RNA–Protein interactions for RNA: ENST00000638826.1

SMG7-216, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG7, Length 219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-216ENST00000638826 NISCHQ9Y2I1 1504 aa20.93■□□□□ 0.94
SMG7-216ENST00000638826 ABCC9O60706 1549 aa18.91■□□□□ 0.62
SMG7-216ENST00000638826 CCDC180Q9P1Z9 1646 aa18.76■□□□□ 0.59
SMG7-216ENST00000638826 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
SMG7-216ENST00000638826 NACADO15069 1562 aa17.84■□□□□ 0.45
SMG7-216ENST00000638826 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.44
SMG7-216ENST00000638826 DCAF8L2P0C7V8 631 aa17.76■□□□□ 0.43
SMG7-216ENST00000638826 PABPN1Q86U42 306 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMG7-216ENST00000638826 MYO15BQ96JP2 1530 aa17.6■□□□□ 0.41
SMG7-216ENST00000638826 BICRAQ9NZM4 1560 aa17.37■□□□□ 0.37
SMG7-216ENST00000638826 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.37
SMG7-216ENST00000638826 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
SMG7-216ENST00000638826 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
SMG7-216ENST00000638826 SHROOM4Q9ULL8 1493 aa17.3■□□□□ 0.36
SMG7-216ENST00000638826 CECR2Q9BXF3 1484 aa17.09■□□□□ 0.33
SMG7-216ENST00000638826 SCRIBQ14160 1630 aa17.08■□□□□ 0.32
SMG7-216ENST00000638826 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
SMG7-216ENST00000638826 EIF4G1Q04637 1599 aaKnown RBP17.01■□□□□ 0.31
SMG7-216ENST00000638826 DNAJC5Q9H3Z4 198 aa16.53■□□□□ 0.24
SMG7-216ENST00000638826 NCAPD3P42695 1498 aa16.5■□□□□ 0.23
SMG7-216ENST00000638826 CUX2O14529 1486 aa16.41■□□□□ 0.22
SMG7-216ENST00000638826 ATAD2BQ9ULI0 1458 aa16.41■□□□□ 0.22
SMG7-216ENST00000638826 ERCC6Q03468 1493 aa16.4■□□□□ 0.22
SMG7-216ENST00000638826 SMARCA2P51531 1590 aa16.37■□□□□ 0.21
SMG7-216ENST00000638826 HMGXB3Q12766 1538 aa16.33■□□□□ 0.2
SMG7-216ENST00000638826 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
SMG7-216ENST00000638826 BAZ1AQ9NRL2 1556 aaPredicted RBP16.26■□□□□ 0.19
SMG7-216ENST00000638826 BAZ1BQ9UIG0 1483 aaKnown RBP16.25■□□□□ 0.19
SMG7-216ENST00000638826 NESP48681 1621 aa16.18■□□□□ 0.18
SMG7-216ENST00000638826 PEG3Q9GZU2 1588 aa16.17■□□□□ 0.18
SMG7-216ENST00000638826 LAMC3Q9Y6N6 1575 aa16.1■□□□□ 0.17
SMG7-216ENST00000638826 PDS5BQ9NTI5 1447 aa16.1■□□□□ 0.17
SMG7-216ENST00000638826 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
SMG7-216ENST00000638826 THOC2Q8NI27 1593 aaKnown RBP16.02■□□□□ 0.16
SMG7-216ENST00000638826 CADPSQ9ULU8 1353 aa16■□□□□ 0.15
SMG7-216ENST00000638826 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
SMG7-216ENST00000638826 KIF21AQ7Z4S6 1674 aa15.88■□□□□ 0.13
SMG7-216ENST00000638826 WDR62O43379 1518 aa15.84■□□□□ 0.13
SMG7-216ENST00000638826 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.12
SMG7-216ENST00000638826 WIZO95785 1651 aa15.82■□□□□ 0.12
SMG7-216ENST00000638826 FANCD2Q9BXW9 1451 aa15.79■□□□□ 0.12
SMG7-216ENST00000638826 CFTRP13569 1480 aa15.78■□□□□ 0.12
SMG7-216ENST00000638826 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.11
SMG7-216ENST00000638826 TRIM41Q8WV44 630 aa15.74■□□□□ 0.11
SMG7-216ENST00000638826 TOP2AP11388 1531 aaKnown RBP15.71■□□□□ 0.11
SMG7-216ENST00000638826 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
SMG7-216ENST00000638826 URB2Q14146 1524 aaKnown RBP15.63■□□□□ 0.09
SMG7-216ENST00000638826 CCDC88BA6NC98 1476 aa15.53■□□□□ 0.08
SMG7-216ENST00000638826 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
SMG7-216ENST00000638826 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
SMG7-216ENST00000638826 TOPBP1Q92547 1522 aa15.45■□□□□ 0.06
SMG7-216ENST00000638826 ZNF608Q9ULD9 1512 aaPredicted RBP15.44■□□□□ 0.06
SMG7-216ENST00000638826 PRDM2Q13029 1718 aa15.4■□□□□ 0.06
SMG7-216ENST00000638826 DNMBPQ6XZF7 1577 aa15.38■□□□□ 0.05
SMG7-216ENST00000638826 ARHGEF11O15085 1522 aa15.34■□□□□ 0.05
SMG7-216ENST00000638826 RIMBP3CA6NJZ7 1639 aa15.34■□□□□ 0.05
SMG7-216ENST00000638826 RIMBP3BA6NNM3 1639 aa15.34■□□□□ 0.05
SMG7-216ENST00000638826 RIMBP3Q9UFD9 1639 aa15.34■□□□□ 0.05
SMG7-216ENST00000638826 AQRO60306 1485 aaKnown RBP eCLIP15.33■□□□□ 0.041e-6■■■■■ 35
SMG7-216ENST00000638826 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
SMG7-216ENST00000638826 POLA1P09884 1462 aaPredicted RBP15.3■□□□□ 0.04
SMG7-216ENST00000638826 FBLN2P98095 1184 aa15.3■□□□□ 0.04
SMG7-216ENST00000638826 CYB5RLQ6IPT4 315 aa15.29■□□□□ 0.04
SMG7-216ENST00000638826 TARBP1Q13395 1621 aaKnown RBP15.27■□□□□ 0.03
SMG7-216ENST00000638826 SOGA1O94964 1423 aa15.26■□□□□ 0.03
SMG7-216ENST00000638826 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
SMG7-216ENST00000638826 RAD54L2Q9Y4B4 1467 aa15.22■□□□□ 0.03
SMG7-216ENST00000638826 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
SMG7-216ENST00000638826 WDR97A6NE52 1622 aa15.19■□□□□ 0.02
SMG7-216ENST00000638826 FGD5Q6ZNL6 1462 aa15.18■□□□□ 0.02
SMG7-216ENST00000638826 ARAP1Q96P48 1450 aa15.18■□□□□ 0.02
SMG7-216ENST00000638826 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
SMG7-216ENST00000638826 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
SMG7-216ENST00000638826 MAGI1Q96QZ7 1491 aaPredicted RBP15.16■□□□□ 0.02
SMG7-216ENST00000638826 GRIN2BQ13224 1484 aa15.15■□□□□ 0.02
SMG7-216ENST00000638826 CHD1O14646 1710 aa15.14■□□□□ 0.01
SMG7-216ENST00000638826 CUX1P39880 1505 aa15.12■□□□□ 0.01
SMG7-216ENST00000638826 SYNJ1O43426 1573 aa15.11■□□□□ 0.01
SMG7-216ENST00000638826 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
SMG7-216ENST00000638826 CLASP1Q7Z460 1538 aa15.08■□□□□ 0.01
SMG7-216ENST00000638826 GAPVD1Q14C86 1478 aa15.07■□□□□ 0
SMG7-216ENST00000638826 ABCA10Q8WWZ4 1543 aa15.02■□□□□ -0
SMG7-216ENST00000638826 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
SMG7-216ENST00000638826 WRNQ14191 1432 aaPredicted RBP eCLIP14.99□□□□□ -0.01
SMG7-216ENST00000638826 ABCA5Q8WWZ7 1642 aa14.95□□□□□ -0.02
SMG7-216ENST00000638826 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
SMG7-216ENST00000638826 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
SMG7-216ENST00000638826 FHAD1B1AJZ9 1412 aa14.9□□□□□ -0.02
SMG7-216ENST00000638826 NUP160Q12769 1436 aa14.9□□□□□ -0.02
SMG7-216ENST00000638826 ADAMTS12P58397 1594 aa14.85□□□□□ -0.03
SMG7-216ENST00000638826 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
SMG7-216ENST00000638826 AEBP2Q6ZN18 517 aaPredicted RBP14.84□□□□□ -0.03
SMG7-216ENST00000638826 ERICH3Q5RHP9 1530 aa14.83□□□□□ -0.04
SMG7-216ENST00000638826 CEP170Q5SW79 1584 aa14.81□□□□□ -0.04
SMG7-216ENST00000638826 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
SMG7-216ENST00000638826 ERCC6L2Q5T890 1561 aa14.79□□□□□ -0.04
SMG7-216ENST00000638826 JPH4Q96JJ6 628 aa14.78□□□□□ -0.04
SMG7-216ENST00000638826 PRG4Q92954 1404 aaPredicted RBP14.76□□□□□ -0.05
SMG7-216ENST00000638826 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
SMG7-216ENST00000638826 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms