SMG7-203ENST00000367538 PABPN1Q86U42 306 aaKnown RBP eCLIP39.27■■■■□ 3.88
SMG7-203ENST00000367538 UNC13AQ9UPW8 1703 aa39.25■■■■□ 3.87
SMG7-203ENST00000367538 BICRAQ9NZM4 1560 aa39.03■■■■□ 3.84
SMG7-203ENST00000367538 ZCCHC6Q5VYS8 1495 aaKnown RBP38.82■■■■□ 3.81
SMG7-203ENST00000367538 DCAF1Q9Y4B6 1507 aa38.8■■■■□ 3.8
SMG7-203ENST00000367538 SHROOM4Q9ULL8 1493 aa38.69■■■■□ 3.78
SMG7-203ENST00000367538 SCRIBQ14160 1630 aa38.32■■■■□ 3.73
SMG7-203ENST00000367538 CC2D2AQ9P2K1 1620 aa38.23■■■■□ 3.71
SMG7-203ENST00000367538 CECR2Q9BXF3 1484 aa38.17■■■■□ 3.7
SMG7-203ENST00000367538 EIF4G1Q04637 1599 aaKnown RBP38.12■■■■□ 3.69
SMG7-203ENST00000367538 NCAPD3P42695 1498 aa36.88■■■■□ 3.5
SMG7-203ENST00000367538 DNAJC5Q9H3Z4 198 aa36.82■■■■□ 3.48
SMG7-203ENST00000367538 ATAD2BQ9ULI0 1458 aa36.7■■■■□ 3.47
SMG7-203ENST00000367538 CUX2O14529 1486 aa36.67■■■■□ 3.46
SMG7-203ENST00000367538 SMARCA2P51531 1590 aa36.64■■■■□ 3.46
SMG7-203ENST00000367538 HMGXB3Q12766 1538 aa36.61■■■■□ 3.45
SMG7-203ENST00000367538 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
SMG7-203ENST00000367538 ERCC6Q03468 1493 aa36.58■■■■□ 3.45
SMG7-203ENST00000367538 BAZ1AQ9NRL2 1556 aaPredicted RBP36.44■■■■□ 3.42
SMG7-203ENST00000367538 BAZ1BQ9UIG0 1483 aaKnown RBP36.34■■■■□ 3.41
SMG7-203ENST00000367538 PEG3Q9GZU2 1588 aa36.32■■■■□ 3.4
SMG7-203ENST00000367538 NESP48681 1621 aa36.23■■■■□ 3.39
SMG7-203ENST00000367538 LAMC3Q9Y6N6 1575 aa36.09■■■■□ 3.37
SMG7-203ENST00000367538 MROH2BQ7Z745 1585 aa36.06■■■■□ 3.36
SMG7-203ENST00000367538 THOC2Q8NI27 1593 aaKnown RBP36■■■■□ 3.35
SMG7-203ENST00000367538 PDS5BQ9NTI5 1447 aa35.9■■■■□ 3.34
SMG7-203ENST00000367538 KIF21AQ7Z4S6 1674 aa35.79■■■■□ 3.32
SMG7-203ENST00000367538 CADPSQ9ULU8 1353 aa35.73■■■■□ 3.31
SMG7-203ENST00000367538 WIZO95785 1651 aa35.59■■■■□ 3.29
SMG7-203ENST00000367538 MRC2Q9UBG0 1479 aa35.56■■■■□ 3.28
SMG7-203ENST00000367538 WDR62O43379 1518 aa35.49■■■■□ 3.27
SMG7-203ENST00000367538 CEP164Q9UPV0 1460 aa35.38■■■■□ 3.25
SMG7-203ENST00000367538 FANCD2Q9BXW9 1451 aa35.3■■■■□ 3.24
SMG7-203ENST00000367538 CFTRP13569 1480 aa35.29■■■■□ 3.24
SMG7-203ENST00000367538 RSF1Q96T23 1441 aaPredicted RBP35.25■■■■□ 3.23
SMG7-203ENST00000367538 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
SMG7-203ENST00000367538 TRIM41Q8WV44 630 aa35.01■■■■□ 3.2
SMG7-203ENST00000367538 URB2Q14146 1524 aaKnown RBP35■■■■□ 3.19
SMG7-203ENST00000367538 PRDM2Q13029 1718 aa34.9■■■■□ 3.18
SMG7-203ENST00000367538 OSCARQ8IYS5 282 aa34.89■■■■□ 3.18
SMG7-203ENST00000367538 CCDC88BA6NC98 1476 aa34.77■■■■□ 3.16
SMG7-203ENST00000367538 IFT140Q96RY7 1462 aa34.71■■■■□ 3.15
SMG7-203ENST00000367538 ABCC8Q09428 1581 aa34.62■■■■□ 3.13
SMG7-203ENST00000367538 TOPBP1Q92547 1522 aa34.6■■■■□ 3.13
SMG7-203ENST00000367538 ZNF608Q9ULD9 1512 aaPredicted RBP34.57■■■■□ 3.12
SMG7-203ENST00000367538 DNMBPQ6XZF7 1577 aa34.49■■■■□ 3.11
SMG7-203ENST00000367538 RIMBP3CA6NJZ7 1639 aa34.43■■■■□ 3.1
SMG7-203ENST00000367538 RIMBP3BA6NNM3 1639 aa34.43■■■■□ 3.1
SMG7-203ENST00000367538 RIMBP3Q9UFD9 1639 aa34.43■■■■□ 3.1
SMG7-203ENST00000367538 EIF4G3O43432 1585 aaKnown RBP34.41■■■■□ 3.1
SMG7-203ENST00000367538 ARHGEF11O15085 1522 aa34.33■■■■□ 3.09
SMG7-203ENST00000367538 TARBP1Q13395 1621 aaKnown RBP34.31■■■■□ 3.08
SMG7-203ENST00000367538 POLA1P09884 1462 aaPredicted RBP34.24■■■■□ 3.07
SMG7-203ENST00000367538 AQRO60306 1485 aaKnown RBP eCLIP34.23■■■■□ 3.071e-6■■■■■ 35
SMG7-203ENST00000367538 CHD1O14646 1710 aa34.16■■■■□ 3.06
SMG7-203ENST00000367538 WDR97A6NE52 1622 aa34.08■■■■□ 3.05
SMG7-203ENST00000367538 SOGA1O94964 1423 aa34.07■■■■□ 3.04
SMG7-203ENST00000367538 RAD54L2Q9Y4B4 1467 aa34.05■■■■□ 3.04
SMG7-203ENST00000367538 FBLN2P98095 1184 aa34.02■■■■□ 3.04
SMG7-203ENST00000367538 CYB5RLQ6IPT4 315 aa34.02■■■■□ 3.04
SMG7-203ENST00000367538 TDRD9Q8NDG6 1382 aaKnown RBP33.98■■■■□ 3.03
SMG7-203ENST00000367538 FGD5Q6ZNL6 1462 aa33.97■■■■□ 3.03
SMG7-203ENST00000367538 ARAP1Q96P48 1450 aa33.96■■■■□ 3.03
SMG7-203ENST00000367538 SNAPC4Q5SXM2 1469 aa33.91■■■■□ 3.02
SMG7-203ENST00000367538 CUX1P39880 1505 aa33.9■■■■□ 3.02
SMG7-203ENST00000367538 MAGI1Q96QZ7 1491 aaPredicted RBP33.89■■■■□ 3.02
SMG7-203ENST00000367538 GRIN2BQ13224 1484 aa33.84■■■■□ 3.01
SMG7-203ENST00000367538 CLASP1Q7Z460 1538 aa33.83■■■■□ 3.01
SMG7-203ENST00000367538 SYNJ1O43426 1573 aa33.81■■■■□ 3
SMG7-203ENST00000367538 CHMP7Q8WUX9 453 aaPredicted RBP33.8■■■■□ 3
SMG7-203ENST00000367538 SYNJ2O15056 1496 aa33.76■■■□□ 2.99
SMG7-203ENST00000367538 TRHP20396 242 aaPredicted RBP33.71■■■□□ 2.99
SMG7-203ENST00000367538 GAPVD1Q14C86 1478 aa33.67■■■□□ 2.98
SMG7-203ENST00000367538 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
SMG7-203ENST00000367538 ABCA10Q8WWZ4 1543 aa33.63■■■□□ 2.97
SMG7-203ENST00000367538 ABCA5Q8WWZ7 1642 aa33.58■■■□□ 2.97
SMG7-203ENST00000367538 WRNQ14191 1432 aaPredicted RBP eCLIP33.45■■■□□ 2.95
SMG7-203ENST00000367538 SUPT5HO00267 1087 aaKnown RBP33.42■■■□□ 2.94
SMG7-203ENST00000367538 GRIN2AQ12879 1464 aa33.38■■■□□ 2.93
SMG7-203ENST00000367538 TOP2BQ02880 1626 aa33.35■■■□□ 2.93
SMG7-203ENST00000367538 BIVM-ERCC5R4GMW8 1640 aa33.35■■■□□ 2.93
SMG7-203ENST00000367538 ADAMTS12P58397 1594 aa33.34■■■□□ 2.93
SMG7-203ENST00000367538 NUP160Q12769 1436 aa33.31■■■□□ 2.92
SMG7-203ENST00000367538 FHAD1B1AJZ9 1412 aa33.27■■■□□ 2.92
SMG7-203ENST00000367538 CEP170Q5SW79 1584 aa33.24■■■□□ 2.91
SMG7-203ENST00000367538 ERICH3Q5RHP9 1530 aa33.23■■■□□ 2.91
SMG7-203ENST00000367538 ERCC6L2Q5T890 1561 aa33.18■■■□□ 2.9
SMG7-203ENST00000367538 SHROOM2Q13796 1616 aa33.17■■■□□ 2.9
SMG7-203ENST00000367538 PRG4Q92954 1404 aaPredicted RBP32.95■■■□□ 2.87
SMG7-203ENST00000367538 AEBP2Q6ZN18 517 aaPredicted RBP32.93■■■□□ 2.86
SMG7-203ENST00000367538 JPH4Q96JJ6 628 aa32.92■■■□□ 2.86
SMG7-203ENST00000367538 RUSC2Q8N2Y8 1516 aa32.87■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms