RNA–Protein interactions for RNA: ENST00000542675.1

PDE3A-202, Transcript of phosphodiesterase 3A, humanhuman

TSL 3

Gene PDE3A, Length 685 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-202ENST00000542675 AEBP2Q6ZN18 517 aaPredicted RBP32.64■■■□□ 2.82
PDE3A-202ENST00000542675 CHIC1Q5VXU3 224 aa31.3■■■□□ 2.6
PDE3A-202ENST00000542675 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.42
PDE3A-202ENST00000542675 PHF23Q9BUL5 403 aaPredicted RBP27.59■■■□□ 2.01
PDE3A-202ENST00000542675 SENP3Q9H4L4 574 aaPredicted RBP27.58■■■□□ 2.01
PDE3A-202ENST00000542675 ABCC9O60706 1549 aa27.55■■■□□ 2
PDE3A-202ENST00000542675 CCDC180Q9P1Z9 1646 aa27.22■■□□□ 1.95
PDE3A-202ENST00000542675 DNAJC5BQ9UF47 199 aa26.15■■□□□ 1.78
PDE3A-202ENST00000542675 RB1CC1Q8TDY2 1594 aa26.02■■□□□ 1.76
PDE3A-202ENST00000542675 FOXD1Q16676 465 aa25.78■■□□□ 1.72
PDE3A-202ENST00000542675 NACADO15069 1562 aa25.75■■□□□ 1.71
PDE3A-202ENST00000542675 DCAF8L2P0C7V8 631 aa25.66■■□□□ 1.7
PDE3A-202ENST00000542675 UNC13AQ9UPW8 1703 aa25.65■■□□□ 1.7
PDE3A-202ENST00000542675 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.695e-15■■■■□ 20.8
PDE3A-202ENST00000542675 BICRAQ9NZM4 1560 aa25.38■■□□□ 1.65
PDE3A-202ENST00000542675 MYO15BQ96JP2 1530 aa25.24■■□□□ 1.63
PDE3A-202ENST00000542675 PLPPR3Q6T4P5 718 aa25.13■■□□□ 1.61
PDE3A-202ENST00000542675 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
PDE3A-202ENST00000542675 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
PDE3A-202ENST00000542675 SCRIBQ14160 1630 aa24.87■■□□□ 1.57
PDE3A-202ENST00000542675 DCAF1Q9Y4B6 1507 aa24.85■■□□□ 1.57
PDE3A-202ENST00000542675 CECR2Q9BXF3 1484 aa24.79■■□□□ 1.56
PDE3A-202ENST00000542675 SHROOM4Q9ULL8 1493 aa24.78■■□□□ 1.56
PDE3A-202ENST00000542675 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
PDE3A-202ENST00000542675 PPP6R1Q9UPN7 881 aa24.51■■□□□ 1.51
PDE3A-202ENST00000542675 ADRA2BP18089 450 aa24.43■■□□□ 1.5
PDE3A-202ENST00000542675 PIAS4Q8N2W9 510 aaPredicted RBP24.15■■□□□ 1.46
PDE3A-202ENST00000542675 DNAJC5Q9H3Z4 198 aa24.09■■□□□ 1.45
PDE3A-202ENST00000542675 MSH5O43196 834 aa23.8■■□□□ 1.4
PDE3A-202ENST00000542675 NCAPD3P42695 1498 aa23.77■■□□□ 1.4
PDE3A-202ENST00000542675 CUX2O14529 1486 aa23.75■■□□□ 1.39
PDE3A-202ENST00000542675 ERCC6Q03468 1493 aa23.73■■□□□ 1.39
PDE3A-202ENST00000542675 ATAD2BQ9ULI0 1458 aa23.71■■□□□ 1.39
PDE3A-202ENST00000542675 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
PDE3A-202ENST00000542675 NESP48681 1621 aa23.63■■□□□ 1.37
PDE3A-202ENST00000542675 HMGXB3Q12766 1538 aa23.59■■□□□ 1.37
PDE3A-202ENST00000542675 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
PDE3A-202ENST00000542675 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
PDE3A-202ENST00000542675 BAZ1AQ9NRL2 1556 aaPredicted RBP23.43■■□□□ 1.34
PDE3A-202ENST00000542675 THOC2Q8NI27 1593 aaKnown RBP23.41■■□□□ 1.34
PDE3A-202ENST00000542675 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
PDE3A-202ENST00000542675 KIF21AQ7Z4S6 1674 aa23.35■■□□□ 1.33
PDE3A-202ENST00000542675 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
PDE3A-202ENST00000542675 LAMC3Q9Y6N6 1575 aa23.3■■□□□ 1.32
PDE3A-202ENST00000542675 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
PDE3A-202ENST00000542675 WIZO95785 1651 aa23.09■■□□□ 1.29
PDE3A-202ENST00000542675 CADPSQ9ULU8 1353 aa23.04■■□□□ 1.28
PDE3A-202ENST00000542675 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
PDE3A-202ENST00000542675 TRIM41Q8WV44 630 aa22.99■■□□□ 1.27
PDE3A-202ENST00000542675 WDR62O43379 1518 aa22.97■■□□□ 1.27
PDE3A-202ENST00000542675 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
PDE3A-202ENST00000542675 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
PDE3A-202ENST00000542675 CFTRP13569 1480 aa22.73■■□□□ 1.23
PDE3A-202ENST00000542675 URB2Q14146 1524 aaKnown RBP22.7■■□□□ 1.22
PDE3A-202ENST00000542675 RSF1Q96T23 1441 aaPredicted RBP22.69■■□□□ 1.22
PDE3A-202ENST00000542675 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
PDE3A-202ENST00000542675 POTEDQ86YR6 584 aa22.63■■□□□ 1.21
PDE3A-202ENST00000542675 OSCARQ8IYS5 282 aa22.62■■□□□ 1.21
PDE3A-202ENST00000542675 PRDM2Q13029 1718 aa22.61■■□□□ 1.21
PDE3A-202ENST00000542675 ZNF608Q9ULD9 1512 aaPredicted RBP22.48■■□□□ 1.19
PDE3A-202ENST00000542675 RIMBP3CA6NJZ7 1639 aa22.48■■□□□ 1.19
PDE3A-202ENST00000542675 RIMBP3BA6NNM3 1639 aa22.48■■□□□ 1.19
PDE3A-202ENST00000542675 RIMBP3Q9UFD9 1639 aa22.48■■□□□ 1.19
PDE3A-202ENST00000542675 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.18
PDE3A-202ENST00000542675 IFT140Q96RY7 1462 aa22.38■■□□□ 1.17
PDE3A-202ENST00000542675 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
PDE3A-202ENST00000542675 ARHGEF11O15085 1522 aa22.33■■□□□ 1.17
PDE3A-202ENST00000542675 MAPK8IP2Q13387 824 aaPredicted RBP22.33■■□□□ 1.17
PDE3A-202ENST00000542675 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.16
PDE3A-202ENST00000542675 CHD1O14646 1710 aa22.29■■□□□ 1.16
PDE3A-202ENST00000542675 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
PDE3A-202ENST00000542675 TARBP1Q13395 1621 aaKnown RBP22.24■■□□□ 1.15
PDE3A-202ENST00000542675 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
PDE3A-202ENST00000542675 ABCC8Q09428 1581 aa22.19■■□□□ 1.14
PDE3A-202ENST00000542675 CYB5RLQ6IPT4 315 aa22.18■■□□□ 1.14
PDE3A-202ENST00000542675 PPP4R3CPQ6ZMV5 832 aa22.15■■□□□ 1.14
PDE3A-202ENST00000542675 POLA1P09884 1462 aaPredicted RBP22.13■■□□□ 1.13
PDE3A-202ENST00000542675 ARAP1Q96P48 1450 aa22.11■■□□□ 1.13
PDE3A-202ENST00000542675 FBLN2P98095 1184 aa22.11■■□□□ 1.13
PDE3A-202ENST00000542675 RAD54L2Q9Y4B4 1467 aa22.1■■□□□ 1.13
PDE3A-202ENST00000542675 SCAF1Q9H7N4 1312 aaKnown RBP22.09■■□□□ 1.13
PDE3A-202ENST00000542675 TDRD9Q8NDG6 1382 aaKnown RBP22.03■■□□□ 1.12
PDE3A-202ENST00000542675 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
PDE3A-202ENST00000542675 SOGA1O94964 1423 aa21.99■■□□□ 1.11
PDE3A-202ENST00000542675 DMRT2Q9Y5R5 561 aa21.99■■□□□ 1.11
PDE3A-202ENST00000542675 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
PDE3A-202ENST00000542675 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
PDE3A-202ENST00000542675 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
PDE3A-202ENST00000542675 CUX1P39880 1505 aa21.92■■□□□ 1.1
PDE3A-202ENST00000542675 WDR97A6NE52 1622 aa21.87■■□□□ 1.09
PDE3A-202ENST00000542675 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
PDE3A-202ENST00000542675 CHMP7Q8WUX9 453 aaPredicted RBP21.84■■□□□ 1.09
PDE3A-202ENST00000542675 PBRM1Q86U86 1689 aa21.84■■□□□ 1.09
PDE3A-202ENST00000542675 MAGI1Q96QZ7 1491 aaPredicted RBP21.83■■□□□ 1.08
PDE3A-202ENST00000542675 GRIN2BQ13224 1484 aa21.82■■□□□ 1.08
PDE3A-202ENST00000542675 SYNJ2O15056 1496 aa21.77■■□□□ 1.08
PDE3A-202ENST00000542675 GAPVD1Q14C86 1478 aa21.73■■□□□ 1.07
PDE3A-202ENST00000542675 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
PDE3A-202ENST00000542675 ERCC6L2Q5T890 1561 aa21.67■■□□□ 1.06
PDE3A-202ENST00000542675 ABCA10Q8WWZ4 1543 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms